Masahito Ohue

ResearcherID Researcher Name Resolver ID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 20

Top Venues

Communications chemistry

Journal of chemical information and modeling

International journal of molecular sciences

Biomedicines

Tokyo Institute of Technology

Tokyo Institute of Technology (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Tokyo Institute of Technology Apr 01 2015

Japan

Assistant Professor :: Department of Computer Science

Japan Society for the Promotion of Science Apr 01 2014 - Mar 31 2015

Japan

Education History

Tokyo Institute of Technology Apr 01 2011 - Mar 26 2014

Japan

PHD :: Department of Computer Science

Publications

Apakorn Kengkanna, Masahito Ohue
Enhancing property and activity prediction and interpretation using multiple molecular graph representations with MMGX. Communications chemistry 7 (1) (2024)
Apakorn Kengkanna, Masahito Ohue
Enhancing property and activity prediction and interpretation using multiple molecular graph representations with MMGX. Communications chemistry 7 (1) (2024)
Apakorn Kengkanna, Masahito Ohue
Enhancing property and activity prediction and interpretation using multiple molecular graph representations with MMGX. Communications chemistry 7 (1) (2024)
Jianan Li, Keisuke Yanagisawa, Masatake Sugita, Takuya Fujie, Masahito Ohue, Yutaka Akiyama
CycPeptMPDB: A Comprehensive Database of Membrane Permeability of Cyclic Peptides. Journal of chemical information and modeling (2023)
Takatsugu Kosugi, Masahito Ohue
Design of Cyclic Peptides Targeting Protein-Protein Interactions Using AlphaFold. International journal of molecular sciences 24 (17) (2023)
Masahito Ohue, Yuki Kojima, Takatsugu Kosugi
Generating Potential Protein-Protein Interaction Inhibitor Molecules Based on Physicochemical Properties. Molecules (Basel, Switzerland) 28 (15) (2023)
Toshiki Ochiai, Tensei Inukai, Manato Akiyama, Kairi Furui, Masahito Ohue, Nobuaki Matsumori, Shinsuke Inuki, Motonari Uesugi, Toshiaki Sunazuka, Kazuya Kikuchi, Hideaki Kakeya, Yasubumi Sakakibara
Variational autoencoder-based chemical latent space for large molecular structures with 3D complexity. Communications chemistry 6 (1) (2023)
Masatake Sugita, Takuya Fujie, Keisuke Yanagisawa, Masahito Ohue, Yutaka Akiyama
Lipid Composition Is Critical for Accurate Membrane Permeability Prediction of Cyclic Peptides by Molecular Dynamics Simulations. Journal of chemical information and modeling 62 (18) (2022)
Keisuke Yanagisawa, Rikuto Kubota, Yasushi Yoshikawa, Masahito Ohue, Yutaka Akiyama
Effective Protein-Ligand Docking Strategy via Fragment Reuse and a Proof-of-Concept Implementation. ACS omega 7 (34) (2022)
Takatsugu Kosugi, Masahito Ohue
Solubility-Aware Protein Binding Peptide Design Using AlphaFold. Biomedicines 10 (7) (2022)
Masatake Sugita, Satoshi Sugiyama, Takuya Fujie, Yasushi Yoshikawa, Keisuke Yanagisawa, Masahito Ohue, Yutaka Akiyama
Large-Scale Membrane Permeability Prediction of Cyclic Peptides Crossing a Lipid Bilayer Based on Enhanced Sampling Molecular Dynamics Simulations. Journal of chemical information and modeling 61 (7) (2021)
Jianan Li, Keisuke Yanagisawa, Yasushi Yoshikawa, Masahito Ohue, Yutaka Akiyama
Plasma protein binding prediction focusing on residue-level features and circularity of cyclic peptides by deep learning. Bioinformatics (Oxford, England) (2021)
Takatsugu Kosugi, Masahito Ohue
Quantitative Estimate Index for Early-Stage Screening of Compounds Targeting Protein-Protein Interactions. International journal of molecular sciences 22 (20) (2021)
Kazuki Izawa, Kazuko Okamoto-Shibayama, Daichi Kita, Sachiyo Tomita, Atsushi Saito, Takashi Ishida, Masahito Ohue, Yutaka Akiyama, Kazuyuki Ishihara
Taxonomic and Gene Category Analyses of Subgingival Plaques from a Group of Japanese Individuals with and without Periodontitis. International journal of molecular sciences 22 (10) (2021)
Kazuki Takabatake, Kazuki Izawa, Motohiro Akikawa, Keisuke Yanagisawa, Masahito Ohue, Yutaka Akiyama
Improved Large-Scale Homology Search by Two-Step Seed Search Using Multiple Reduced Amino Acid Alphabets. Genes 12 (9) (2021)
Sho Ito, Akinobu Senoo, Satoru Nagatoishi, Masahito Ohue, Masaki Yamamoto, Kouhei Tsumoto, Naoki Wakui
Structural Basis for the Binding Mechanism of Human Serum Albumin Complexed with Cyclic Peptide Dalbavancin. Journal of medicinal chemistry 63 (22) (2020)
Shuntaro Chiba, Masahito Ohue, Anastasiia Gryniukova, Petro Borysko, Sergey Zozulya, Nobuaki Yasuo, Ryunosuke Yoshino, Kazuyoshi Ikeda, Woong-Hee Shin, Daisuke Kihara, Mitsuo Iwadate, Hideaki Umeyama, Takaaki Ichikawa, Reiji Teramoto, Kun-Yi Hsin, Vipul Gupta, Hiroaki Kitano, Mika Sakamoto, Akiko Higuchi, Nobuaki Miura, Kei Yura, Masahiro Mochizuki, Chandrasekaran Ramakrishnan, A Mary Thangakani, D Velmurugan, M Michael Gromiha, Itsuo Nakane, Nanako Uchida, Hayase Hakariya, Modong Tan, Hironori K Nakamura, Shogo D Suzuki, Tomoki Ito, Masahiro Kawatani, Kentaroh Kudoh, Sakurako Takashina, Kazuki Z Yamamoto, Yoshitaka Moriwaki, Keita Oda, Daisuke Kobayashi, Tatsuya Okuno, Shintaro Minami, George Chikenji, Philip Prathipati, Chioko Nagao, Attayeb Mohsen, Mari Ito, Kenji Mizuguchi, Teruki Honma, Takashi Ishida, Takatsugu Hirokawa, Yutaka Akiyama, Masakazu Sekijima
A prospective compound screening contest identified broader inhibitors for Sirtuin 1. Scientific reports 9 (1) (2019)
Koki Yamamoto, Yasushi Yoshikawa, Masahito Ohue, Shinsuke Inuki, Hiroaki Ohno, Shinya Oishi
Synthesis of Triazolo- and Oxadiazolopiperazines by Gold(I)-Catalyzed Domino Cyclization: Application to the Design of a Mitogen Activated Protein (MAP) Kinase Inhibitor. Organic letters 21 (2) (2018)
Daisuke Kami, Tomoya Kitani, Akihiro Nakamura, Naoki Wakui, Rena Mizutani, Masahito Ohue, Fuyuki Kametani, Nobuyoshi Akimitsu, Satoshi Gojo
The DEAD-box RNA-binding protein DDX6 regulates parental RNA decay for cellular reprogramming to pluripotency. PloS one 13 (10) (2018)
Masahiro Mochizuki, Shogo D Suzuki, Keisuke Yanagisawa, Masahito Ohue, Yutaka Akiyama
QEX: target-specific druglikeness filter enhances ligand-based virtual screening. Molecular diversity 23 (1) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Masahito Ohue