Faisal Mahmood

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 55

Top Topics

Convolutional Neural Network

Machine Learning

Top Venues

Nature medicine

Nature biomedical engineering

Nature communications

Proceedings of the National Academy of Sciences of the United States of America

This page only lists publications with an associated author ORCID identifier.

Publications

Anurag Vaidya, Richard J Chen, Drew F K Williamson, Andrew H Song, Guillaume Jaume, Yuzhe Yang, Thomas Hartvigsen, Emma C Dyer, Ming Y Lu, Jana Lipkova, Muhammad Shaban, Tiffany Y Chen, Faisal Mahmood
Demographic bias in misdiagnosis by computational pathology models. Nature medicine 30 (4) (2024)
Ming Y Lu, Bowen Chen, Drew F K Williamson, Richard J Chen, Ivy Liang, Tong Ding, Guillaume Jaume, Igor Odintsov, Long Phi Le, Georg K Gerber, Anil V Parwani, Andrew Zhang, Faisal Mahmood
A visual-language foundation model for computational pathology. Nature medicine 30 (3) (2024)
Ming Y Lu, Bowen Chen, Drew F K Williamson, Richard J Chen, Ivy Liang, Tong Ding, Guillaume Jaume, Igor Odintsov, Long Phi Le, Georg K Gerber, Anil V Parwani, Andrew Zhang, Faisal Mahmood
A visual-language foundation model for computational pathology. Nature medicine 30 (3) (2024)
Ming Y Lu, Bowen Chen, Drew F K Williamson, Richard J Chen, Ivy Liang, Tong Ding, Guillaume Jaume, Igor Odintsov, Long Phi Le, Georg K Gerber, Anil V Parwani, Andrew Zhang, Faisal Mahmood
A visual-language foundation model for computational pathology. Nature medicine 30 (3) (2024)
Muhammad Shaban, Yunhao Bai, Huaying Qiu, Shulin Mao, Jason Yeung, Yao-Yu Yeo, Vignesh Shanmugam, Han Chen, Bokai Zhu, Jason L Weirather, Garry P Nolan, Margaret A Shipp, Scott J Rodig, Sizun J Jiang, Faisal Mahmood
MAPS: pathologist-level cell type annotation from tissue images through machine learning. Nature communications 15 (1) (2024)
Richard J Chen, Tong Ding, Ming Y Lu, Drew F K Williamson, Guillaume Jaume, Andrew H Song, Bowen Chen, Andrew Zhang, Daniel Shao, Muhammad Shaban, Mane Williams, Lukas Oldenburg, Luca L Weishaupt, Judy J Wang, Anurag Vaidya, Long Phi Le, Georg K Gerber, Sharifa Sahai, Walt Williams, Faisal Mahmood
Towards a general-purpose foundation model for computational pathology. Nature medicine 30 (3) (2024)
Raquel Perez-Lopez, Narmin Ghaffari Laleh, Faisal Mahmood, Jakob Nikolas Kather
A guide to artificial intelligence for cancer researchers. Nature reviews. Cancer (2024)
Muhammad Shaban, Yunhao Bai, Huaying Qiu, Shulin Mao, Jason Yeung, Yao-Yu Yeo, Vignesh Shanmugam, Han Chen, Bokai Zhu, Jason L Weirather, Garry P Nolan, Margaret A Shipp, Scott J Rodig, Sizun J Jiang, Faisal Mahmood
MAPS: pathologist-level cell type annotation from tissue images through machine learning. Nature communications 15 (1) (2024)
Ming Y Lu, Bowen Chen, Drew F K Williamson, Richard J Chen, Ivy Liang, Tong Ding, Guillaume Jaume, Igor Odintsov, Long Phi Le, Georg K Gerber, Anil V Parwani, Andrew Zhang, Faisal Mahmood
A visual-language foundation model for computational pathology. Nature medicine 30 (3) (2024)
Muhammad Shaban, Yunhao Bai, Huaying Qiu, Shulin Mao, Jason Yeung, Yao-Yu Yeo, Vignesh Shanmugam, Han Chen, Bokai Zhu, Jason L Weirather, Garry P Nolan, Margaret A Shipp, Scott J Rodig, Sizun J Jiang, Faisal Mahmood
MAPS: pathologist-level cell type annotation from tissue images through machine learning. Nature communications 15 (1) (2024)
