Jae Young Choi (Jae Y Choi)

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2016-2023
Publications (10 Years): 16

Top Venues

PLoS genetics

bioRxiv : the preprint server for biology

Molecular biology and evolution

Genome biology

New York University

Cornell University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

New York University Jan 01 2016

United States

Postdoc :: Center for Genomics and Systems Biology

Education History

Cornell University

United States

PHD :: Molecular Biology and Genetics

Publications

Surbhi Kumawat, Irene Martinez, Dhenugen Logeswaran, Hongfei Chen, Jenn M Coughlan, Julian J-L Chen, Yaowu Yuan, James M Sobel, Jae Young Choi
Transposition, duplication, and divergence of the telomerase RNA underlies the evolution of Mimulus telomeres. bioRxiv : the preprint server for biology (2023)
Surbhi Kumawat, Irene Martinez, Dhenugen Logeswaran, Hongfei Chen, Jenn M Coughlan, Julian J-L Chen, Yaowu Yuan, James M Sobel, Jae Young Choi
Transposition, duplication, and divergence of the telomerase RNA underlies the evolution of Mimulus telomeres. bioRxiv : the preprint server for biology (2023)
Surbhi Kumawat, Jae Young Choi
ulpNo end in sight, mysteries of the telomeric variation in plants. American journal of botany (2023)
Edward G Smith, Khaled Michel Hazzouri, Jae Young Choi, Patrice Delaney, Mohammed Al-Kharafi, Emily J Howells, Manuel Aranda, John A Burt
Signatures of selection underpinning rapid coral adaptation to the world's warmest reefs. Science advances 8 (2) (2022)
Zoe Lye, Jae Young Choi, Michael D Purugganan
Deleterious Mutations and the Rare Allele Burden on Rice Gene Expression. Molecular biology and evolution 39 (9) (2022)
Jae Young Choi, Xiaoguang Dai, Ornob Alam, Julie Z Peng, Priyesh Rughani, Scott Hickey, Eoghan Harrington, Sissel Juul, Julien F Ayroles, Michael D Purugganan, Elizabeth A Stacy
Ancestral polymorphisms shape the adaptive radiation of Metrosideros across the Hawaiian Islands. Proceedings of the National Academy of Sciences of the United States of America 118 (37) (2021)
Jae Young Choi, Liliia R Abdulkina, Jun Yin, Inna B Chastukhina, John T Lovell, Inna A Agabekian, Pierce G Young, Samsad Razzaque, Dorothy E Shippen, Thomas E Juenger, Eugene V Shakirov, Michael D Purugganan
Natural variation in plant telomere length is associated with flowering time. The Plant cell 33 (4) (2021)
Jae Young Choi, Zoe N Lye, Simon C Groen, Xiaoguang Dai, Priyesh Rughani, Sophie Zaaijer, Eoghan D Harrington, Sissel Juul, Michael D Purugganan
Nanopore sequencing-based genome assembly and evolutionary genomics of circum-basmati rice. Genome biology 21 (1) (2020)
Dong-Jin Shin, Sichul Lee, Tae-Heon Kim, Jong-Hee Lee, Joonheum Park, Jinwon Lee, Ji Yoon Lee, Lae-Hyeon Cho, Jae Young Choi, Wonhee Lee, Ji-Hwan Park, Dae-Woo Lee, Hisashi Ito, Dae Heon Kim, Ayumi Tanaka, Jun-Hyeon Cho, You-Chun Song, Daehee Hwang, Michael D Purugganan, Jong-Seong Jeon, Gynheung An, Hong Gil Nam
Natural variations at the Stay-Green gene promoter control lifespan and yield in rice cultivars. Nature communications 11 (1) (2020)
Rafal M Gutaker, Simon Cornelis Groen, Emily S Bellis, Jae Young Choi, Inês S Pires, R Kyle Bocinsky, Emma R Slayton, Olivia Wilkins, Cristina C Castillo, Sónia Negrão, Maria Margarida Oliveira, Dorian Q Fuller, Jade A d'Alpoim Guedes, Jesse R Lasky, Michael D Purugganan
Genomic history and ecology of the geographic spread of rice. Nature plants 6 (5) (2020)
Jae Young Choi, Yuh Chwen G Lee
Double-edged sword: The evolutionary consequences of the epigenetic silencing of transposable elements. PLoS genetics 16 (7) (2020)
Qanber Raza, Jae Young Choi, Yang Li, Roisin M O'Dowd, Simon C Watkins, Maria Chikina, Yang Hong, Nathan L Clark, Adam V Kwiatkowski
Evolutionary rate covariation analysis of E-cadherin identifies Raskol as a regulator of cell adhesion and actin dynamics in Drosophila. PLoS genetics 15 (2) (2019)
Jae Young Choi, Maricris Zaidem, Rafal M Gutaker, Katherine Dorph, Rakesh Kumar Singh, Michael D Purugganan
The complex geography of domestication of the African rice Oryza glaberrima. PLoS genetics 15 (3) (2019)
Li-Yu Chen, Robert VanBuren, Margot Paris, Hongye Zhou, Xingtan Zhang, Ching Man Jennifer Wai, Hansong Yan, Shuai Chen, Michael Alonge, Srividya Ramakrishnan, Zhenyang Liao, Juan Liu, Jishan Lin, Jingjing Yue, Mahpara Fatima, Zhicong Lin, Jisen Zhang, Lixian Huang, Hao Wang, Teh-Yang Hwa, Shu-Min Kao, Jae Young Choi, Anupma Sharma, Jian Song, Lulu Wang, Won Cheol Yim, John C Cushman, Robert E Paull, Tracie Matsumoto, Yuan Qin, Qingsong Wu, Jianping Wang, Qingyi Yu, Jun Wu, Shaoling Zhang, Peter Boches, Chih-Wei Tung, Ming-Li Wang, Geo Coppens d'Eeckenbrugge, Garth M Sanewski, Michael D Purugganan, Michael C Schatz, Jeffrey L Bennetzen, Christian Lexer, Ray Ming
The bracteatus pineapple genome and domestication of clonally propagated crops. Nature genetics 51 (10) (2019)
Jae Young Choi, Michael D Purugganan
Multiple Origin but Single Domestication Led to Oryza sativa. G3 (Bethesda, Md.) 8 (3) (2018)
Jae Young Choi, Charles F Aquadro
Recent and Long-Term Selection Across Synonymous Sites in Drosophila ananassae. Journal of molecular evolution 83 (1-2) (2016)

Jae Young Choi.css-eqlu8i{font-size:small;padding-left:4px;} (Jae Y Choi)

Publication Activity (10 Years)

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Jae Young Choi (Jae Y Choi)