Joseph H Davis

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 35

Top Venues

bioRxiv : the preprint server for biology

Proceedings of the National Academy of Sciences of the United States of America

Nature methods

Nature structural & molecular biology

Massachusetts Institute of Technology

Massachusetts Institute of Technology (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Massachusetts Institute of Technology

United States

Assistant Professor :: Biology

Education History

Massachusetts Institute of Technology

United States

PHD :: Biology

University of California Berkeley

United States

BSC :: Biological Engineering

Publications

Barrett M Powell, Joseph H Davis
Learning structural heterogeneity from cryo-electron sub-tomograms with tomoDRGN. Nature methods (2024)
Barrett M Powell, Joseph H Davis
Learning structural heterogeneity from cryo-electron sub-tomograms with tomoDRGN. Nature methods 21 (8) (2024)
Barrett M Powell, Tyler S Brant, Joseph H Davis, Shyamal Mosalaganti
Rapid structural analysis of bacterial ribosomes in situ . bioRxiv : the preprint server for biology (2024)
Barrett M Powell, Tyler S Brant, Joseph H Davis, Shyamal Mosalaganti
Rapid structural analysis of bacterial ribosomes in situ . bioRxiv : the preprint server for biology (2024)
Alireza Ghanbarpour, Bertina Telusma, Barrett M Powell, Jia Jia Zhang, Isabella Bolstad, Carolyn Vargas, Sandro Keller, Tania A Baker, Robert T Sauer, Joseph H Davis
An asymmetric nautilus-like HflK/C assembly controls FtsH proteolysis of membrane proteins. bioRxiv : the preprint server for biology (2024)
April Lee, Joseph H Davis
NCOA4 initiates ferritinophagy by binding GATE16 using two highly avid short linear interaction motifs. bioRxiv : the preprint server for biology (2024)
Barrett M Powell, Joseph H Davis
Learning structural heterogeneity from cryo-electron sub-tomograms with tomoDRGN. Nature methods (2024)
Barrett M Powell, Joseph H Davis
Learning structural heterogeneity from cryo-electron sub-tomograms with tomoDRGN. Nature methods 21 (8) (2024)
April Lee, Joseph H Davis
NCOA4 initiates ferritinophagy by binding GATE16 using two highly avid short linear interaction motifs. bioRxiv : the preprint server for biology (2024)
Barrett M Powell, Tyler S Brant, Joseph H Davis, Shyamal Mosalaganti
Rapid structural analysis of bacterial ribosomes in situ . bioRxiv : the preprint server for biology (2024)
Barrett M Powell, Tyler S Brant, Joseph H Davis, Shyamal Mosalaganti
Rapid structural analysis of bacterial ribosomes in situ . bioRxiv : the preprint server for biology (2024)
Alireza Ghanbarpour, Bertina Telusma, Barrett M Powell, Jia Jia Zhang, Isabella Bolstad, Carolyn Vargas, Sandro Keller, Tania A Baker, Robert T Sauer, Joseph H Davis
An asymmetric nautilus-like HflK/C assembly controls FtsH proteolysis of membrane proteins. bioRxiv : the preprint server for biology (2024)
Alireza Ghanbarpour, Xue Fei, Tania A Baker, Joseph H Davis, Robert T Sauer
The SspB adaptor drives structural changes in the AAA+ ClpXP protease during ssrA-tagged substrate delivery. Proceedings of the National Academy of Sciences of the United States of America 120 (6) (2023)
Alireza Ghanbarpour, Robert T Sauer, Joseph H Davis
A proteolytic AAA+ machine poised to unfold a protein substrate. bioRxiv : the preprint server for biology (2023)
Alireza Ghanbarpour, Steven E Cohen, Xue Fei, Laurel F Kinman, Tristan A Bell, Jia Jia Zhang, Tania A Baker, Joseph H Davis, Robert T Sauer
A closed translocation channel in the substrate-free AAA+ ClpXP protease diminishes rogue degradation. Nature communications 14 (1) (2023)
Alireza Ghanbarpour, Xue Fei, Tania A Baker, Joseph H Davis, Robert T Sauer
The SspB adaptor drives structural changes in the AAA+ ClpXP protease during ssrA-tagged substrate delivery. Proceedings of the National Academy of Sciences of the United States of America 120 (6) (2023)
Andrew V Grassetti, Mira B May, Joseph H Davis
Application of monolayer graphene to cryo-electron microscopy grids for high-resolution structure determination. bioRxiv : the preprint server for biology (2023)
