Georg Seelig

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 29

Top Topics

Convolutional Neural Network

High Throughput Sequencing

Top Venues

Nature communications

bioRxiv : the preprint server for biology

Nature chemical biology

This page only lists publications with an associated author ORCID identifier.

Publications

Alexandr Baryshev, Alyssa La Fleur, Benjamin Groves, Cirstyn Michel, Julien S Baker, Ajasja Ljubetič, Georg Seelig
Massively parallel measurement of protein-protein interactions by sequencing using MP3-seq. Nature chemical biology (2024)
Sebastian Castillo-Hair, Stephen Fedak, Ban Wang, Johannes Linder, Kyle Havens, Michael Certo, Georg Seelig
Optimizing 5'UTRs for mRNA-delivered gene editing using deep learning. Nature communications 15 (1) (2024)
Valentine Cyriaque, Rodrigo Ibarra-Chávez, Anna Kuchina, Georg Seelig, Joseph Nesme, Jonas Stenløkke Madsen
Single-cell RNA sequencing reveals plasmid constrains bacterial population heterogeneity and identifies a non-conjugating subpopulation. Nature communications 15 (1) (2024)
Alexandr Baryshev, Alyssa La Fleur, Benjamin Groves, Cirstyn Michel, Julien S Baker, Ajasja Ljubetič, Georg Seelig
Massively parallel measurement of protein-protein interactions by sequencing using MP3-seq. Nature chemical biology (2024)
Sebastian Castillo-Hair, Stephen Fedak, Ban Wang, Johannes Linder, Kyle Havens, Michael Certo, Georg Seelig
Optimizing 5'UTRs for mRNA-delivered gene editing using deep learning. Nature communications 15 (1) (2024)
Sebastian Castillo-Hair, Stephen Fedak, Ban Wang, Johannes Linder, Kyle Havens, Michael Certo, Georg Seelig
Optimizing 5'UTRs for mRNA-delivered gene editing using deep learning. Nature communications 15 (1) (2024)
Karl D Gaisser, Sophie N Skloss, Leandra M Brettner, Luana Paleologu, Charles M Roco, Alexander B Rosenberg, Matthew Hirano, R William DePaolo, Georg Seelig, Anna Kuchina
High-throughput single-cell transcriptomics of bacteria using combinatorial barcoding. Nature protocols (2024)
Valentine Cyriaque, Rodrigo Ibarra-Chávez, Anna Kuchina, Georg Seelig, Joseph Nesme, Jonas Stenløkke Madsen
Single-cell RNA sequencing reveals plasmid constrains bacterial population heterogeneity and identifies a non-conjugating subpopulation. Nature communications 15 (1) (2024)
Christopher Yin, Sebastian Castillo Hair, Gun Woo Byeon, Peter Bromley, Wouter Meuleman, Georg Seelig
Iterative deep learning-design of human enhancers exploits condensed sequence grammar to achieve cell type-specificity. bioRxiv : the preprint server for biology (2024)
Christopher Yin, Sebastian Castillo Hair, Gun Woo Byeon, Peter Bromley, Wouter Meuleman, Georg Seelig
Iterative deep learning-design of human enhancers exploits condensed sequence grammar to achieve cell type-specificity. bioRxiv : the preprint server for biology (2024)
Bas W A Bögels, Bichlien H Nguyen, David P Ward, Levena Gascoigne, David P Schrijver, Anna-Maria Makri Pistikou, Alex Joesaar, Shuo Yang, Ilja Karina Voets, Willem J M Mulder, Andrew Phillips, Stephen Mann, Georg Seelig, Karin Strauss, Yuan-Jyue Chen, Tom F A de Greef
DNA storage in thermoresponsive microcapsules for repeated random multiplexed data access. Nature nanotechnology (2023)
Liang Liu, Angela M Yu, Xiuye Wang, Lindsey V Soles, Xueyi Teng, Yiling Chen, Yoseop Yoon, Kristianna S K Sarkan, Marielle Cárdenas Valdez, Johannes Linder, Whitney England, Robert C Spitale, Zhaoxia Yu, Ivan Marazzi, Feng Qiao, Weibo Xie, Georg Seelig, Yongsheng Shi
The anticancer compound JTE-607 reveals hidden sequence specificity of the mRNA 3' processing machinery. Nature structural & molecular biology 30 (12) (2023)
Alexander Baryshev, Alyssa La Fleur, Benjamin Groves, Cirstyn Michel, David Baker, Ajasja Ljubetiƒç, Georg Seelig