Richard J Chen, Tong Ding, Ming Y Lu, Drew F K Williamson, Guillaume Jaume, Andrew H Song, Bowen Chen, Andrew Zhang, Daniel Shao, Muhammad Shaban, Mane Williams, Lukas Oldenburg, Luca L Weishaupt, Judy J Wang, Anurag Vaidya, Long Phi Le, Georg K Gerber, Sharifa Sahai, Walt Williams, Faisal Mahmood
Towards a general-purpose foundation model for computational pathology. Nature medicine 30 (3) (2024)
Muhammad Shaban, Yunhao Bai, Huaying Qiu, Shulin Mao, Jason Yeung, Yao-Yu Yeo, Vignesh Shanmugam, Han Chen, Bokai Zhu, Jason L Weirather, Garry P Nolan, Margaret A Shipp, Scott J Rodig, Sizun J Jiang, Faisal Mahmood
MAPS: pathologist-level cell type annotation from tissue images through machine learning. Nature communications 15 (1) (2024)
Richard J Chen, Tong Ding, Ming Y Lu, Drew F K Williamson, Guillaume Jaume, Andrew H Song, Bowen Chen, Andrew Zhang, Daniel Shao, Muhammad Shaban, Mane Williams, Lukas Oldenburg, Luca L Weishaupt, Judy J Wang, Anurag Vaidya, Long Phi Le, Georg K Gerber, Sharifa Sahai, Walt Williams, Faisal Mahmood
Towards a general-purpose foundation model for computational pathology. Nature medicine 30 (3) (2024)
Diana M Ho, Muhammad Shaban, Faisal Mahmood, Payel Ganguly, Leonardo Todeschini, David Van Vactor, Spyros Artavanis-Tsakonas
cAMP/PKA signaling regulates TDP-43 aggregation and mislocalization. Proceedings of the National Academy of Sciences of the United States of America 121 (24) (2024)
Richard J Chen, Tong Ding, Ming Y Lu, Drew F K Williamson, Guillaume Jaume, Andrew H Song, Bowen Chen, Andrew Zhang, Daniel Shao, Muhammad Shaban, Mane Williams, Lukas Oldenburg, Luca L Weishaupt, Judy J Wang, Anurag Vaidya, Long Phi Le, Georg K Gerber, Sharifa Sahai, Walt Williams, Faisal Mahmood
Towards a general-purpose foundation model for computational pathology. Nature medicine 30 (3) (2024)
Diana M Ho, Muhammad Shaban, Faisal Mahmood, Payel Ganguly, Leonardo Todeschini, David Van Vactor, Spyros Artavanis-Tsakonas
cAMP/PKA signaling regulates TDP-43 aggregation and mislocalization. Proceedings of the National Academy of Sciences of the United States of America 121 (24) (2024)
Diana M Ho, Muhammad Shaban, Faisal Mahmood, Payel Ganguly, Leonardo Todeschini, David Van Vactor, Spyros Artavanis-Tsakonas
cAMP/PKA signaling regulates TDP-43 aggregation and mislocalization. Proceedings of the National Academy of Sciences of the United States of America 121 (24) (2024)
Muhammad Shaban, Yunhao Bai, Huaying Qiu, Shulin Mao, Jason Yeung, Yao-Yu Yeo, Vignesh Shanmugam, Han Chen, Bokai Zhu, Jason L Weirather, Garry P Nolan, Margaret A Shipp, Scott J Rodig, Sizun J Jiang, Faisal Mahmood
MAPS: pathologist-level cell type annotation from tissue images through machine learning. Nature communications 15 (1) (2024)
Diana M Ho, Muhammad Shaban, Faisal Mahmood, Payel Ganguly, Leonardo Todeschini, David Van Vactor, Spyros Artavanis-Tsakonas
cAMP/PKA signaling regulates TDP-43 aggregation and mislocalization. Proceedings of the National Academy of Sciences of the United States of America 121 (24) (2024)
Ming Y Lu, Bowen Chen, Drew F K Williamson, Richard J Chen, Melissa Zhao, Aaron K Chow, Kenji Ikemura, Ahrong Kim, Dimitra Pouli, Ankush Patel, Amr Soliman, Chengkuan Chen, Tong Ding, Judy J Wang, Georg K Gerber, Ivy Liang, Long Phi Le, Anil V Parwani, Luca L Weishaupt, Faisal Mahmood
A Multimodal Generative AI Copilot for Human Pathology. Nature (2024)
