Helgi I Ingólfsson

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 20

Top Topics

Fluorescent Probe

Molecular Dynamics

Top Venues

Communications biology

Journal of chemical theory and computation

The journal of physical chemistry letters

This page only lists publications with an associated author ORCID identifier.

Publications

Rebika Shrestha, Timothy S Carpenter, Que N Van, Constance Agamasu, Marco Tonelli, Fikret Aydin, De Chen, Gulcin Gulten, James N Glosli, César A López, Tomas Oppelstrup, Chris Neale, Sandrasegaram Gnanakaran, William K Gillette, Helgi I Ingólfsson, Felice C Lightstone, Andrew G Stephen, Frederick H Streitz, Dwight V Nissley, Thomas J Turbyville
Author Correction: Membrane lipids drive formation of KRAS4b-RAF1 RBDCRD nanoclusters on the membrane. Communications biology 7 (1) (2024)
Rebika Shrestha, Timothy S Carpenter, Que N Van, Constance Agamasu, Marco Tonelli, Fikret Aydin, De Chen, Gulcin Gulten, James N Glosli, César A López, Tomas Oppelstrup, Chris Neale, Sandrasegaram Gnanakaran, William K Gillette, Helgi I Ingólfsson, Felice C Lightstone, Andrew G Stephen, Frederick H Streitz, Dwight V Nissley, Thomas J Turbyville
Membrane lipids drive formation of KRAS4b-RAF1 RBDCRD nanoclusters on the membrane. Communications biology 7 (1) (2024)
Rebika Shrestha, Timothy S Carpenter, Que N Van, Constance Agamasu, Marco Tonelli, Fikret Aydin, De Chen, Gulcin Gulten, James N Glosli, César A López, Tomas Oppelstrup, Chris Neale, Sandrasegaram Gnanakaran, William K Gillette, Helgi I Ingólfsson, Felice C Lightstone, Andrew G Stephen, Frederick H Streitz, Dwight V Nissley, Thomas J Turbyville
Membrane lipids drive formation of KRAS4b-RAF1 RBDCRD nanoclusters on the membrane. Communications biology 7 (1) (2024)
Rebika Shrestha, Timothy S Carpenter, Que N Van, Constance Agamasu, Marco Tonelli, Fikret Aydin, De Chen, Gulcin Gulten, James N Glosli, César A López, Tomas Oppelstrup, Chris Neale, Sandrasegaram Gnanakaran, William K Gillette, Helgi I Ingólfsson, Felice C Lightstone, Andrew G Stephen, Frederick H Streitz, Dwight V Nissley, Thomas J Turbyville
Membrane lipids drive formation of KRAS4b-RAF1 RBDCRD nanoclusters on the membrane. Communications biology 7 (1) (2024)
Rebika Shrestha, Timothy S Carpenter, Que N Van, Constance Agamasu, Marco Tonelli, Fikret Aydin, De Chen, Gulcin Gulten, James N Glosli, César A López, Tomas Oppelstrup, Chris Neale, Sandrasegaram Gnanakaran, William K Gillette, Helgi I Ingólfsson, Felice C Lightstone, Andrew G Stephen, Frederick H Streitz, Dwight V Nissley, Thomas J Turbyville
Membrane lipids drive formation of KRAS4b-RAF1 RBDCRD nanoclusters on the membrane. Communications biology 7 (1) (2024)
Rebika Shrestha, Timothy S Carpenter, Que N Van, Constance Agamasu, Marco Tonelli, Fikret Aydin, De Chen, Gulcin Gulten, James N Glosli, César A López, Tomas Oppelstrup, Chris Neale, Sandrasegaram Gnanakaran, William K Gillette, Helgi I Ingólfsson, Felice C Lightstone, Andrew G Stephen, Frederick H Streitz, Dwight V Nissley, Thomas J Turbyville
Membrane lipids drive formation of KRAS4b-RAF1 RBDCRD nanoclusters on the membrane. Communications biology 7 (1) (2024)
Rebika Shrestha, Timothy S Carpenter, Que N Van, Constance Agamasu, Marco Tonelli, Fikret Aydin, De Chen, Gulcin Gulten, James N Glosli, César A López, Tomas Oppelstrup, Chris Neale, Sandrasegaram Gnanakaran, William K Gillette, Helgi I Ingólfsson, Felice C Lightstone, Andrew G Stephen, Frederick H Streitz, Dwight V Nissley, Thomas J Turbyville
Membrane lipids drive formation of KRAS4b-RAF1 RBDCRD nanoclusters on the membrane. Communications biology 7 (1) (2024)
Rebika Shrestha, Timothy S Carpenter, Que N Van, Constance Agamasu, Marco Tonelli, Fikret Aydin, De Chen, Gulcin Gulten, James N Glosli, César A López, Tomas Oppelstrup, Chris Neale, Sandrasegaram Gnanakaran, William K Gillette, Helgi I Ingólfsson, Felice C Lightstone, Andrew G Stephen, Frederick H Streitz, Dwight V Nissley, Thomas J Turbyville
Author Correction: Membrane lipids drive formation of KRAS4b-RAF1 RBDCRD nanoclusters on the membrane. Communications biology 7 (1) (2024)
