James Whelan

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 40

Top Venues

Plant physiology

The Plant journal : for cell and molecular biology

The Plant cell

The New phytologist

La Trobe University

This page only lists publications with an associated author ORCID identifier.

Affiliation History

La Trobe University

Australia

Director RFA Securiing Food Water and the Environment :: AgrioBio, the Centre for AgriBioscience

Publications

Yanqiao Zhu, Reena Narsai, Cunman He, Zorana Štaka, Chen Bai, Oliver Berkowitz, Lim Chee Liew, James Whelan
Overexpression of the transcription factor ANAC017 results in a genomes uncoupled phenotype under lincomycin. The Plant journal : for cell and molecular biology (2024)
Ricarda Jost, Oliver Berkowitz, Amelia Pegg, Bhavna Hurgobin, Muluneh Tamiru-Oli, Matthew T Welling, Myrna A Deseo, Hannah Noorda, Filippa Brugliera, Mathew G Lewsey, Monika S Doblin, Antony Tony Bacic, James Whelan
Sink strength, nutrient allocation, cannabinoid yield and associated transcript profiles vary in two drug-type Cannabis chemovars. Journal of experimental botany (2024)
Benjamin Wee Y, Oliver Berkowitz, James Whelan, Ricarda Jost
Same, Yet Different: Towards Understanding Nutrient Use In Hemp- And Drug-Type Cannabis. Journal of experimental botany (2024)
Lim Chee Liew, Yue You, Lucas Auroux, Marina Oliva, Marta Peirats-Llobet, Sophia Ng, Muluneh Tamiru-Oli, Oliver Berkowitz, Uyen Vu Thuy Hong, Asha Haslem, Tim Stuart, Matthew E Ritchie, George W Bassel, Ryan Lister, James Whelan, Quentin A Gouil, Mathew G Lewsey
Establishment of single-cell transcriptional states during seed germination. Nature plants (2024)
Abi S Ghifari, Aneta Ivanova, Oliver Berkowitz, James Whelan, Monika W Murcha
FTSH PROTEASE 3 facilitates complex I degradation through a direct interaction with the complex I subunit PSST. The Plant cell (2023)
Stephanie J Watts-Williams, Stefanie Wege, Sunita A Ramesh, Oliver Berkowitz, Bo Xu, Matthew Gilliham, James Whelan, Stephen D Tyerman
The function of the Medicago truncatula ZIP transporter MtZIP14 is linked to arbuscular mycorrhizal fungal colonization. Plant, cell & environment (2023)
Marta Peirats-Llobet, Changyu Yi, Lim Chee Liew, Oliver Berkowitz, Reena Narsai, Mathew G Lewsey, James Whelan
Spatially resolved transcriptomic analysis of the germinating barley grain. Nucleic acids research (2023)
Ghazanfar Abbas Khan, Arka Dutta, Allison van de Meene, Kristian Erik Høpfner Frandsen, Michael Ogden, James Whelan, Staffan Persson
Phosphate starvation regulates cellulose synthesis to modify root growth. Plant physiology (2023)
Stephanie J Watts-Williams, Stefanie Wege, Sunita A Ramesh, Oliver Berkowitz, Bo Xu, Matthew Gilliham, James Whelan, Stephen D Tyerman
The function of the Medicago truncatula ZIP transporter MtZIP14 is linked to arbuscular mycorrhizal fungal colonisation. Plant, cell & environment (2023)
Pavani P Nadiminti, Sarah M Wilson, Allison van de Meene, Alfie Hao, John Humphries, Julian Ratcliffe, Changyu Yi, Marta Peirats-Llobet, Mathew G Lewsey, James Whelan, Anthony Bacic, Monika S Doblin