Ming Y Lu, Bowen Chen, Drew F K Williamson, Richard J Chen, Ivy Liang, Tong Ding, Guillaume Jaume, Igor Odintsov, Long Phi Le, Georg K Gerber, Anil V Parwani, Andrew Zhang, Faisal Mahmood
A visual-language foundation model for computational pathology. Nature medicine 30 (3) (2024)
Richard J Chen, Tong Ding, Ming Y Lu, Drew F K Williamson, Guillaume Jaume, Andrew H Song, Bowen Chen, Andrew Zhang, Daniel Shao, Muhammad Shaban, Mane Williams, Lukas Oldenburg, Luca L Weishaupt, Judy J Wang, Anurag Vaidya, Long Phi Le, Georg K Gerber, Sharifa Sahai, Walt Williams, Faisal Mahmood
Towards a general-purpose foundation model for computational pathology. Nature medicine 30 (3) (2024)
Richard J Chen, Tong Ding, Ming Y Lu, Drew F K Williamson, Guillaume Jaume, Andrew H Song, Bowen Chen, Andrew Zhang, Daniel Shao, Muhammad Shaban, Mane Williams, Lukas Oldenburg, Luca L Weishaupt, Judy J Wang, Anurag Vaidya, Long Phi Le, Georg K Gerber, Sharifa Sahai, Walt Williams, Faisal Mahmood
Towards a general-purpose foundation model for computational pathology. Nature medicine (2024)
Anurag Vaidya, Richard J Chen, Drew F K Williamson, Andrew H Song, Guillaume Jaume, Yuzhe Yang, Thomas Hartvigsen, Emma C Dyer, Ming Y Lu, Jana Lipkova, Muhammad Shaban, Tiffany Y Chen, Faisal Mahmood
Demographic bias in misdiagnosis by computational pathology models. Nature medicine 30 (4) (2024)
Anurag Vaidya, Richard J Chen, Drew F K Williamson, Andrew H Song, Guillaume Jaume, Yuzhe Yang, Thomas Hartvigsen, Emma C Dyer, Ming Y Lu, Jana Lipkova, Muhammad Shaban, Tiffany Y Chen, Faisal Mahmood
Demographic bias in misdiagnosis by computational pathology models. Nature medicine 30 (4) (2024)
Anurag Vaidya, Richard J Chen, Drew F K Williamson, Andrew H Song, Guillaume Jaume, Yuzhe Yang, Thomas Hartvigsen, Emma C Dyer, Ming Y Lu, Jana Lipkova, Muhammad Shaban, Tiffany Y Chen, Faisal Mahmood
Demographic bias in misdiagnosis by computational pathology models. Nature medicine 30 (4) (2024)
Richard J Chen, Tong Ding, Ming Y Lu, Drew F K Williamson, Guillaume Jaume, Andrew H Song, Bowen Chen, Andrew Zhang, Daniel Shao, Muhammad Shaban, Mane Williams, Lukas Oldenburg, Luca L Weishaupt, Judy J Wang, Anurag Vaidya, Long Phi Le, Georg K Gerber, Sharifa Sahai, Walt Williams, Faisal Mahmood
Towards a general-purpose foundation model for computational pathology. Nature medicine 30 (3) (2024)
Anurag Vaidya, Richard J Chen, Drew F K Williamson, Andrew H Song, Guillaume Jaume, Yuzhe Yang, Thomas Hartvigsen, Emma C Dyer, Ming Y Lu, Jana Lipkova, Muhammad Shaban, Tiffany Y Chen, Faisal Mahmood
Demographic bias in misdiagnosis by computational pathology models. Nature medicine 30 (4) (2024)
Ming Y Lu, Bowen Chen, Drew F K Williamson, Richard J Chen, Ivy Liang, Tong Ding, Guillaume Jaume, Igor Odintsov, Long Phi Le, Georg K Gerber, Anil V Parwani, Andrew Zhang, Faisal Mahmood
A visual-language foundation model for computational pathology. Nature medicine 30 (3) (2024)
Muhammad Shaban, Yunhao Bai, Huaying Qiu, Shulin Mao, Jason Yeung, Yao-Yu Yeo, Vignesh Shanmugam, Han Chen, Bokai Zhu, Jason L Weirather, Garry P Nolan, Margaret A Shipp, Scott J Rodig, Sizun J Jiang, Faisal Mahmood
MAPS: pathologist-level cell type annotation from tissue images through machine learning. Nature communications 15 (1) (2024)
Raquel Perez-Lopez, Narmin Ghaffari Laleh, Faisal Mahmood, Jakob Nikolas Kather
A guide to artificial intelligence for cancer researchers. Nature reviews. Cancer 24 (6) (2024)