Massively parallel protein-protein interaction measurement by sequencing (MP3-seq) enables rapid screening of protein heterodimers. bioRxiv : the preprint server for biology (2023)
Madalena M Reimão-Pinto, Sebastian Castillo Hair, Georg Seelig, Alex F Schier
The regulatory landscape of 5' UTRs in translational control during zebrafish embryogenesis. bioRxiv : the preprint server for biology (2023)
Alexander Baryshev, Alyssa La Fleur, Benjamin Groves, Cirstyn Michel, David Baker, Ajasja Ljubetiƒç, Georg Seelig
Massively parallel protein-protein interaction measurement by sequencing (MP3-seq) enables rapid screening of protein heterodimers. bioRxiv : the preprint server for biology (2023)
Alexander Baryshev, Alyssa La Fleur, Benjamin Groves, Cirstyn Michel, David Baker, Ajasja Ljubetiƒç, Georg Seelig
Massively parallel protein-protein interaction measurement by sequencing (MP3-seq) enables rapid screening of protein heterodimers. bioRxiv : the preprint server for biology (2023)
Karen Zhang, Yuan-Jyue Chen, Delaney S Wilde, Kathryn Doroschak, Karin Strauss, Luis Ceze, Georg Seelig, Jeff Nivala
A nanopore interface for higher bandwidth DNA computing. Nature communications 13 (1) (2022)
Alberto Carignano, Dai Hua Chen, Cannon Mallory, R Clay Wright, Georg Seelig, Eric Klavins
Modular, robust, and extendible multicellular circuit design in yeast. eLife 11 (2022)
Johannes Linder, Samantha E Koplik, Anshul Kundaje, Georg Seelig
Deciphering the impact of genetic variation on human polyadenylation using APARENT2. Genome biology 23 (1) (2022)
Callista Bee, Yuan-Jyue Chen, Melissa Queen, David P Ward, Xiaomeng Liu, Lee Organick, Georg Seelig, Karin Strauss, Luis Ceze
Molecular-level similarity search brings computing to DNA data storage. Nature communications 12 (1) (2021)
Sebastian Castillo Hair, Georg Seelig
Machine Learning for Designing Next-Generation mRNA Therapeutics. Accounts of chemical research 55 (1) (2021)
Yuan-Jyue Chen, Christopher N Takahashi, Lee Organick, Callista Bee, Siena Dumas Ang, Patrick Weiss, Bill Peck, Georg Seelig, Luis Ceze, Karin Strauss
Quantifying molecular bias in DNA data storage. Nature communications 11 (1) (2020)
Anna Kuchina, Leandra M Brettner, Luana Paleologu, Charles M Roco, Alexander B Rosenberg, Alberto Carignano, Ryan D Kibler, Matthew Hirano, R William DePaolo, Georg Seelig
Microbial single-cell RNA sequencing by split-pool barcoding. Science (New York, N.Y.) 371 (6531) (2020)
Paul J Sample, Ban Wang, David W Reid, Vlad Presnyak, Iain J McFadyen, David R Morris, Georg Seelig
Human 5' UTR design and variant effect prediction from a massively parallel translation assay. Nature biotechnology 37 (7) (2019)
Randolph Lopez, Yuan-Jyue Chen, Siena Dumas Ang, Sergey Yekhanin, Konstantin Makarychev, Miklos Z Racz, Georg Seelig, Karin Strauss, Luis Ceze
DNA assembly for nanopore data storage readout. Nature communications 10 (1) (2019)
Alexander B Rosenberg, Charles M Roco, Richard A Muscat, Anna Kuchina, Paul J Sample, Zizhen Yao, Lucas T Gray, David J Peeler, Sumit Mukherjee, Wei Chen, Suzie H Pun, Drew L Sellers, Bosiljka Tasic, Georg Seelig
Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding. Science (New York, N.Y.) 360 (6385) (2018)
Randolph Lopez, Ruofan Wang, Georg Seelig
A molecular multi-gene classifier for disease diagnostics. Nature chemistry 10 (7) (2018)
Gourab Chatterjee, Yuan-Jyue Chen, Georg Seelig
Nucleic Acid Strand Displacement with Synthetic mRNA Inputs in Living Mammalian Cells. ACS synthetic biology 7 (12) (2018)
Benjamin Groves, Arjun Khakhar, Cory M Nadel, Richard G Gardner, Georg Seelig
Rewiring MAP kinases in Saccharomyces cerevisiae to regulate novel targets through ubiquitination. eLife 5 (2016)