Dongyuan Song

Publication Activity (10 Years)

Years Active: 2023-2024
Publications (10 Years): 8

Top Topics

Structural Basis

Circulating Tumor

Top Venues

Nature communications

Nature biotechnology

Research square

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Kian Hong Kock, Patrick K Kimes, Stephen S Gisselbrecht, Sachi Inukai, Sabrina K Phanor, James T Anderson, Gayatri Ramakrishnan, Colin H Lipper, Dongyuan Song, Jesse V Kurland, Julia M Rogers, Raehoon Jeong, Stephen C Blacklow, Rafael A Irizarry, Martha L Bulyk
DNA binding analysis of rare variants in homeodomains reveals homeodomain specificity-determining residues. Nature communications 15 (1) (2024)
Kian Hong Kock, Patrick K Kimes, Stephen S Gisselbrecht, Sachi Inukai, Sabrina K Phanor, James T Anderson, Gayatri Ramakrishnan, Colin H Lipper, Dongyuan Song, Jesse V Kurland, Julia M Rogers, Raehoon Jeong, Stephen C Blacklow, Rafael A Irizarry, Martha L Bulyk
DNA binding analysis of rare variants in homeodomains reveals homeodomain specificity-determining residues. Nature communications 15 (1) (2024)
Kian Hong Kock, Patrick K Kimes, Stephen S Gisselbrecht, Sachi Inukai, Sabrina K Phanor, James T Anderson, Gayatri Ramakrishnan, Colin H Lipper, Dongyuan Song, Jesse V Kurland, Julia M Rogers, Raehoon Jeong, Stephen C Blacklow, Rafael A Irizarry, Martha L Bulyk
DNA binding analysis of rare variants in homeodomains reveals homeodomain specificity-determining residues. Nature communications 15 (1) (2024)
Kian Hong Kock, Patrick K Kimes, Stephen S Gisselbrecht, Sachi Inukai, Sabrina K Phanor, James T Anderson, Gayatri Ramakrishnan, Colin H Lipper, Dongyuan Song, Jesse V Kurland, Julia M Rogers, Raehoon Jeong, Stephen C Blacklow, Rafael A Irizarry, Martha L Bulyk
DNA binding analysis of rare variants in homeodomains reveals homeodomain specificity-determining residues. Nature communications 15 (1) (2024)
Dongyuan Song, Kexin Li, Xinzhou Ge, Jingyi Jessica Li
ClusterDE: a post-clustering differential expression (DE) method robust to false-positive inflation caused by double dipping. bioRxiv : the preprint server for biology (2023)
Jingyi Jessica Li, Dongyuan Song, Kexin Li, Xinzhou Ge
ClusterDE: a post-clustering differential expression (DE) method robust to false-positive inflation caused by double dipping. Research square (2023)
Guanao Yan, Dongyuan Song, Jingyi Jessica Li
scReadSim: a single-cell RNA-seq and ATAC-seq read simulator. Nature communications 14 (1) (2023)
Dongyuan Song, Qingyang Wang, Guanao Yan, Tianyang Liu, Tianyi Sun, Jingyi Jessica Li
scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics. Nature biotechnology (2023)