Douglas Eduardo Valente Pires (Douglas E V Pires)

ResearcherID Scopus Author ID ResearcherID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 35

Top Venues

Briefings in bioinformatics

Journal of chemical information and modeling

Nature microbiology

Nucleic acids research

University of Melbourne

Universidade Federal de Minas Gerais (BSC)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Melbourne

Australia

Senior lecturer :: School of Computing and Information Systems

Fundação Oswaldo Cruz Dec 12 2014

Brazil

Researcher :: Instituto René Rachou

Education History

Universidade Federal de Minas Gerais

Brazil

BSC :: Department of Computer Science

Publications

Raghad Aljarf, Simon Tang, Douglas Eduardo Valente Pires, David Benjamin Ascher
embryoTox: Using Graph-Based Signatures to Predict the Teratogenicity of Small Molecules. Journal of chemical information and modeling 63 (2) (2023)
Raghad Aljarf, Simon Tang, Douglas Eduardo Valente Pires, David Benjamin Ascher
embryoTox: Using Graph-Based Signatures to Predict the Teratogenicity of Small Molecules. Journal of chemical information and modeling 63 (2) (2023)
Joicymara S Xavier, Monika Moir, Houriiyah Tegally, Nikita Sitharam, Wasim Abdool Karim, James Emmanuel San, Joana Linhares, Eduan Wilkinson, David Benjamin Ascher, Cheryl Baxter, Douglas Eduardo Valente Pires, Tulio de Oliveira
SARS-CoV-2 Africa dashboard for real-time COVID-19 information. Nature microbiology 8 (1) (2023)
Adam Serghini, Stephanie Portelli, Guillaume Troadec, Catherine Song, Qisheng Pan, Douglas Eduardo Valente Pires, David Benjamin Ascher
Characterizing and predicting ccRCC-causing missense mutations in Von Hippel-Lindau disease. Human molecular genetics (2023)
Raghad Aljarf, Simon Tang, Douglas Eduardo Valente Pires, David Benjamin Ascher
embryoTox: Using Graph-Based Signatures to Predict the Teratogenicity of Small Molecules. Journal of chemical information and modeling (2023)
Joicymara S Xavier, Monika Moir, Houriiyah Tegally, Nikita Sitharam, Wasim Abdool Karim, James Emmanuel San, Joana Linhares, Eduan Wilkinson, David Benjamin Ascher, Cheryl Baxter, Douglas Eduardo Valente Pires, Tulio de Oliveira
SARS-CoV-2 Africa dashboard for real-time COVID-19 information. Nature microbiology 8 (1) (2023)
Yunzhuo Zhou, Qisheng Pan, Douglas Eduardo Valente Pires, Carlos H M Rodrigues, David Benjamin Ascher
DDMut: predicting effects of mutations on protein stability using deep learning. Nucleic acids research (2023)
Joicymara S Xavier, Monika Moir, Houriiyah Tegally, Nikita Sitharam, Wasim Abdool Karim, James Emmanuel San, Joana Linhares, Eduan Wilkinson, David Benjamin Ascher, Cheryl Baxter, Douglas Eduardo Valente Pires, Tulio de Oliveira
SARS-CoV-2 Africa dashboard for real-time COVID-19 information. Nature microbiology 8 (1) (2023)
Qisheng Pan, Thanh Binh Nguyen, David Benjamin Ascher, Douglas Eduardo Valente Pires
Systematic evaluation of computational tools to predict the effects of mutations on protein stability in the absence of experimental structures. Briefings in bioinformatics 23 (2) (2022)
Vinícius A Paiva, Murillo V Mendonça, Sabrina A Silveira, David Benjamin Ascher, Douglas Eduardo Valente Pires, Sandro C Izidoro
GASS-Metal: identifying metal-binding sites on protein structures using genetic algorithms. Briefings in bioinformatics 23 (5) (2022)
Stephanie Portelli, Amanda Albanaz, Douglas Eduardo Valente Pires, David Benjamin Ascher
Identifying the molecular drivers of ALS-implicated missense mutations. Journal of medical genetics (2022)
