Daniel Gautheret

ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 12

Top Venues

Université Paris-Saclay

Université de Montréal (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Université Paris-Saclay Sep 01 2006

France

Professor, PI :: Institute for Integrative Biology of the Cell

Aix-Marseille Université Sep 01 1994 - Aug 31 1998

France

Maître de Conférences :: IGS

University of Colorado Boulder Jan 10 1993 - Aug 31 1994

United States

Postdoc :: MCD Biology

Education History

Université de Montréal Sep 01 1986 - Jan 10 1991

Canada

PHD :: Biochimie

Publications

Haoliang Xue, Mélina Gallopin, Camille Marchet, Ha N Nguyen, Yunfeng Wang, Antoine Lainé, Chloé Bessiere, Daniel Gautheret
KaMRaT: a C++ toolkit for k-mer count matrix dimension reduction. Bioinformatics (Oxford, England) 40 (3) (2024)
Yoann Pradat, Julien Viot, Andrey A Yurchenko, Konstantin Gunbin, Luigi Cerbone, Marc Deloger, Guillaume Grisay, Loic Verlingue, Veronique Chung-Scott, Ismael Padioleau, Leonardo Panunzi, Stefan Michiels, Antoine Hollebecque, Gerome Jules-Clement, Laura Mezquita, Antoine Laine, Yohann Loriot, Benjamin Besse, Luc Friboulet, Fabrice Andre, Paul-Henry Cournede, Daniel Gautheret, Sergey I Nikolaev
Integrative pan-cancer genomic and transcriptomic analyses of refractory metastatic cancer. Cancer discovery (2023)
Naoual Menssouri, Loic Poiraudeau, Carole Helissey, Ludovic Bigot, Jonathan Sabio, Tony Ibrahim, Cedric Pobel, Claudio Nicotra, Maud Ngo-Camus, Ludovic Lacroix, Etienne Rouleau, Lambros Tselikas, Anne Chauchereau, Félix Blanc-Durand, Alice Bernard-Tessier, Anna Patrikidou, Natacha Naoun, Ronan Flippot, Emeline Colomba, Alina Fuerea, Laurence Albiges, Pernelle Lavaud, Paul van de Wiel, Eveline den Biezen-Timmermans, Yvonne J W Rozendaal, Santiago Ponce-Aix, Stefan Michiels, Christophe Massard, Daniel Gautheret, Fabrice Barlesi, Fabrice Andre, Benjamin Besse, Jean Yves Scoazec, Luc Friboulet, Karim Fizazi, Yohann Loriot
Genomic profiling of metastatic castration-resistant prostate cancer samples resistant to androgen-receptor pathway inhibitors. Clinical cancer research : an official journal of the American Association for Cancer Research (2023)
Yunfeng Wang, Haoliang Xue, Marine Aglave, Antoine Lainé, Mélina Gallopin, Daniel Gautheret
The contribution of uncharted RNA sequences to tumor identity in lung adenocarcinoma. NAR cancer 4 (1) (2022)
Pierre Boudry, Emma Piattelli, Emilie Drouineau, Johann Peltier, Anaïs Boutserin, Maxence Lejars, Eliane Hajnsdorf, Marc Monot, Bruno Dupuy, Isabelle Martin-Verstraete, Daniel Gautheret, Claire Toffano-Nioche, Olga Soutourina
Identification of RNAs bound by Hfq reveals widespread RNA partners and a sporulation regulator in the human pathogen Clostridioides difficile. RNA biology 18 (11) (2021)
Yunfeng Wang, Haoliang Xue, Christine Pourcel, Yang Du, Daniel Gautheret
2-kupl: mapping-free variant detection from DNA-seq data of matched samples. BMC bioinformatics 22 (1) (2021)
Thomas Blein, Coline Balzergue, Thomas Roulé, Marc Gabriel, Laetitia Scalisi, Tracy François, Céline Sorin, Aurélie Christ, Christian Godon, Etienne Delannoy, Marie-Laure Martin-Magniette, Laurent Nussaume, Caroline Hartmann, Daniel Gautheret, Thierry Desnos, Martin D Crespi
Landscape of the Noncoding Transcriptome Response of Two Arabidopsis Ecotypes to Phosphate Starvation. Plant physiology 183 (3) (2020)
Ji Wang, Claire Toffano-Nioche, Florence Lorieux, Daniel Gautheret, Jean Lehmann
Accurate characterization of Escherichia coli tRNA modifications with a simple method of deep-sequencing library preparation. RNA biology 18 (1) (2020)
Antonin Morillon, Daniel Gautheret
Bridging the gap between reference and real transcriptomes. Genome biology 20 (1) (2019)
Marina Pinskaya, Zohra Saci, Mélina Gallopin, Marc Gabriel, Ha Tn Nguyen, Virginie Firlej, Marc Descrimes, Audrey Rapinat, David Gentien, Alexandre de la Taille, José-Arturo Londono-Vallejo, Yves Allory, Daniel Gautheret, Antonin Morillon
Reference-free transcriptome exploration reveals novel RNAs for prostate cancer diagnosis. Life science alliance 2 (6) (2019)
Jérôme Audoux, Nicolas Philippe, Rayan Chikhi, Mikaël Salson, Mélina Gallopin, Marc Gabriel, Jérémy Le Coz, Emilie Drouineau, Thérèse Commes, Daniel Gautheret
DE-kupl: exhaustive capture of biological variation in RNA-seq data through k-mer decomposition. Genome biology 18 (1) (2017)
Daniel Gautheret, Joseph H Taube, Sendurai A Mani, Joseph H Taube, Diego Cuerda-Gil, R Keith Slotkin, Bo Zhang, Yanli Wang, David W Salzman, Joanne B Weidhaas
Erratum: The Non-Coding RNA Journal Club: Highlights on Recent Papers-4. Non-Coding RNA 2016, 2, 9. Non-coding RNA 2 (4) (2016)

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Publication Activity (10 Years)

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Daniel Gautheret