Lingyan Shi (Hongje Jang, L Shi)

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 33

Top Venues

Nature methods

bioRxiv : the preprint server for biology

Current protocols

Biomedical optics express

University of California San Diego

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of California San Diego

United States

Assistant Professor :: Bioengineering

Columbia University Apr 04 2016 - Aug 14 2019

United States

Research Scientsit :: Chemistry

Institute for Ultrafast Spectroscopy and Lasers Jun 01 2014 - Apr 03 2016

United States

Postdoc Research associate

Publications

Michelle S Frei, Samantha A Sanchez, Longwei Liu, Falk Schneider, Zichen Wang, Hiroyuki Hakozaki, Yajuan Li, Anne C Lyons, Theresa V Rohm, Jerrold M Olefsky, Lingyan Shi, Johannes Schöneberg, Scott E Fraser, Sohum Mehta, Yingxiao Wang, Jin Zhang
Far-red chemigenetic biosensors for multi-dimensional and super-resolved kinase activity imaging. bioRxiv : the preprint server for biology (2024)
Michelle S Frei, Samantha A Sanchez, Longwei Liu, Falk Schneider, Zichen Wang, Hiroyuki Hakozaki, Yajuan Li, Anne C Lyons, Theresa V Rohm, Jerrold M Olefsky, Lingyan Shi, Johannes Schöneberg, Scott E Fraser, Sohum Mehta, Yingxiao Wang, Jin Zhang
Far-red chemigenetic biosensors for multi-dimensional and super-resolved kinase activity imaging. bioRxiv : the preprint server for biology (2024)
Michelle S Frei, Samantha A Sanchez, Longwei Liu, Falk Schneider, Zichen Wang, Hiroyuki Hakozaki, Yajuan Li, Anne C Lyons, Theresa V Rohm, Jerrold M Olefsky, Lingyan Shi, Johannes Schöneberg, Scott E Fraser, Sohum Mehta, Yingxiao Wang, Jin Zhang
Far-red chemigenetic biosensors for multi-dimensional and super-resolved kinase activity imaging. bioRxiv : the preprint server for biology (2024)
Lingyan Shi, Yajuan Li, Shuang Wu, Lingyan Shi
Super-Resolution Stimulated Raman Scattering Microscopy with Graphical User Interface-Supported A-PoD. Current protocols 4 (1) (2024)
Lingyan Shi, Yajuan Li, Shuang Wu, Lingyan Shi
Super-Resolution Stimulated Raman Scattering Microscopy with Graphical User Interface-Supported A-PoD. Current protocols 4 (1) (2024)
Lingyan Shi, Yajuan Li, Shuang Wu, Lingyan Shi
Super-Resolution Stimulated Raman Scattering Microscopy with Graphical User Interface-Supported A-PoD. Current protocols 4 (1) (2024)
Michelle S Frei, Samantha A Sanchez, Longwei Liu, Falk Schneider, Zichen Wang, Hiroyuki Hakozaki, Yajuan Li, Anne C Lyons, Theresa V Rohm, Jerrold M Olefsky, Lingyan Shi, Johannes Schöneberg, Scott E Fraser, Sohum Mehta, Yingxiao Wang, Jin Zhang
Far-red chemigenetic biosensors for multi-dimensional and super-resolved kinase activity imaging. bioRxiv : the preprint server for biology (2024)
Hongje Jang, Yajuan Li, Anthony A Fung, Pegah Bagheri, Khang Hoang, Dorota Skowronska-Krawczyk, Xiaoping Chen, Jane Y Wu, Bogdan Bintu, Lingyan Shi
Super-resolution SRS microscopy with A-PoD. Nature methods 20 (3) (2023)
Hongje Jang, Yajuan Li, Anthony A Fung, Pegah Bagheri, Khang Hoang, Dorota Skowronska-Krawczyk, Xiaoping Chen, Jane Y Wu, Bogdan Bintu, Lingyan Shi
Super-resolution SRS microscopy with A-PoD. Nature methods (2023)