Saba Iftkhar, Alex G C de Sá, João P L Velloso, Raghad Aljarf, Douglas Eduardo Valente Pires, David Benjamin Ascher
<i>cardioToxCSM</i>: A Web Server for Predicting Cardiotoxicity of Small Molecules. Journal of chemical information and modeling 62 (20) (2022)
Charles A Santana, Sandro C Izidoro, Raquel C de Melo-Minardi, Jonathan D Tyzack, Antonio J M Ribeiro, Douglas Eduardo Valente Pires, Janet M Thornton, Sabrina de Azevedo Silveira
GRaSP-web: a machine learning strategy to predict binding sites based on residue neighborhood graphs. Nucleic acids research (2022)
Alex G C de Sá, Yangyang Long, Stephanie Portelli, Douglas Eduardo Valente Pires, David Benjamin Ascher
toxCSM: comprehensive prediction of small molecule toxicity profiles. Briefings in bioinformatics 23 (5) (2022)
Joicymara S Xavier, Monika Moir, Houriiyah Tegally, Nikita Sitharam, Wasim Abdool Karim, James Emmanuel San, Joana Linhares, Eduan Wilkinson, David Benjamin Ascher, Cheryl Baxter, Douglas Eduardo Valente Pires, Tulio de Oliveira
SARS-CoV-2 Africa dashboard for real-time COVID-19 information. Nature microbiology (2022)
Christopher R McMaster, Alix Bird, David F L Liew, Russell R Buchanan, Claire Elizabeth Owen, Wendy W Chapman, Douglas Eduardo Valente Pires
Artificial Intelligence and Deep Learning for Rheumatologists. Arthritis & rheumatology (Hoboken, N.J.) (2022)
Mahima Sharma, James P Lingford, Marija Petricevic, Alexander J D Snow, Yunyang Zhang, Michael A Järvå, Janice W-Y Mui, Nichollas E Scott, Eleanor C Saunders, Runyu Mao, Ruwan Epa, Bruna M da Silva, Douglas Eduardo Valente Pires, David Benjamin Ascher, Malcolm J McConville, Gideon J Davies, Spencer J Williams, Ethan D Goddard-Borger
Oxidative desulfurization pathway for complete catabolism of sulfoquinovose by bacteria. Proceedings of the National Academy of Sciences of the United States of America 119 (4) (2022)
Carlos H M Rodrigues, Douglas Eduardo Valente Pires, Tom L Blundell, David Benjamin Ascher
Structural landscapes of PPI interfaces. Briefings in bioinformatics 23 (4) (2022)
Pâmela M Rezende, Joicymara S Xavier, David Benjamin Ascher, Gabriel R Fernandes, Douglas Eduardo Valente Pires
Evaluating hierarchical machine learning approaches to classify biological databases. Briefings in bioinformatics 23 (4) (2022)
Douglas Eduardo Valente Pires, Keith A Stubbs, Joshua S Mylne, David Benjamin Ascher
cropCSM: designing safe and potent herbicides with graph-based signatures. Briefings in bioinformatics 23 (2) (2022)
Carlos H M Rodrigues, Douglas Eduardo Valente Pires, David Benjamin Ascher
mmCSM-PPI: predicting the effects of multiple point mutations on protein-protein interactions. Nucleic acids research 49 (W1) (2021)
João Paulo L Velloso, David Benjamin Ascher, Douglas Eduardo Valente Pires
pdCSM-GPCR: predicting potent GPCR ligands with graph-based signatures. Bioinformatics advances 1 (1) (2021)
Carlos H M Rodrigues, Douglas Eduardo Valente Pires, David Benjamin Ascher
pdCSM-PPI: Using Graph-Based Signatures to Identify Protein-Protein Interaction Inhibitors. Journal of chemical information and modeling 61 (11) (2021)
Raghad Al-Jarf, Alex G C de Sá, Douglas Eduardo Valente Pires, David Benjamin Ascher
pdCSM-cancer: Using Graph-Based Signatures to Identify Small Molecules with Anticancer Properties. Journal of chemical information and modeling 61 (7) (2021)
Edward Airey, Stephanie Portelli, Joicymara S Xavier, Yoo Chan Myung, Michael Silk, Malancha Karmakar, João P L Velloso, Carlos H M Rodrigues, Hardik H Parate, Anjali Garg, Raghad Al-Jarf, Lucy Barr, Juliana A Geraldo, Pâmela M Rezende, Douglas Eduardo Valente Pires, David Benjamin Ascher