Anurag Vaidya, Richard J Chen, Drew F K Williamson, Andrew H Song, Guillaume Jaume, Yuzhe Yang, Thomas Hartvigsen, Emma C Dyer, Ming Y Lu, Jana Lipkova, Muhammad Shaban, Tiffany Y Chen, Faisal Mahmood
Demographic bias in misdiagnosis by computational pathology models. Nature medicine 30 (4) (2024)
Anurag Vaidya, Richard J Chen, Drew F K Williamson, Andrew H Song, Guillaume Jaume, Yuzhe Yang, Thomas Hartvigsen, Emma C Dyer, Ming Y Lu, Jana Lipkova, Muhammad Shaban, Tiffany Y Chen, Faisal Mahmood
Demographic bias in misdiagnosis by computational pathology models. Nature medicine 30 (4) (2024)
Muhammad Shaban, Yunhao Bai, Huaying Qiu, Shulin Mao, Jason Yeung, Yao-Yu Yeo, Vignesh Shanmugam, Han Chen, Bokai Zhu, Jason L Weirather, Garry P Nolan, Margaret A Shipp, Scott J Rodig, Sizun J Jiang, Faisal Mahmood
MAPS: pathologist-level cell type annotation from tissue images through machine learning. Nature communications 15 (1) (2024)
Diana M Ho, Muhammad Shaban, Faisal Mahmood, Payel Ganguly, Leonardo Todeschini, David Van Vactor, Spyros Artavanis-Tsakonas
cAMP/PKA signaling regulates TDP-43 aggregation and mislocalization. Proceedings of the National Academy of Sciences of the United States of America 121 (24) (2024)
Ming Y Lu, Bowen Chen, Drew F K Williamson, Richard J Chen, Ivy Liang, Tong Ding, Guillaume Jaume, Igor Odintsov, Long Phi Le, Georg K Gerber, Anil V Parwani, Andrew Zhang, Faisal Mahmood
A visual-language foundation model for computational pathology. Nature medicine (2024)
Ming Y Lu, Bowen Chen, Drew F K Williamson, Richard J Chen, Ivy Liang, Tong Ding, Guillaume Jaume, Igor Odintsov, Long Phi Le, Georg K Gerber, Anil V Parwani, Andrew Zhang, Faisal Mahmood
A visual-language foundation model for computational pathology. Nature medicine 30 (3) (2024)
Richard J Chen, Tong Ding, Ming Y Lu, Drew F K Williamson, Guillaume Jaume, Andrew H Song, Bowen Chen, Andrew Zhang, Daniel Shao, Muhammad Shaban, Mane Williams, Lukas Oldenburg, Luca L Weishaupt, Judy J Wang, Anurag Vaidya, Long Phi Le, Georg K Gerber, Sharifa Sahai, Walt Williams, Faisal Mahmood
Towards a general-purpose foundation model for computational pathology. Nature medicine 30 (3) (2024)
Muhammad Shaban, Yunhao Bai, Huaying Qiu, Shulin Mao, Jason Yeung, Yao-Yu Yeo, Vignesh Shanmugam, Han Chen, Bokai Zhu, Jason L Weirather, Garry P Nolan, Margaret A Shipp, Scott J Rodig, Sizun J Jiang, Faisal Mahmood
MAPS: pathologist-level cell type annotation from tissue images through machine learning. Nature communications 15 (1) (2024)
Richard J Chen, Judy Jiaqi Wang, Drew F K Williamson, Tiffany Y Chen, Jana Lipkova, Ming Y Lu, Sharifa Sahai, Faisal Mahmood
Algorithmic fairness in artificial intelligence for medicine and healthcare. Nature biomedical engineering 7 (6) (2023)
Richard J Chen, Judy Jiaqi Wang, Drew F K Williamson, Tiffany Y Chen, Jana Lipkova, Ming Y Lu, Sharifa Sahai, Faisal Mahmood
Algorithmic fairness in artificial intelligence for medicine and healthcare. Nature biomedical engineering 7 (6) (2023)
Ming Y Lu, Bowen Chen, Faisal Mahmood
Harnessing medical twitter data for pathology AI. Nature medicine (2023)
Richard J Chen, Judy Jiaqi Wang, Drew F K Williamson, Tiffany Y Chen, Jana Lipkova, Ming Y Lu, Sharifa Sahai, Faisal Mahmood
Algorithmic fairness in artificial intelligence for medicine and healthcare. Nature biomedical engineering 7 (6) (2023)