Alireza Ghanbarpour, Xue Fei, Tania A Baker, Joseph H Davis, Robert T Sauer
The SspB adaptor drives structural changes in the AAA+ ClpXP protease during ssrA-tagged substrate delivery. Proceedings of the National Academy of Sciences of the United States of America 120 (6) (2023)
Alireza Ghanbarpour, Robert T Sauer, Joseph H Davis
A proteolytic AAA+ machine poised to unfold a protein substrate. bioRxiv : the preprint server for biology (2023)
Alireza Ghanbarpour, Robert T Sauer, Joseph H Davis
A proteolytic AAA+ machine poised to unfold a protein substrate. bioRxiv : the preprint server for biology (2023)
Alireza Ghanbarpour, Xue Fei, Tania A Baker, Joseph H Davis, Robert T Sauer
The SspB adaptor drives structural changes in the AAA+ ClpXP protease during ssrA-tagged substrate delivery. Proceedings of the National Academy of Sciences of the United States of America 120 (6) (2023)
Alireza Ghanbarpour, Xue Fei, Tania A Baker, Joseph H Davis, Robert T Sauer
The SspB adaptor drives structural changes in the AAA+ ClpXP protease during ssrA-tagged substrate delivery. Proceedings of the National Academy of Sciences of the United States of America 120 (6) (2023)
Alireza Ghanbarpour, Xue Fei, Tania A Baker, Joseph H Davis, Robert T Sauer
The SspB adaptor drives structural changes in the AAA+ ClpXP protease during ssrA-tagged substrate delivery. Proceedings of the National Academy of Sciences of the United States of America 120 (6) (2023)
Alireza Ghanbarpour, Robert T Sauer, Joseph H Davis
A proteolytic AAA+ machine poised to unfold a protein substrate. bioRxiv : the preprint server for biology (2023)
Alireza Ghanbarpour, Xue Fei, Tania A Baker, Joseph H Davis, Robert T Sauer
The SspB adaptor drives structural changes in the AAA+ ClpXP protease during ssrA-tagged substrate delivery. Proceedings of the National Academy of Sciences of the United States of America 120 (6) (2023)
Alireza Ghanbarpour, Xue Fei, Tania A Baker, Joseph H Davis, Robert T Sauer
The SspB adaptor drives structural changes in the AAA+ ClpXP protease during ssrA-tagged substrate delivery. Proceedings of the National Academy of Sciences of the United States of America 120 (6) (2023)
Jingyu Sun, Laurel F Kinman, Dushyant Jahagirdar, Joaquin Ortega, Joseph H Davis
KsgA facilitates ribosomal small subunit maturation by proofreading a key structural lesion. Nature structural & molecular biology (2023)
Alireza Ghanbarpour, Xue Fei, Tania A Baker, Joseph H Davis, Robert T Sauer
The SspB adaptor drives structural changes in the AAA+ ClpXP protease during ssrA-tagged substrate delivery. Proceedings of the National Academy of Sciences of the United States of America 120 (6) (2023)
Barrett M Powell, Joseph H Davis
Learning structural heterogeneity from cryo-electron sub-tomograms with tomoDRGN. bioRxiv : the preprint server for biology (2023)
Laurel F Kinman, Barrett M Powell, Ellen D Zhong, Bonnie Berger, Joseph H Davis
Uncovering structural ensembles from single-particle cryo-EM data using cryoDRGN. Nature protocols (2022)
Sriram Subramaniam, Abhay Kotecha, Joseph H Davis
Cryo-EM at ACA 2022. IUCrJ 9 (Pt 6) (2022)
Ellen D Zhong, Tristan Bepler, Bonnie Berger, Joseph H Davis
CryoDRGN: reconstruction of heterogeneous cryo-EM structures using neural networks. Nature methods 18 (2) (2021)
Miao Gui, Meisheng Ma, Erica Sze-Tu, Xiangli Wang, Fujiet Koh, Ellen D Zhong, Bonnie Berger, Joseph H Davis, Susan K Dutcher, Rui Zhang, Alan Brown
Structures of radial spokes and associated complexes important for ciliary motility. Nature structural & molecular biology 28 (1) (2020)
Joseph H Davis, James R Williamson
Structure and dynamics of bacterial ribosome biogenesis. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 372 (1716) (2017)
Yong Zi Tan, Philip R Baldwin, Joseph H Davis, James R Williamson, Clinton S Potter, Bridget Carragher, Dmitry Lyumkis
Addressing preferred specimen orientation in single-particle cryo-EM through tilting. Nature methods 14 (8) (2017)

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Publication Activity (10 Years)

Top Topics

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Joseph H Davis