Identifying Genotype-Phenotype Correlations via Integrative Mutation Analysis. Methods in molecular biology (Clifton, N.J.) 2190 (2021)
Thanh Binh Nguyen, Douglas Eduardo Valente Pires, David Benjamin Ascher
CSM-carbohydrate: protein-carbohydrate binding affinity prediction and docking scoring function. Briefings in bioinformatics (2021)
Bruna Moreira da Silva, YooChan Myung, David Benjamin Ascher, Douglas Eduardo Valente Pires
epitope3D: a machine learning method for conformational B-cell epitope prediction. Briefings in bioinformatics (2021)
Thanh Binh Nguyen, Yoochan Myung, Alex G C de Sá, Douglas Eduardo Valente Pires, David Benjamin Ascher
mmCSM-NA: accurately predicting effects of single and multiple mutations on protein-nucleic acid binding affinity. NAR genomics and bioinformatics 3 (4) (2021)
Michael Silk, Douglas Eduardo Valente Pires, Carlos H M Rodrigues, Elston N D'Souza, Moshe Olshansky, Natalie Thorne, David Benjamin Ascher
MTR3D: identifying regions within protein tertiary structures under purifying selection. Nucleic acids research 49 (W1) (2021)
Stephanie Portelli, Yoochan Myung, Nicholas Furnham, Sundeep Chaitanya Vedithi, Douglas Eduardo Valente Pires, David Benjamin Ascher
Prediction of rifampicin resistance beyond the RRDR using structure-based machine learning approaches. Scientific reports 10 (1) (2020)
Douglas Eduardo Valente Pires, David Benjamin Ascher
mycoCSM: Using Graph-Based Signatures to Identify Safe Potent Hits against Mycobacteria. Journal of chemical information and modeling 60 (7) (2020)
Nidhi Jatana, David Benjamin Ascher, Douglas Eduardo Valente Pires, Rajesh S Gokhale, Lipi Thukral
Human LC3 and GABARAP subfamily members achieve functional specificity via specific structural modulations. Autophagy 16 (2) (2019)
Jean-Pierre L Bayley, Birke Bausch, Johannes Adriaan Rijken, Leonie Theresia van Hulsteijn, Jeroen C Jansen, David Ascher, Douglas Eduardo Valente Pires, Frederik J Hes, Erik F Hensen, Eleonora P M Corssmit, Peter Devilee, Hartmut P H Neumann
Variant type is associated with disease characteristics in SDHB, SDHC and SDHD-linked phaeochromocytoma-paraganglioma. Journal of medical genetics 57 (2) (2019)
Katrina A Andrews, David B Ascher, Douglas Eduardo Valente Pires, Daniel R Barnes, Lindsey Vialard, Ruth T Casey, Nicola Bradshaw, Julian Adlard, Simon Aylwin, Paul Brennan, Carole Brewer, Trevor Cole, Jackie A Cook, Rosemarie Davidson, Alan Donaldson, Alan Fryer, Lynn Greenhalgh, Shirley V Hodgson, Richard Irving, Fiona Lalloo, Michelle McConachie, Vivienne P M McConnell, Patrick J Morrison, Victoria Murday, Soo-Mi Park, Helen L Simpson, Katie Snape, Susan Stewart, Susan E Tomkins, Yvonne Wallis, Louise Izatt, David Goudie, Robert S Lindsay, Colin G Perry, Emma R Woodward, Antonis C Antoniou, Eamonn R Maher
Tumour risks and genotype-phenotype correlations associated with germline variants in succinate dehydrogenase subunit genes SDHB, SDHC and SDHD. Journal of medical genetics 55 (6) (2018)
Fernanda C Soardi, Alice Machado-Silva, Natália D Linhares, Ge Zheng, Qianhui Qu, Heloísa B Pena, Thaís M M Martins, Helaine G S Vieira, Núbia B Pereira, Raquel C Melo-Minardi, Carolina C Gomes, Ricardo S Gomez, Dawidson A Gomes, Douglas Eduardo Valente Pires, David B Ascher, Hongtao Yu, Sergio D J Pena
Familial STAG2 germline mutation defines a new human cohesinopathy. NPJ genomic medicine 2 (2017)

Douglas Eduardo Valente Pires.css-eqlu8i{font-size:small;padding-left:4px;} (Douglas E V Pires)

Publication Activity (10 Years)

Top Topics

Top Venues

Douglas Eduardo Valente Pires (Douglas E V Pires)