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Joshua T Vogelstein (Joshua Vogelstein)

ORCID

Publication Activity (10 Years)

Years Active: 2019-2023
Publications (10 Years): 23

Top Venues

Science (New York, N.Y.)

eLife

Nature methods

bioRxiv : the preprint server for biology

Johns Hopkins

Johns Hopkins School of Medicine (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Johns Hopkins

United States

Assistant Professor :: Biomedical Engineering

Education History

Johns Hopkins School of Medicine

United States

PHD :: Neuroscience

Publications

Ting Xu, Gregory Kiar, Jae Wook Cho, Eric W Bridgeford, Aki Nikolaidis, Joshua T Vogelstein, Michael Peter Milham
ReX: an integrative tool for quantifying and optimizing measurement reliability for the study of individual differences. Nature methods (2023)
Michael Winding, Benjamin D Pedigo, Christopher L Barnes, Heather G Patsolic, Youngser Park, Tom Kazimiers, Akira Fushiki, Ingrid V Andrade, Avinash Khandelwal, Javier Valdes-Aleman, Feng Li, Nadine Randel, Elizabeth Barsotti, Ana Correia, Richard D Fetter, Volker Hartenstein, Carey E Priebe, Joshua T Vogelstein, Albert Cardona, Marta Zlatic
The connectome of an insect brain. Science (New York, N.Y.) 379 (6636) (2023)
Michael Winding, Benjamin D Pedigo, Christopher L Barnes, Heather G Patsolic, Youngser Park, Tom Kazimiers, Akira Fushiki, Ingrid V Andrade, Avinash Khandelwal, Javier Valdes-Aleman, Feng Li, Nadine Randel, Elizabeth Barsotti, Ana Correia, Richard D Fetter, Volker Hartenstein, Carey E Priebe, Joshua T Vogelstein, Albert Cardona, Marta Zlatic
The connectome of an insect brain. Science (New York, N.Y.) 379 (6636) (2023)
Jaewon Chung, Eric W Bridgeford, Michael Powell, Joshua T Vogelstein
Human Connectomes are Heritable. bioRxiv : the preprint server for biology (2023)
Benjamin D Pedigo, Mike Powell, Eric W Bridgeford, Michael Winding, Carey E Priebe, Joshua T Vogelstein
Generative network modeling reveals quantitative definitions of bilateral symmetry exhibited by a whole insect brain connectome. eLife 12 (2023)
Thomas L Athey, Matthew A Wright, Marija Pavlovic, Vikram Chandrashekhar, Karl Deisseroth, Michael I Miller, Joshua T Vogelstein
BrainLine: An Open Pipeline for Connectivity Analysis of Heterogeneous Whole-Brain Fluorescence Volumes. bioRxiv : the preprint server for biology (2023)
Thomas L Athey, Daniel Tward, Ulrich Mueller, Laurent Younes, Joshua T Vogelstein, Michael I Miller
Preserving Derivative Information while Transforming Neuronal Curves. Research square (2023)
Benjamin D Pedigo, Michael Winding, Carey E Priebe, Joshua T Vogelstein
Bisected graph matching improves automated pairing of bilaterally homologous neurons from connectomes. Network neuroscience (Cambridge, Mass.) 7 (2) (2023)
Michael Winding, Benjamin D Pedigo, Christopher L Barnes, Heather G Patsolic, Youngser Park, Tom Kazimiers, Akira Fushiki, Ingrid V Andrade, Avinash Khandelwal, Javier Valdes-Aleman, Feng Li, Nadine Randel, Elizabeth Barsotti, Ana Correia, Richard D Fetter, Volker Hartenstein, Carey E Priebe, Joshua T Vogelstein, Albert Cardona, Marta Zlatic
The connectome of an insect brain. Science (New York, N.Y.) 379 (6636) (2023)
Michael Winding, Benjamin D Pedigo, Christopher L Barnes, Heather G Patsolic, Youngser Park, Tom Kazimiers, Akira Fushiki, Ingrid V Andrade, Avinash Khandelwal, Javier Valdes-Aleman, Feng Li, Nadine Randel, Elizabeth Barsotti, Ana Correia, Richard D Fetter, Volker Hartenstein, Carey E Priebe, Joshua T Vogelstein, Albert Cardona, Marta Zlatic
The connectome of an insect brain. Science (New York, N.Y.) 379 (6636) (2023)
Thomas L Athey, Matthew A Wright, Marija Pavlovic, Vikram Chandrashekhar, Karl Deisseroth, Michael I Miller, Joshua T Vogelstein
BrainLine: An Open Pipeline for Connectivity Analysis of Heterogeneous Whole-Brain Fluorescence Volumes. bioRxiv : the preprint server for biology (2023)
Thomas L Athey, Daniel J Tward, Ulrich Mueller, Joshua T Vogelstein, Michael I Miller
