Masatake Sugita

ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 12

Top Venues

Journal of chemical information and modeling

Journal of computational chemistry

The journal of physical chemistry. B

The Journal of chemical physics

Tokyo Institute of Technology

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Tokyo Institute of Technology Jan 01 2020

Japan

Postdoctral Researcher :: Department of Computer Science

Ritsumeikan University Apr 01 2015

Japan

Assistant professor :: Bioinformatics

Publications

Masatake Sugita, Fumio Hirata
Realization of the structural fluctuation of biomolecules in solution: Generalized Langevin mode analysis. Journal of computational chemistry 44 (10) (2023)
Jianan Li, Keisuke Yanagisawa, Masatake Sugita, Takuya Fujie, Masahito Ohue, Yutaka Akiyama
CycPeptMPDB: A Comprehensive Database of Membrane Permeability of Cyclic Peptides. Journal of chemical information and modeling (2023)
Masatake Sugita, Fumio Hirata
Realization of the structural fluctuation of biomolecules in solution: Generalized Langevin mode analysis. Journal of computational chemistry (2023)
Masatake Sugita, Fumio Hirata
Realization of the structural fluctuation of biomolecules in solution: Generalized Langevin mode analysis. Journal of computational chemistry 44 (10) (2023)
Masatake Sugita, Takuya Fujie, Keisuke Yanagisawa, Masahito Ohue, Yutaka Akiyama
Lipid Composition Is Critical for Accurate Membrane Permeability Prediction of Cyclic Peptides by Molecular Dynamics Simulations. Journal of chemical information and modeling 62 (18) (2022)
Masatake Sugita, Satoshi Sugiyama, Takuya Fujie, Yasushi Yoshikawa, Keisuke Yanagisawa, Masahito Ohue, Yutaka Akiyama
Large-Scale Membrane Permeability Prediction of Cyclic Peptides Crossing a Lipid Bilayer Based on Enhanced Sampling Molecular Dynamics Simulations. Journal of chemical information and modeling 61 (7) (2021)
Masatake Sugita, Izumi Kuwano, Taishi Higashi, Keiichi Motoyama, Hidetoshi Arima, Fumio Hirata
Computational Screening of a Functional Cyclodextrin Derivative for Suppressing a Side Effect of Doxorubicin. The journal of physical chemistry. B 125 (9) (2021)
Masatake Sugita, Itaru Onishi, Masayuki Irisa, Norio Yoshida, Fumio Hirata
Molecular Recognition and Self-Organization in Life Phenomena Studied by a Statistical Mechanics of Molecular Liquids, the RISM/3D-RISM Theory. Molecules (Basel, Switzerland) 26 (2) (2021)
Masatake Sugita, Masataka Hamano, Kota Kasahara, Takeshi Kikuchi, Fumio Hirata
New Protocol for Predicting the Ligand-Binding Site and Mode Based on the 3D-RISM/KH Theory. Journal of chemical theory and computation 16 (4) (2020)
Yuji Hayashino, Masatake Sugita, Hidetoshi Arima, Tetsumi Irie, Takeshi Kikuchi, Fumio Hirata
Predicting the Binding Mode of 2-Hydroxypropyl-β-cyclodextrin to Cholesterol by Means of the MD Simulation and the 3D-RISM-KH Theory. The journal of physical chemistry. B 122 (21) (2018)
Fumio Hirata, Masatake Sugita, Masasuke Yoshida, Kazuyuki Akasaka
Perspective: Structural fluctuation of protein and Anfinsen's thermodynamic hypothesis. The Journal of chemical physics 148 (2) (2018)
Takeshi Hasegawa, Masatake Sugita, Takeshi Kikuchi, Fumio Hirata
A Systematic Analysis of the Binding Affinity between the Pim-1 Kinase and Its Inhibitors Based on the MM/3D-RISM/KH Method. Journal of chemical information and modeling 57 (11) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Masatake Sugita