Spatiotemporal Deposition of Cell Wall Polysaccharides in Oat Endosperm during Grain Development. Plant physiology (2023)
Cunman He, Lim Chee Liew, Lingling Yin, Mathew G Lewsey, James Whelan, Oliver Berkowitz
The retrograde signaling regulator ANAC017 recruits the MKK9-MPK3/6, ethylene, and auxin signaling pathways to balance mitochondrial dysfunction with growth. The Plant cell 34 (9) (2022)
Ying Li, Katharina Belt, Saad F Alqahtani, Saurabh Saha, Ricarda Fenske, Olivier Van Aken, James Whelan, A Harvey Millar, Monika W Murcha, Shao Bai Huang
The mitochondrial LYR protein SDHAF1 is required for succinate dehydrogenase activity in Arabidopsis. The Plant journal : for cell and molecular biology 110 (2) (2022)
Andreas Hartmann, Jennifer Selinski, James Whelan, Reena Narsai
Cross-species transcriptomic analyses reveals common and opposite responses in Arabidopsis, rice and barley following oxidative stress and hormone treatment. BMC plant biology 22 (1) (2022)
Xiangxiang Meng, Lu Li, Jesús Pascual, Moona Rahikainen, Changyu Yi, Ricarda Jost, Cunman He, Alexandre Fournier-Level, Justin O Borevitz, Saijaliisa Kangasjärvi, James Whelan, Oliver Berkowitz
GWAS on multiple traits identifies mitochondrial ACONITASE3 as important for acclimation to submergence stress. Plant physiology 188 (4) (2022)
Aneta Ivanova, Brendan M O'Leary, Santiago Signorelli, Denis Falconet, Daniela Moyankova, James Whelan, Dimitar Djilianov, Monika W Murcha
Mitochondrial activity and biogenesis during resurrection of Haberlea rhodopensis. The New phytologist 236 (3) (2022)
Jesús Pascual, Moona Rahikainen, Martina Angeleri, Sara Alegre, Richard Gossens, Alexey Shapiguzov, Arttu Heinonen, Andrea Trotta, Guido Durian, Zsófia Winter, Jari Sinkkonen, Jaakko Kangasjärvi, James Whelan, Saijaliisa Kangasjärvi
ACONITASE 3 is part of theANAC017 transcription factor-dependent mitochondrial dysfunction response. Plant physiology 186 (4) (2022)
Runze Guo, Qi Zhang, Yinghui Ying, Wenying Liao, Yu Liu, James Whelan, Chuan-Zao Mao, Huixia Shou
Functional characterization of the three Oryza sativa SPX-MFS proteins in maintaining phosphate homoeostasis. Plant, cell & environment (2022)
Aneta Ivanova, Abi S Ghifari, Oliver Berkowitz, James Whelan, Monika W Murcha
The mitochondrial AAA protease FTSH3 regulates Complex I abundance by promoting its disassembly. Plant physiology 186 (1) (2022)
Yue Qu, Rong-Xia Guan, Lili Yu, Oliver Berkowitz, Rakesh David, James Whelan, Melanie Ford, Stefanie Wege, Lijuan Qiu, Matthew Gilliham
Enhanced reactive oxygen detoxification occurs in salt-stressed soybean roots expressing GmSALT3. Physiologia plantarum 174 (3) (2022)
Changyu Yi, Xin-Chao Wang, Qian Chen, Damien L Callahan, Alexandre Fournier-Level, James Whelan, Ricarda Jost
Diverse phosphate and auxin transport loci distinguish phosphate tolerant from sensitive Arabidopsis accessions. Plant physiology 187 (4) (2022)
Wujian Wang, Jun Ye, Heng Xu, Xi Liu, Yue Fu, Hui Zhang, Hatem Rouached, James Whelan, Zhenguo Shen, Luqing Zheng