Jordan Anaya, John-William Sidhom, Faisal Mahmood, Alexander S Baras
Multiple-instance learning of somatic mutations for the classification of tumour type and the prediction of microsatellite status. Nature biomedical engineering (2023)
Kutsev Bengisu Ozyoruk, Sermet Can, Berkan Darbaz, Kayhan Başak, Derya Demir, Guliz Irem Gokceler, Gurdeniz Serin, Uguray Payam Hacisalihoglu, Emirhan Kurtuluş, Ming Y Lu, Tiffany Y Chen, Drew F K Williamson, Funda Yılmaz, Faisal Mahmood, Mehmet Turan
A deep-learning model for transforming the style of tissue images from cryosectioned to formalin-fixed and paraffin-embedded. Nature biomedical engineering 6 (12) (2022)
Kutsev Bengisu Ozyoruk, Sermet Can, Berkan Darbaz, Kayhan Başak, Derya Demir, Guliz Irem Gokceler, Gurdeniz Serin, Uguray Payam Hacisalihoglu, Emirhan Kurtuluş, Ming Y Lu, Tiffany Y Chen, Drew F K Williamson, Funda Yılmaz, Faisal Mahmood, Mehmet Turan
A deep-learning model for transforming the style of tissue images from cryosectioned to formalin-fixed and paraffin-embedded. Nature biomedical engineering (2022)
Chengkuan Chen, Ming Y Lu, Drew F K Williamson, Tiffany Y Chen, Andrew J Schaumberg, Faisal Mahmood
Fast and scalable search of whole-slide images via self-supervised deep learning. Nature biomedical engineering (2022)
Kutsev Bengisu Ozyoruk, Sermet Can, Berkan Darbaz, Kayhan Başak, Derya Demir, Guliz Irem Gokceler, Gurdeniz Serin, Uguray Payam Hacisalihoglu, Emirhan Kurtuluş, Ming Y Lu, Tiffany Y Chen, Drew F K Williamson, Funda Yılmaz, Faisal Mahmood, Mehmet Turan
A deep-learning model for transforming the style of tissue images from cryosectioned to formalin-fixed and paraffin-embedded. Nature biomedical engineering 6 (12) (2022)
Jochen K Lennerz, Ursula Green, Drew F K Williamson, Faisal Mahmood
A unifying force for the realization of medical AI. NPJ digital medicine 5 (1) (2022)
Kutsev Bengisu Ozyoruk, Sermet Can, Berkan Darbaz, Kayhan Başak, Derya Demir, Guliz Irem Gokceler, Gurdeniz Serin, Uguray Payam Hacisalihoglu, Emirhan Kurtuluş, Ming Y Lu, Tiffany Y Chen, Drew F K Williamson, Funda Yılmaz, Faisal Mahmood, Mehmet Turan
A deep-learning model for transforming the style of tissue images from cryosectioned to formalin-fixed and paraffin-embedded. Nature biomedical engineering 6 (12) (2022)
Jana Lipkova, Tiffany Y Chen, Ming Y Lu, Richard J Chen, Maha Shady, Mane Williams, Jingwen Wang, Zahra Noor, Richard N Mitchell, Mehmet Turan, Gulfize Coskun, Funda Yılmaz, Derya Demir, Deniz Nart, Kayhan Basak, Nesrin Turhan, Selvinaz Ozkara, Yara Banz, Katja E Odening, Faisal Mahmood
Deep learning-enabled assessment of cardiac allograft rejection from endomyocardial biopsies. Nature medicine 28 (3) (2022)
Guillaume Jaume, Andrew H Song, Faisal Mahmood
Integrating context for superior cancer prognosis. Nature biomedical engineering (2022)
Richard J Chen, Ming Y Lu, Tiffany Y Chen, Drew F K Williamson, Faisal Mahmood
Synthetic data in machine learning for medicine and healthcare. Nature biomedical engineering 5 (6) (2021)
Ming Y Lu, Tiffany Y Chen, Drew F K Williamson, Melissa Zhao, Maha Shady, Jana Lipkova, Faisal Mahmood
AI-based pathology predicts origins for cancers of unknown primary. Nature 594 (7861) (2021)
Ming Y Lu, Drew F K Williamson, Tiffany Y Chen, Richard J Chen, Matteo Barbieri, Faisal Mahmood
Data-efficient and weakly supervised computational pathology on whole-slide images. Nature biomedical engineering 5 (6) (2021)