Hidden Markov modeling for maximum probability neuron reconstruction. Communications biology 5 (1) (2022)
Ketan Mehta, Rebecca F Goldin, David Marchette, Joshua T Vogelstein, Carey E Priebe, Giorgio A Ascoli
Neuronal classification from network connectivity via adjacency spectral embedding. Network neuroscience (Cambridge, Mass.) 5 (3) (2021)
Allison Koenecke, Michael Powell, Ruoxuan Xiong, Zhu Shen, Nicole Fischer, Sakibul Huq, Adham M Khalafallah, Marco Trevisan, Pär Sparen, Juan J Carrero, Akihiko Nishimura, Brian Caffo, Elizabeth A Stuart, Renyuan Bai, Verena Staedtke, David L Thomas, Nickolas Papadopoulos, Ken W Kinzler, Bert Vogelstein, Shibin Zhou, Chetan Bettegowda, Maximilian Ferdinand Konig, Brett D Mensh, Joshua T Vogelstein, Susan Athey
Alpha-1 adrenergic receptor antagonists to prevent hyperinflammation and death from lower respiratory tract infection. eLife 10 (2021)
Austin R Graves, Richard H Roth, Han L Tan, Qianwen Zhu, Alexei M Bygrave, Elena Lopez-Ortega, Ingie Hong, Alina C Spiegel, Richard C Johnson, Joshua T Vogelstein, Daniel J Tward, Michael I Miller, Richard L Huganir
Visualizing synaptic plasticity in vivo by large-scale imaging of endogenous AMPA receptors. eLife 10 (2021)
Vikram Chandrashekhar, Daniel J Tward, Devin Crowley, Ailey K Crow, Matthew A Wright, Brian Y Hsueh, Felicity Gore, Timothy A Machado, Audrey Branch, Jared Spencer Rosenblum, Karl Deisseroth, Joshua T Vogelstein
CloudReg: automatic terabyte-scale cross-modal brain volume registration. Nature methods 18 (8) (2021)
Joshua T Vogelstein, Eric W Bridgeford, Minh Tang, Da Zheng, Christopher Douville, Randal Burns, Mauro Maggioni
Supervised dimensionality reduction for big data. Nature communications 12 (1) (2021)
Eric W Bridgeford, Shangsi Wang, Zeyi Wang, Ting Xu, Richard C Craddock, Jayanta Dey, Gregory Kiar, William Gray-Roncal, Carlo Colantuoni, Christopher Douville, Stephanie Noble, Carey E Priebe, Brian Caffo, Michael Peter Milham, Xi-Nian Zuo, null null, Joshua T Vogelstein
Eliminating accidental deviations to minimize generalization error and maximize replicability: Applications in connectomics and genomics. PLoS computational biology 17 (9) (2021)
Ross M Lawrence, Eric W Bridgeford, Patrick E Myers, Ganesh C Arvapalli, Sandhya C Ramachandran, Derek A Pisner, Paige F Frank, Allison D Lemmer, Aki Nikolaidis, Joshua T Vogelstein
Standardizing human brain parcellations. Scientific data 8 (1) (2021)
Marc-Andre Schulz, B T Thomas Yeo, Joshua T Vogelstein, Janaina Mourao-Miranada, Jakob N Kather, Konrad Paul Kording, Blake Aaron Richards, Danilo Bzdok
Different scaling of linear models and deep learning in UKBiobank brain images versus machine-learning datasets. Nature communications 11 (1) (2020)
Joshua T Vogelstein, Eric Perlman, Benjamin Falk, Alex Baden, William Gray Roncal, Vikram Chandrashekhar, Forrest Collman, Sharmishtaa Seshamani, Jesse L Patsolic, Kunal Lillaney, Michael Kazhdan, Robert Hider, Derek Pryor, Jordan Matelsky, Timothy Gion, Priya Manavalan, Brock Wester, Mark Chevillet, Eric T Trautman, Khaled Khairy, Eric Bridgeford, Dean M Kleissas, Daniel J Tward, Ailey K Crow, Brian Hsueh, Matthew A Wright, Michael I Miller, Stephen J Smith, R Jacob Vogelstein, Karl Deisseroth, Randal Burns
A community-developed open-source computational ecosystem for big neuro data. Nature methods 15 (11) (2019)
Carey E Priebe, Youngser Park, Joshua T Vogelstein, John M Conroy, Vince Lyzinski, Minh Tang, Avanti Athreya, Joshua Cape, Eric Bridgeford
On a two-truths phenomenon in spectral graph clustering. Proceedings of the National Academy of Sciences of the United States of America 116 (13) (2019)
Joshua T Vogelstein, Eric W Bridgeford, Qing Wang, Carey E Priebe, Mauro Maggioni, Cencheng Shen
Discovering and deciphering relationships across disparate data modalities. eLife 8 (2019)

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Publication Activity (10 Years)

Top Topics

Top Venues

Joshua T Vogelstein (Joshua Vogelstein)