Jiayu Shang

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 8

Top Topics

Escherichia Coli

Top Venues

Bioinformatics (Oxford, England)

Molecular biology and evolution

Briefings in bioinformatics

Bioinformatics advances

This page only lists publications with an associated author ORCID identifier.

Publications

Xubo Tang, Jiayu Shang, Guowei Chen, Kei-Hang Katie Chan, Mang Shi, Yanni Sun
SegVir: Reconstruction of Complete Segmented RNA Viral Genomes from Metatranscriptomes. Molecular biology and evolution 41 (8) (2024)
Xubo Tang, Jiayu Shang, Guowei Chen, Kei-Hang Katie Chan, Mang Shi, Yanni Sun
SegVir: Reconstruction of Complete Segmented RNA Viral Genomes from Metatranscriptomes. Molecular biology and evolution 41 (8) (2024)
Jiayu Shang, Cheng Peng, Herui Liao, Xubo Tang, Yanni Sun
PhaBOX: a web server for identifying and characterizing phage contigs in metagenomic data. Bioinformatics advances 3 (1) (2023)
Jiayu Shang, Cheng Peng, Xubo Tang, Yanni Sun
PhaVIP: Phage VIrion Protein classification based on chaos game representation and Vision Transformer. Bioinformatics (Oxford, England) 39 (39 Suppl 1) (2023)
Xubo Tang, Jiayu Shang, Yongxin Ji, Yanni Sun
PLASMe: a tool to identify PLASMid contigs from short-read assemblies using transformer. Nucleic acids research (2023)
Yongxin Ji, Jiayu Shang, Xubo Tang, Yanni Sun
HOTSPOT: hierarchical host prediction for assembled plasmid contigs with transformer. Bioinformatics (Oxford, England) 39 (5) (2023)
Yongxin Ji, Jiayu Shang, Xubo Tang, Yanni Sun
HOTSPOT: hierarchical host prediction for assembled plasmid contigs with transformer. Bioinformatics (Oxford, England) 39 (5) (2023)
Jing-Zhe Jiang, Wen-Guang Yuan, Jiayu Shang, Ying-Hui Shi, Li-Ling Yang, Min Liu, Peng Zhu, Tao Jin, Yanni Sun, Li-Hong Yuan
Virus classification for viral genomic fragments using PhaGCN2. Briefings in bioinformatics (2022)