OsbHLH061 links TOPLESS/TOPLESS-RELATED repressor proteins with POSITIVE REGULATOR OF IRON HOMEOSTASIS 1 to maintain iron homeostasis in rice. The New phytologist 234 (5) (2022)
Bhavna Hurgobin, Muluneh Tamiru-Oli, Matthew T Welling, Monika S Doblin, Anthony Bacic, James Whelan, Mathew G Lewsey
Recent advances in Cannabis sativa genomics research. The New phytologist 230 (1) (2021)
Oliver Berkowitz, Yue Xu, Lim Chee Liew, Yan Wang, Yanqiao Zhu, Bhavna Hurgobin, Mathew G Lewsey, James Whelan
RNA-seq analysis of laser microdissected Arabidopsis thaliana leaf epidermis, mesophyll and vasculature defines tissue-specific transcriptional responses to multiple stress treatments. The Plant journal : for cell and molecular biology 107 (3) (2021)
Shuo Sun, Jiamei Zhu, Runze Guo, James Whelan, Huixia Shou
DNA methylation is involved in acclimation to iron-deficiency in rice (Oryza sativa). The Plant journal : for cell and molecular biology 107 (3) (2021)
Nathan D Tivendale, Katharina Belt, Oliver Berkowitz, James Whelan, A Harvey Millar, Shao Bai Huang
Knockdown of Succinate Dehydrogenase Assembly Factor 2 Induces Reactive Oxygen Species-Mediated Auxin Hypersensitivity Causing pH-Dependent Root Elongation. Plant & cell physiology 62 (7) (2021)
Xiangxiang Meng, Lu Li, Reena Narsai, Inge De Clercq, James Whelan, Oliver Berkowitz
Mitochondrial signalling is critical for acclimation and adaptation to flooding in Arabidopsis thaliana. The Plant journal : for cell and molecular biology 103 (1) (2020)
Shoudong Wang, Lin Li, Yinghui Ying, Jin Wang, Ji Feng Shao, Naoki Yamaji, James Whelan, Jian Feng Ma, Huixia Shou
A transcription factor OsbHLH156 regulates Strategy II iron acquisition through localising IRO2 to the nucleus in rice. The New phytologist 225 (3) (2019)
Marina Borges Osorio, Sophia Ng, Oliver Berkowitz, Inge De Clercq, Chuan-Zao Mao, Huixia Shou, James Whelan, Ricarda Jost
SPX4 Acts on PHR1-Dependent and -Independent Regulation of Shoot Phosphorus Status in Arabidopsis. Plant physiology 181 (1) (2019)
Lim Chee Liew, Reena Narsai, Yan Wang, Oliver Berkowitz, James Whelan, Mathew G Lewsey
Temporal tissue-specific regulation of transcriptomes during barley (Hordeum vulgare) seed germination. The Plant journal : for cell and molecular biology 101 (3) (2019)
Xiangxiang Meng, Lu Li, Inge De Clercq, Reena Narsai, Yue Xu, Andreas Hartmann, Diego Lozano Claros, Eddie Custovic, Mathew G Lewsey, James Whelan, Oliver Berkowitz
ANAC017 Coordinates Organellar Functions and Stress Responses by Reprogramming Retrograde Signaling. Plant physiology 180 (1) (2019)
Lu Li, Anastasiya Lavell, Xiangxiang Meng, Oliver Berkowitz, Jennifer Selinski, Allison van de Meene, Chris Carrie, Christoph Benning, James Whelan, Inge De Clercq, Yan Wang
Arabidopsis DGD1 SUPPRESSOR1 Is a Subunit of the Mitochondrial Contact Site and Cristae Organizing System and Affects Mitochondrial Biogenesis. The Plant cell 31 (8) (2019)
Aneta Ivanova, Mabel Gill-Hille, Shao Bai Huang, Rui Mamede Branca, Beata Kmiec, Pedro F Teixeira, Janne Lehtiö, James Whelan, Monika W Murcha
