Tim Stuart

ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 13

Top Venues

Nature biotechnology

Biochemical Society transactions

Nature plants

Genome research

New York Genome Center

ARC Centre of Excellence in Plant Energy Biology (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

New York Genome Center Mar 12 2018

United States

Postdoctoral fellow

Education History

ARC Centre of Excellence in Plant Energy Biology - Mar 01 2018

Australia

PHD

University of Western Australia

Australia

BSC :: Chemistry and Biochemistry

University of Western Australia

Australia

BSC :: Chemistry and Biochemistry

Publications

Tim Stuart
Progress in multifactorial single-cell chromatin profiling methods. Biochemical Society transactions 52 (4) (2024)
Tim Stuart
Progress in multifactorial single-cell chromatin profiling methods. Biochemical Society transactions (2024)
Lim Chee Liew, Yue You, Lucas Auroux, Marina Oliva, Marta Peirats-Llobet, Sophia Ng, Muluneh Tamiru-Oli, Oliver Berkowitz, Uyen Vu Thuy Hong, Asha Haslem, Tim Stuart, Matthew E Ritchie, George W Bassel, Ryan Lister, James Whelan, Quentin A Gouil, Mathew G Lewsey
Establishment of single-cell transcriptional states during seed germination. Nature plants (2024)
Yuhan Hao, Tim Stuart, Madeline H Kowalski, Saket Choudhary, Paul J Hoffman, Austin Hartman, Avi Srivastava, Gesmira Molla, Shaista Madad, Carlos Fernandez-Granda, Rahul Satija
Dictionary learning for integrative, multimodal and scalable single-cell analysis. Nature biotechnology (2023)
Bingjie Zhang, Avi Srivastava, Eleni P Mimitou, Tim Stuart, Ivan Raimondi, Yuhan Hao, Peter Smibert, Rahul Satija
Characterizing cellular heterogeneity in chromatin state with scCUT&Tag-pro. Nature biotechnology 40 (8) (2022)
Tim Stuart, Stephanie Hao, Bingjie Zhang, Levan Mekerishvili, Dan A Landau, Silas Maniatis, Rahul Satija, Ivan Raimondi
Nanobody-tethered transposition enables multifactorial chromatin profiling at single-cell resolution. Nature biotechnology (2022)
Tim Stuart, Stephanie Hao, Bingjie Zhang, Levan Mekerishvili, Dan A Landau, Silas Maniatis, Rahul Satija, Ivan Raimondi
Nanobody-tethered transposition enables multifactorial chromatin profiling at single-cell resolution. Nature biotechnology (2022)
Tim Stuart, Avi Srivastava, Shaista Madad, Caleb A Lareau, Rahul Satija
Single-cell chromatin state analysis with Signac. Nature methods 18 (11) (2021)
Tim Stuart, Rahul Satija
Integrative single-cell analysis. Nature reviews. Genetics 20 (5) (2019)
Wei Wang, Xiang Niu, Tim Stuart, Estelle Jullian, William M Mauck, Robert G Kelly, Rahul Satija, Lionel A Christiaen
A single-cell transcriptional roadmap for cardiopharyngeal fate diversification. Nature cell biology 21 (6) (2019)
Tim Stuart, Steven R Eichten, Jonathan Cahn, Yuliya V Karpievitch, Justin O Borevitz, Ryan Lister
Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation. eLife 5 (2016)
Taiji Kawakatsu, Tim Stuart, Manuel Valdes, Natalie W Breakfield, Robert J Schmitz, Joseph R Nery, Mark A Urich, Xinwei Han, Ryan Lister, Philip N Benfey, Joseph R Ecker
Unique cell-type-specific patterns of DNA methylation in the root meristem. Nature plants 2 (5) (2016)
Steven R Eichten, Tim Stuart, Akanksha Srivastava, Ryan Lister, Justin O Borevitz
DNA methylation profiles of diverse Brachypodium distachyon align with underlying genetic diversity. Genome research 26 (11) (2016)

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Publication Activity (10 Years)

Top Topics

Top Venues

Tim Stuart