Qiantao Song, Yi Li, Zhicheng Jin, Hai Liu, Matthew N Creyer, Wonjun Yim, Yanping Huang, Xiaobing Hu, Tengyu He, Yajuan Li, Shana O Kelley, Lingyan Shi, Jiajing Zhou, Jesse V Jokerst
Self-Assembled Homopolymeric Spherulites from Small Molecules in Solution. Journal of the American Chemical Society (2023)
Yajuan Li, Phyllis Chang, Shriya Sankaran, Hongje Jang, Yuhang Nie, Audrey Zeng, Sahran Hussain, Jane Y Wu, Xu Chen, Lingyan Shi
Bioorthogonal Stimulated Raman Scattering Imaging Uncovers Lipid Metabolic Dynamics in Drosophila Brain During Aging. GEN biotechnology 2 (3) (2023)
Zhi Li, Chloe Nguyen, Hongje Jang, David Hoang, SoeSu Min, Ellen Ackerstaff, Jason A Koutcher, Lingyan Shi
Multimodal imaging of metabolic activities for distinguishing subtypes of breast cancer. Biomedical optics express 14 (11) (2023)
Wonjun Yim, Maurice Retout, Amanda A Chen, Chuxuan Ling, Lubna Amer, Zhicheng Jin, Yu-Ci Chang, Saul Chavez, Karen Barrios, Benjamin Lam, Zhi Li, Jiajing Zhou, Lingyan Shi, Tod A Pascal, Jesse V Jokerst
Correction to "Goldilocks Energy Minimum: Peptide-Based Reversible Aggregation and Biosensing". ACS applied materials & interfaces (2023)
Hongje Jang, Yajuan Li, Anthony A Fung, Pegah Bagheri, Khang Hoang, Dorota Skowronska-Krawczyk, Xiaoping Chen, Jane Y Wu, Bogdan Bintu, Lingyan Shi
Super-resolution SRS microscopy with A-PoD. Nature methods 20 (3) (2023)
Yajuan Li, Phyllis Chang, Shriya Sankaran, Hongje Jang, Yuhang Nie, Audrey Zeng, Sahran Hussain, Jane Y Wu, Xu Chen, Lingyan Shi
Bioorthogonal Stimulated Raman Scattering Imaging Uncovers Lipid Metabolic Dynamics in Drosophila Brain During Aging. GEN biotechnology 2 (3) (2023)
Lingyan Shi, Hongje Jang
Perspectives on SRS Imaging of Nanoparticles. Accounts of materials research 4 (9) (2023)
Hongje Jang, Yajuan Li, Anthony A Fung, Pegah Bagheri, Khang Hoang, Dorota Skowronska-Krawczyk, Xiaoping Chen, Jane Y Wu, Bogdan Bintu, Lingyan Shi
Super-resolution SRS microscopy with A-PoD. Nature methods 20 (3) (2023)
Hongje Jang, Yajuan Li, Anthony A Fung, Pegah Bagheri, Khang Hoang, Dorota Skowronska-Krawczyk, Xiaoping Chen, Jane Y Wu, Bogdan Bintu, Lingyan Shi
Super-resolution SRS microscopy with A-PoD. Nature methods 20 (3) (2023)
Wonjun Yim, Maurice Retout, Amanda A Chen, Chuxuan Ling, Lubna Amer, Zhicheng Jin, Yu-Ci Chang, Saul Chavez, Karen Barrios, Benjamin Lam, Zhi Li, Jiajing Zhou, Lingyan Shi, Tod A Pascal, Jesse V Jokerst
Goldilocks Energy Minimum: Peptide-Based Reversible Aggregation and Biosensing. ACS applied materials & interfaces (2023)
E J Galvez, B Sharma, F K Williams, C-J You, B Khajavi, J Castrillon, Lingyan Shi, Sandra Mamani, Laura A Sordillo, L Zhang, R R Alfano
Decoherence of photon entanglement by transmission through brain tissue with Alzheimer's disease. Biomedical optics express 13 (12) (2022)
Rishi R Agrawal, Delfina Larrea, Yimeng Xu, Lingyan Shi, Hylde Zirpoli, Leslie G Cummins, Valentina Emmanuele, Donghui Song, Taekyung D Yun, Frank P Macaluso, Wei Min, Steven G Kernie, Richard J Deckelbaum, Estela Area-Gomez
Alzheimer's-Associated Upregulation of Mitochondria-Associated ER Membranes After Traumatic Brain Injury. Cellular and molecular neurobiology (2022)
