K Anton Feenstra

Scopus Author ID ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 12

Top Topics

Machine Learning

Molecular Dynamics

Protein Protein

Top Venues

Scientific reports

PLoS computational biology

Bioinformatics (Oxford, England)

This page only lists publications with an associated author ORCID identifier.

Publications

Ting Liu, K Anton Feenstra, Zhisheng Huang, Zhisheng Huang
Mining literature and pathway data to explore the relations of ketamine with neurotransmitters and gut microbiota using a knowledge-graph. Bioinformatics (Oxford, England) 40 (1) (2024)
Ting Liu, K Anton Feenstra, Zhisheng Huang, Zhisheng Huang
Mining literature and pathway data to explore the relations of ketamine with neurotransmitters and gut microbiota using a knowledge-graph. Bioinformatics (Oxford, England) 40 (1) (2024)
Henriette Capel, Robin Weiler, Maurits Dijkstra, Reinier Vleugels, Peter Bloem, K Anton Feenstra
ProteinGLUE multi-task benchmark suite for self-supervised protein modeling. Scientific reports 12 (1) (2022)
Ting Liu, Gongjin Lan, K Anton Feenstra, Zhisheng Huang, Zhisheng Huang
Towards a knowledge graph for pre-/probiotics and microbiota-gut-brain axis diseases. Scientific reports 12 (1) (2022)
Qingzhen Hou, Katharina Waury, Dea Gogishvili, K Anton Feenstra
Ten quick tips for sequence-based prediction of protein properties using machine learning. PLoS computational biology 18 (12) (2022)
Henriette Capel, K Anton Feenstra, Sanne Abeln
Multi-task learning to leverage partially annotated data for PPI interface prediction. Scientific reports 12 (1) (2022)
Christine Orengo, Sameer Velankar, Shoshana Wodak, Vincent Zoete, Alexandre M J J Bonvin, Arne Elofsson, K Anton Feenstra, Dietland L Gerloff, Thomas Hamelryck, John M Hancock, Manuela Helmer-Citterich, Adam Hospital, Modesto Orozco, Anastassis Perrakis, Matthias Rarey, Claudio Soares, Joel L Sussman, Janet M Thornton, Pierre Tuffery, Gabor Tusnady, Rikkert Wierenga, Tiina Salminen, Bohdan Schneider
A community proposal to integrate structural bioinformatics activities in ELIXIR (3D-Bioinfo Community). F1000Research 9 (2020)
Saman Amini, Annika Jacobsen, Olga Ivanova, Philip Lijnzaad, Jaap Heringa, Frank C P Holstege, K Anton Feenstra, Patrick Kemmeren
The ability of transcription factors to differentially regulate gene expression is a crucial component of the mechanism underlying inversion, a frequently observed genetic interaction pattern. PLoS computational biology 15 (5) (2019)
Maurits Dijkstra, Punto Bawono, Sanne Abeln, K Anton Feenstra, Wan Fokkink, Jaap Heringa
Motif-Aware PRALINE: Improving the alignment of motif regions. PLoS computational biology 14 (11) (2018)
Annika Jacobsen, Linda J W Bosch, Sanne R Martens-de Kemp, Beatriz Carvalho, Anke H Sillars-Hardebol, Richard James Butler Dobson, Emanuele de Rinaldis, Gerrit A Meijer, Sanne Abeln, Zhisheng Huang, Remond J A Fijneman, K Anton Feenstra
Aurora kinase A (AURKA) interaction with Wnt and Ras-MAPK signalling pathways in colorectal cancer. Scientific reports 8 (1) (2018)
Qingzhen Hou, Marc F Lensink, Jaap Heringa, K Anton Feenstra
CLUB-MARTINI: Selecting Favourable Interactions amongst Available Candidates, a Coarse-Grained Simulation Approach to Scoring Docking Decoys. PloS one 11 (5) (2016)
Annika Jacobsen, Nika Heijmans, Folkert Verkaar, Martine J Smit, Jaap Heringa, Renee van Amerongen, K Anton Feenstra
Construction and Experimental Validation of a Petri Net Model of Wnt/β-Catenin Signaling. PloS one 11 (5) (2016)