Mark Ziemann

Scopus Author ID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 14

Top Venues

Protoplasma

Epigenetics

PLoS computational biology

Epilepsia

Deakin University

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Deakin University Jun 04 2018

Australia

Lecturer :: School of Life and Environmental Science

Publications

Aayushree Kharel, James E Rookes, Mark Ziemann, David J Cahill
Viable protoplast isolation, organelle visualization and transformation of the globally distributed plant pathogen Phytophthora cinnamomi. Protoplasma 261 (5) (2024)
Aayushree Kharel, James E Rookes, Mark Ziemann, David J Cahill
Viable protoplast isolation, organelle visualization and transformation of the globally distributed plant pathogen Phytophthora cinnamomi. Protoplasma (2024)
Mark Ziemann, Mandhri Abeysooriya, Anusuiya Bora, Séverine Lamon, Mary Sravya Kasu, Mitchell W Norris, Yen Ting Wong, Jeffrey M Craig
Direction-aware functional class scoring enrichment analysis of infinium DNA methylation data. Epigenetics 19 (1) (2024)
Mark Ziemann, Mandhri Abeysooriya, Anusuiya Bora, Séverine Lamon, Mary Sravya Kasu, Mitchell W Norris, Yen Ting Wong, Jeffrey M Craig
Direction-aware functional class scoring enrichment analysis of infinium DNA methylation data. Epigenetics 19 (1) (2024)
Aayushree Kharel, James E Rookes, Mark Ziemann, David J Cahill
Viable protoplast isolation, organelle visualization and transformation of the globally distributed plant pathogen Phytophthora cinnamomi. Protoplasma 261 (5) (2024)
Mark Ziemann, Mandhri Abeysooriya, Anusuiya Bora, Séverine Lamon, Mary Sravya Kasu, Mitchell W Norris, Yen Ting Wong, Jeffrey M Craig
Direction-aware functional class scoring enrichment analysis of infinium DNA methylation data. Epigenetics 19 (1) (2024)
Aayushree Kharel, James E Rookes, Mark Ziemann, David J Cahill
Viable protoplast isolation, organelle visualization and transformation of the globally distributed plant pathogen Phytophthora cinnamomi. Protoplasma 261 (5) (2024)
Kaumadi Wijesooriya, Sameer A Jadaan, Kaushalya L Perera, Tanuveer Kaur, Mark Ziemann
Urgent need for consistent standards in functional enrichment analysis. PLoS computational biology 18 (3) (2022)
Mandhri Abeysooriya, Megan Soria, Mary Sravya Kasu, Mark Ziemann
Gene name errors: Lessons not learned. PLoS computational biology 17 (7) (2021)
Matthew Snelson, Sih Min Tan, Rachel E Clarke, Cassandra de Pasquale, Vicki Thallas-Bonke, Tuong-Vi Nguyen, Sally A Penfold, Brooke E Harcourt, Karly C Sourris, Runa S J Lindblom, Mark Ziemann, David Steer, Assam El-Osta, Michael Jonathan Davies, Leigh Donnellan, Permal Deo, Nicole J Kellow, Mark E Cooper, Trent M Woodruff, Charles R Mackay, Josephine M Forbes, Melinda T Coughlan
Processed foods drive intestinal barrier permeability and microvascular diseases. Science advances 7 (14) (2021)
Antony Kaspi, Mark Ziemann
mitch: multi-contrast pathway enrichment for multi-omics and single-cell profiling data. BMC genomics 21 (1) (2020)
M Isabel G Lopez Sanchez, Mark Ziemann, Annabell Bachem, Rahul Makam, Jonathan G Crowston, Carl A Pinkert, Matthew McKenzie, Sammy Bedoui, Ian A Trounce
Nuclear response to divergent mitochondrial DNA genotypes modulates the interferon immune response. PloS one 15 (10) (2020)
Katja Kobow, Mark Ziemann, Harikrishnan Kaipananickal, Ishant Khurana, Angelika Mühlebner, Martha Feucht, Johannes A Hainfellner, Thomas Czech, Eleonora Aronica, Tom Pieper, Hans Holthausen, Manfred Kudernatsch, Hajo M Hamer, Burkhard S Kasper, Karl Rössler, Valerio Conti, Renzo Guerrini, Roland Coras, Ingmar Blümcke, Assam El-Osta, Antony Kaspi
Genomic DNA methylation distinguishes subtypes of human focal cortical dysplasia. Epilepsia 60 (6) (2019)
Mark Ziemann, Antony Kaspi, Assam El-Osta
Evaluation of microRNA alignment techniques. RNA (New York, N.Y.) 22 (8) (2016)

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Publication Activity (10 Years)

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Mark Ziemann