Zunming Zhang, Rui Tang, Xinyu Chen, Lauren Waller, Alston Kau, Anthony A Fung, Bien Gutierrez, Cheolhong An, Sung Hwan Cho, Lingyan Shi, Yu-Hwa Lo
A high-throughput technique to map cell images to cell positions using a 3D imaging flow cytometer. Proceedings of the National Academy of Sciences of the United States of America 119 (8) (2022)
Yajuan Li, Wenxu Zhang, Anthony A Fung, Lingyan Shi
DO-SRS imaging of diet regulated metabolic activities in Drosophila during aging processes. Aging cell 21 (4) (2022)
E J Galvez, B Sharma, F K Williams, C-J You, B Khajavi, J Castrillon, Lingyan Shi, Sandra Mamani, Laura A Sordillo, L Zhang, R R Alfano
Decoherence of photon entanglement by transmission through brain tissue with Alzheimer's disease. Biomedical optics express 13 (12) (2022)
Yajuan Li, Wenxu Zhang, Anthony A Fung, Lingyan Shi
DO-SRS imaging of metabolic dynamics in aging Drosophila. The Analyst 146 (24) (2021)
Daphne Chang, Quetanya Brown, Grace Tsui, Ye He, Jia Liu, Lingyan Shi, Adrián Rodríguez-Contreras
Distinct Cellular Profiles of Hif1a and Vegf mRNA Localization in Microglia, Astrocytes and Neurons during a Period of Vascular Maturation in the Auditory Brainstem of Neonate Rats. Brain sciences 11 (7) (2021)
Lixue Shi, Mian Wei, Yupeng Miao, Naixin Qian, Lingyan Shi, Ruth A Singer, Richard K P Benninger, Wei Min
Highly-multiplexed volumetric mapping with Raman dye imaging and tissue clearing. Nature biotechnology (2021)
Ethan Bendau, Jason Smith, Lin Zhang, Ellen Ackerstaff, Natalia Kruchevsky, Binlin Wu, Jason A Koutcher, Robert Alfano, Lingyan Shi
Distinguishing metastatic triple-negative breast cancer from nonmetastatic breast cancer using second harmonic generation imaging and resonance Raman spectroscopy. Journal of biophotonics 13 (7) (2020)
Anthony A Fung, Lingyan Shi
Mammalian cell and tissue imaging using Raman and coherent Raman microscopy. Wiley interdisciplinary reviews. Systems biology and medicine 12 (6) (2020)
Lixue Shi, Xinwen Liu, Lingyan Shi, H Ted Stinson, Jeremy Rowlette, Lisa J Kahl, Christopher R Evans, Chaogu Zheng, Lars E P Dietrich, Wei Min
Mid-infrared metabolic imaging with vibrational probes. Nature methods 17 (8) (2020)
Mian Wei, Lingyan Shi, Yihui Shen, Zhilun Zhao, Asja Guzman, Laura J Kaufman, Lu Wei, Wei Min
Volumetric chemical imaging by clearing-enhanced stimulated Raman scattering microscopy. Proceedings of the National Academy of Sciences of the United States of America 116 (14) (2019)
Luyuan Zhang, Lingyan Shi, Yihui Shen, Yupeng Miao, Mian Wei, Naixin Qian, Yinong Liu, Wei Min
Spectral tracing of deuterium for imaging glucose metabolism. Nature biomedical engineering 3 (5) (2019)
Lingyan Shi, Chaogu Zheng, Yihui Shen, Zhixing Chen, Edilson S Silveira, Luyuan Zhang, Mian Wei, Chang Liu, Carmen de Sena-Tomas, Kimara Targoff, Wei Min
Optical imaging of metabolic dynamics in animals. Nature communications 9 (1) (2018)

Lingyan Shi.css-eqlu8i{font-size:small;padding-left:4px;} (Hongje Jang, L Shi)

Publication Activity (10 Years)

Top Topics

Top Venues

Lingyan Shi (Hongje Jang, L Shi)