Daisuke Kohda

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 21

Top Topics

Molecular Dynamics Simulations

Decision Making

Top Venues

The journal of physical chemistry letters

Biophysical reviews

Communications biology

This page only lists publications with an associated author ORCID identifier.

Publications

Honoka Kawamukai, Shumpei Takishita, Kazumi Shimizu, Daisuke Kohda, Koichiro Ishimori, Tomohide Saio
Conformational Distribution of a Multidomain Protein Measured by Single-Pair Small-Angle X-ray Scattering. The journal of physical chemistry letters (2024)
Honoka Kawamukai, Shumpei Takishita, Kazumi Shimizu, Daisuke Kohda, Koichiro Ishimori, Tomohide Saio
Conformational Distribution of a Multidomain Protein Measured by Single-Pair Small-Angle X-ray Scattering. The journal of physical chemistry letters 15 (3) (2024)
Honoka Kawamukai, Shumpei Takishita, Kazumi Shimizu, Daisuke Kohda, Koichiro Ishimori, Tomohide Saio
Conformational Distribution of a Multidomain Protein Measured by Single-Pair Small-Angle X-ray Scattering. The journal of physical chemistry letters 15 (3) (2024)
Sam-Geun Kong, Yosuke Yamazaki, Atsushi Shimada, Saku T Kijima, Keiko Hirose, Kaoru Katoh, Jeongsu Ahn, Hyun-Geun Song, Jae-Woo Han, Takeshi Higa, Akira Takano, Yuki Nakamura, Noriyuki Suetsugu, Daisuke Kohda, Taro Q P Uyeda, Masamitsu Wada
CHLOROPLAST UNUSUAL POSITIONING 1 is a plant-specific actin polymerization factor regulating chloroplast movement. The Plant cell 36 (4) (2024)
Honoka Kawamukai, Shumpei Takishita, Kazumi Shimizu, Daisuke Kohda, Koichiro Ishimori, Tomohide Saio
Conformational Distribution of a Multidomain Protein Measured by Single-Pair Small-Angle X-ray Scattering. The journal of physical chemistry letters 15 (3) (2024)
Sam-Geun Kong, Yosuke Yamazaki, Atsushi Shimada, Saku T Kijima, Keiko Hirose, Kaoru Katoh, Jeongsu Ahn, Hyun-Geun Song, Jae-Woo Han, Takeshi Higa, Akira Takano, Yuki Nakamura, Noriyuki Suetsugu, Daisuke Kohda, Taro Q P Uyeda, Masamitsu Wada
CHLOROPLAST UNUSUAL POSITIONING 1 is a plant-specific actin polymerization factor regulating chloroplast movement. The Plant cell (2023)
Seiichiro Hayashi, Daisuke Kohda
The time-zero HSQC method improves the linear free energy relationship of a polypeptide chain through the accurate measurement of residue-specific equilibrium constants. Journal of biomolecular NMR 76 (3) (2022)
Xiling Han, Nobuo Maita, Atsushi Shimada, Daisuke Kohda
Effects of targeting signal mutations in a mitochondrial presequence on the spatial distribution of the conformational ensemble in the binding site of Tom20. Protein science : a publication of the Protein Society 31 (10) (2022)
Daisuke Fujinami, Seiichiro Hayashi, Daisuke Kohda
Residue-Specific Kinetic Insights into the Transition State in Slow Polypeptide Topological Isomerization by NMR Exchange Spectroscopy. The journal of physical chemistry letters 12 (43) (2021)
Yuya Taguchi, Takahiro Yamasaki, Marie Ishikawa, Yuki Kawasaki, Ryuji Yukimura, Maki Mitani, Kunio Hirata, Daisuke Kohda
The structure of an archaeal oligosaccharyltransferase provides insight into the strict exclusion of proline from the N-glycosylation sequon. Communications biology 4 (1) (2021)