A Mitochondrial LYR Protein Is Required for Complex I Assembly. Plant physiology 181 (4) (2019)
Shoudong Wang, Kengo Yokosho, Runze Guo, James Whelan, Yong-Ling Ruan, Jian Feng Ma, Huixia Shou
The Soybean Sugar Transporter GmSWEET15 Mediates Sucrose Export from Endosperm to Early Embryo. Plant physiology 180 (4) (2019)
Mohamed Hanchi, Marie-Christine Thibaud, Bertrand Légeret, Keiko Kuwata, Nathalie Pochon, Frédéric Beisson, Aiqin Cao, Laura Cuyas, Pascale David, Peter Doerner, Ali Ferjani, Fan Lai, Yonghua Li-Beisson, Jerome Mutterer, Michel Philibert, Kashchandra G Raghothama, Corinne Rivasseau, David Secco, James Whelan, Laurent Nussaume, Hélène Javot
The Phosphate Fast-Responsive Genes PECP1 and PPsPase1 Affect Phosphocholine and Phosphoethanolamine Content. Plant physiology 176 (4) (2018)
Chunlan Dong, Fei He, Oliver Berkowitz, Jingxian Liu, Pengfei Cao, Min Tang, Huichao Shi, Wujian Wang, Qiaolu Li, Zhenguo Shen, James Whelan, Luqing Zheng
Alternative Splicing Plays a Critical Role in Maintaining Mineral Nutrient Homeostasis in Rice (Oryza sativa). The Plant cell 30 (10) (2018)
Xinhua Zhang, Aneta Ivanova, Klaas Vandepoele, Jordan Radomiljac, Jan Van de Velde, Oliver Berkowitz, Patrick Willems, Yue Xu, Sophia Ng, Olivier Van Aken, Owen Duncan, Botao Zhang, Veronique Storme, Kai Xun Chan, Dries Vaneechoutte, Barry James Pogson, Frank Van Breusegem, James Whelan, Inge De Clercq
The Transcription Factor MYB29 Is a Regulator of ALTERNATIVE OXIDASE1a. Plant physiology 173 (3) (2017)
Joshua Linn, Meiyan Ren, Oliver Berkowitz, Wona Ding, Margaretha J van der Merwe, James Whelan, Ricarda Jost
Root Cell-Specific Regulators of Phosphate-Dependent Growth. Plant physiology 174 (3) (2017)
Jennifer Selinski, Andreas Hartmann, Adrian Kordes, Gabriele Deckers-Hebestreit, James Whelan, Renate Scheibe
Analysis of Posttranslational Activation of Alternative Oxidase Isoforms. Plant physiology 174 (4) (2017)
Zhubing Hu, Rudy Vanderhaeghen, Toon Cools, Yan Wang, Inge De Clercq, Olivier Leroux, Long Nguyen, Katharina Belt, A Harvey Millar, Dominique Audenaert, Pierre Hilson, Ian D Small, Grégory Mouille, Samantha Vernhettes, Frank Van Breusegem, James Whelan, Herman Höfte, Lieven De Veylder
Mitochondrial Defects Confer Tolerance against Cellulose Deficiency. The Plant cell 28 (9) (2016)
Daria Chrobok, Simon R Law, Bastiaan Brouwer, Pernilla Lindén, Agnieszka Ziolkowska, Daniela Liebsch, Reena Narsai, Bozena Szal, Thomas Moritz, Nicolas Rouhier, James Whelan, Per Gardeström, Olivier Keech
Dissecting the Metabolic Role of Mitochondria during Developmental Leaf Senescence. Plant physiology 172 (4) (2016)
Elke Ströher, Julia Grassl, Chris Carrie, Ricarda Fenske, James Whelan, A Harvey Millar
Glutaredoxin S15 Is Involved in Fe-S Cluster Transfer in Mitochondria Influencing Lipoic Acid-Dependent Enzymes, Plant Growth, and Arsenic Tolerance in Arabidopsis. Plant physiology 170 (3) (2015)

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Publication Activity (10 Years)

Top Topics

Top Venues

James Whelan