Helgi I Ingólfsson, Harsh Bhatia, Fikret Aydin, Tomas Oppelstrup, Cesar A López, Liam G Stanton, Timothy S Carpenter, Sergio Wong, Francesco Di Natale, Xiaohua Zhang, Joseph Y Moon, Christopher B Stanley, Joseph R Chavez, Kien Nguyen, Gautham Dharuman, Violetta Burns, Rebika Shrestha, Debanjan Goswami, Gulcin Gulten, Que N Van, Arvind Ramanathan, Brian Van Essen, Nicolas W Hengartner, Andrew G Stephen, Thomas Turbyville, Peer-Timo Bremer, Sandrasegaram Gnanakaran, James N Glosli, Felice C Lightstone, Dwight V Nissley, Frederick H Streitz
Machine Learning-Driven Multiscale Modeling: Bridging the Scales with a Next-Generation Simulation Infrastructure. Journal of chemical theory and computation (2023)
Luís Borges-Araújo, Ana C Borges-Araújo, Tugba Nur Ozturk, Daniel P Ramirez-Echemendia, Balázs Fábián, Timothy S Carpenter, Sebastian Thallmair, Jonathan Barnoud, Helgi I Ingólfsson, Gerhard Hummer, D Peter Tieleman, Siewert-Jan Marrink, Paulo Cesar Telles de Souza, Manuel N Melo
Martini 3 Coarse-Grained Force Field for Cholesterol. Journal of chemical theory and computation (2023)
Helgi I Ingólfsson, Harsh Bhatia, Talia Zeppelin, William F Drew Bennett, Kristy A Carpenter, Pin-Chia Hsu, Gautham Dharuman, Peer-Timo Bremer, Birgit Schiøtt, Felice C Lightstone, Timothy S Carpenter
Capturing Biologically Complex Tissue-Specific Membranes at Different Levels of Compositional Complexity. The journal of physical chemistry. B 124 (36) (2020)
Delin Sun, Thasin A Peyear, William F Drew Bennett, Matthew Holcomb, Stewart He, Fangqiang Zhu, Felice C Lightstone, Olaf S Andersen, Helgi I Ingólfsson
Assessing the Perturbing Effects of Drugs on Lipid Bilayers Using Gramicidin Channel-Based In Silico and In Vitro Assays. Journal of medicinal chemistry 63 (20) (2020)
Xiaohua Zhang, Shiv Sundram, Tomas Oppelstrup, Sara I L Kokkila-Schumacher, Timothy S Carpenter, Helgi I Ingólfsson, Frederick H Streitz, Felice C Lightstone, James N Glosli
ddcMD: A fully GPU-accelerated molecular dynamics program for the Martini force field. The Journal of chemical physics 153 (4) (2020)
William F Drew Bennett, Stewart He, Camille L Bilodeau, Derek Jones, Delin Sun, Hyojin Kim, Jonathan E Allen, Felice C Lightstone, Helgi I Ingólfsson
Predicting Small Molecule Transfer Free Energies by Combining Molecular Dynamics Simulations and Deep Learning. Journal of chemical information and modeling 60 (11) (2020)
Delin Sun, Stewart He, William F Drew Bennett, Camille L Bilodeau, Olaf S Andersen, Felice C Lightstone, Helgi I Ingólfsson
Atomistic Characterization of Gramicidin Channel Formation. Journal of chemical theory and computation 17 (1) (2020)
Sean F Gilmore, Timothy S Carpenter, Helgi I Ingólfsson, Sandra K G Peters, Paul T Henderson, Craig D Blanchette, Nicholas O Fischer
Lipid composition dictates serum stability of reconstituted high-density lipoproteins: implications for in vivo applications. Nanoscale 10 (16) (2019)
Harsh Bhatia, Helgi I Ingólfsson, Timothy S Carpenter, Felice C Lightstone, Peer-Timo Bremer
MemSurfer: A Tool for Robust Computation and Characterization of Curved Membranes. Journal of chemical theory and computation 15 (11) (2019)
Chris Dockendorff, Disha M Gandhi, Ian H Kimball, Kenneth S Eum, Radda Rusinova, Helgi I Ingólfsson, Ruchi Kapoor, Thasin Peyear, Matthew W Dodge, Stephen F Martin, Richard W Aldrich, Olaf S Andersen, Jon T Sack
Synthetic Analogues of the Snail Toxin 6-Bromo-2-mercaptotryptamine Dimer (BrMT) Reveal That Lipid Bilayer Perturbation Does Not Underlie Its Modulation of Voltage-Gated Potassium Channels. Biochemistry 57 (18) (2018)
Sebastian Thallmair, Helgi I Ingólfsson, Siewert J Marrink
Cholesterol Flip-Flop Impacts Domain Registration in Plasma Membrane Models. The journal of physical chemistry letters 9 (18) (2018)
Manuel N Melo, Clément Arnarez, Hendrik Sikkema, Neeraj Kumar, Martin Walko, Herman J C Berendsen, Armagan Kocer, Siewert J Marrink, Helgi I Ingólfsson
High-Throughput Simulations Reveal Membrane-Mediated Effects of Alcohols on MscL Gating. Journal of the American Chemical Society 139 (7) (2017)