Daisuke Fujinami, Hajime Motomura, Hiraku Oshima, Abdullah-Al- Mahin, Khaled M Elsayed, Takeshi Zendo, Yuji Sugita, Kenji Sonomoto, Daisuke Kohda
Correction to "Mosaic Cooperativity in Slow Polypeptide Topological Isomerization Revealed by Residue-Specific NMR Thermodynamic Analysis". The journal of physical chemistry letters 12 (44) (2021)
Yuya Taguchi, Tomohide Saio, Daisuke Kohda
Distance Distribution between Two Iodine Atoms Derived from Small-Angle X-ray Scattering Interferometry for Analyzing a Conformational Ensemble of Heavy Atom-Labeled Small Molecules. The journal of physical chemistry letters 11 (14) (2020)
Daisuke Fujinami, Hajime Motomura, Hiraku Oshima, Abdullah-Al- Mahin, Khaled M Elsayed, Takeshi Zendo, Yuji Sugita, Kenji Sonomoto, Daisuke Kohda
Mosaic Cooperativity in Slow Polypeptide Topological Isomerization Revealed by Residue-Specific NMR Thermodynamic Analysis. The journal of physical chemistry letters 11 (5) (2020)
Ryo Akiyama, Masahiko Annaka, Daisuke Kohda, Hiroyuki Kubota, Yusuke T Maeda, Nobuaki Matsumori, Daisuke Mizuno, Norio Yoshida
Biophysics at Kyushu University. Biophysical reviews 12 (2) (2020)
Kyoko Hanawa-Suetsugu, Yuzuru Itoh, Maisarah Ab Fatah, Tamako Nishimura, Kazuhiro Takemura, Kohei Takeshita, Satoru Kubota, Naoyuki Miyazaki, Wan Nurul Izzati Wan Mohamad Noor, Takehiko Inaba, Nhung Thi Hong Nguyen, Sayaka Hamada-Nakahara, Kayoko Oono-Yakura, Masashi Tachikawa, Kenji Iwasaki, Daisuke Kohda, Masaki Yamamoto, Akio Kitao, Atsushi Shimada, Shiro Suetsugu
Phagocytosis is mediated by two-dimensional assemblies of the F-BAR protein GAS7. Nature communications 10 (1) (2019)
Daisuke Fujinami, Abdullah-Al -Mahin, Khaled M Elsayed, Mohammad R Islam, Jun-Ichi Nagao, Urmi Roy, Sabrina Momin, Takeshi Zendo, Daisuke Kohda, Kenji Sonomoto
The lantibiotic nukacin ISK-1 exists in an equilibrium between active and inactive lipid-II binding states. Communications biology 1 (2018)
Arpita Srivastava, Florence Tama, Daisuke Kohda, Osamu Miyashita
Computational investigation of the conformational dynamics in Tom20-mitochondrial presequence tethered complexes. Proteins 87 (1) (2018)
Kouta Mayanagi, Sonoko Ishino, Tsuyoshi Shirai, Takuji Oyama, Shinichi Kiyonari, Daisuke Kohda, Kosuke Morikawa, Yoshizumi Ishino
Direct visualization of DNA baton pass between replication factors bound to PCNA. Scientific reports 8 (1) (2018)
Shunsuke Matsumoto, Yuya Taguchi, Atsushi Shimada, Mayumi Igura, Daisuke Kohda
Tethering an N-Glycosylation Sequon-Containing Peptide Creates a Catalytically Competent Oligosaccharyltransferase Complex. Biochemistry 56 (4) (2017)
Daisuke Kohda
"Multiple partial recognitions in dynamic equilibrium" in the binding sites of proteins form the molecular basis of promiscuous recognition of structurally diverse ligands. Biophysical reviews 10 (2) (2017)
Yuya Taguchi, Daisuke Fujinami, Daisuke Kohda
Comparative Analysis of Archaeal Lipid-linked Oligosaccharides That Serve as Oligosaccharide Donors for Asn Glycosylation. The Journal of biological chemistry 291 (21) (2016)