Fangqiang Zhu

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 14

Top Topics

Molecular Dynamics Simulations

Protein Protein

Top Venues

The journal of physical chemistry. B

Journal of chemical information and modeling

Journal of chemical theory and computation

Journal of medicinal chemistry

This page only lists publications with an associated author ORCID identifier.

Publications

Hao Sha, Fangqiang Zhu
Hexagonal Lattices of HIV Capsid Proteins Explored by Simulations Based on a Thermodynamically Consistent Model. The journal of physical chemistry. B 128 (4) (2024)
Hao Sha, Fangqiang Zhu
Hexagonal Lattices of HIV Capsid Proteins Explored by Simulations Based on a Thermodynamically Consistent Model. The journal of physical chemistry. B (2024)
Hao Sha, Fangqiang Zhu
Hexagonal Lattices of HIV Capsid Proteins Explored by Simulations Based on a Thermodynamically Consistent Model. The journal of physical chemistry. B 128 (4) (2024)
Thomas A Desautels, Kathryn T Arrildt, Adam T Zemla, Edmond Y Lau, Fangqiang Zhu, Dante Ricci, Stephanie E J Cronin, Seth J Zost, Elad Binshtein, Suzanne M Scheaffer, Taylor B Engdahl, Elaine Chen, John W Goforth, Denis Vashchenko, Sam Nguyen, Dina R Weilhammer, Jacky Kai-Yin Lo, Bonnee Rubinfeld, Edwin A Saada, Tracy Weisenberger, Tek-Hyung Lee, Bradley Whitener, James B Case, Alexander Ladd, Mary S Silva, Rebecca M Haluska, Emilia A Grzesiak, Thomas W Bates, Brenden K Petersen, Larissa B Thackray, Brent W Segelke, Antonietta Maria Lillo, Shivshankar Sundaram, Michael S Diamond, James E Crowe, Robert H Carnahan, Daniel M Faissol
Computationally restoring the potency of a clinical antibody against SARS-CoV-2 Omicron subvariants. bioRxiv : the preprint server for biology (2022)
Hamed Meshkin, Fangqiang Zhu
Toward Convergence in Free Energy Calculations for Protein Conformational Changes: A Case Study on the Thin Gate of Mhp1 Transporter. Journal of chemical theory and computation 17 (10) (2021)
Delin Sun, Thasin A Peyear, William F Drew Bennett, Matthew Holcomb, Stewart He, Fangqiang Zhu, Felice C Lightstone, Olaf S Andersen, Helgi I Ingólfsson
Assessing the Perturbing Effects of Drugs on Lipid Bilayers Using Gramicidin Channel-Based In Silico and In Vitro Assays. Journal of medicinal chemistry 63 (20) (2020)
Fangqiang Zhu, Xiaohua Zhang, Jonathan E Allen, Derek Jones, Felice C Lightstone
Binding Affinity Prediction by Pairwise Function Based on Neural Network. Journal of chemical information and modeling 60 (6) (2020)
Xiaoyan Zhou, Fangqiang Zhu
Calculating Single-Channel Permeability and Conductance from Transition Paths. Journal of chemical information and modeling 59 (2) (2019)
Xiaoling Leng, Fangqiang Zhu, Stephen R Wassall
Vitamin E Has Reduced Affinity for a Polyunsaturated Phospholipid: An Umbrella Sampling Molecular Dynamics Simulations Study. The journal of physical chemistry. B 122 (35) (2018)
Fangqiang Zhu
Calculating transition rates from durations of transition paths. The Journal of chemical physics 146 (12) (2018)
Hamed Meshkin, Fangqiang Zhu
Thermodynamics of Protein Folding Studied by Umbrella Sampling along a Reaction Coordinate of Native Contacts. Journal of chemical theory and computation 13 (5) (2017)
Jaekyun Jeon, Xin Qiao, Ivan Hung, Alok K Mitra, Ambroise Desfosses, Daniel Huang, Peter L Gor'kov, Rebecca C Craven, Richard L Kingston, Zhehong Gan, Fangqiang Zhu, Bo Chen
Structural Model of the Tubular Assembly of the Rous Sarcoma Virus Capsid Protein. Journal of the American Chemical Society 139 (5) (2017)
Hao Sha, Fangqiang Zhu
Parameter Optimization for Interaction between C-Terminal Domains of HIV-1 Capsid Protein. Journal of chemical information and modeling 57 (5) (2017)
Hyun Deok Song, Fangqiang Zhu
Finite Temperature String Method with Umbrella Sampling: Application on a Side Chain Flipping in Mhp1 Transporter. The journal of physical chemistry. B 121 (15) (2016)