Matthias Merkenschlager

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 27

Top Venues

Communications biology

Nature communications

Nature genetics

eLife

University College London (PHD)

This page only lists publications with an associated author ORCID identifier.

Education History

University College London

United Kingdom

PHD

Publications

Ilaria Palmisano, Tong Liu, Wei Gao, Luming Zhou, Matthias Merkenschlager, Franziska Mueller, Jessica S Chadwick, Rebecca Toscano Rivalta, Guiping Kong, James W D King, Ediem Al-Jibury, Yuyang Yan, Alessandro Carlino, Bryce Collison, Eleonora De Vitis, Sree Gongala, Francesco De Virgiliis, Zheng Wang, Simone Di Giovanni
Three-dimensional chromatin mapping of sensory neurons reveals that promoter-enhancer looping is required for axonal regeneration. Proceedings of the National Academy of Sciences of the United States of America 121 (38) (2024)
Teresa Buenaventura, Hakan Bagci, Ilinca Patrascan, Joshua J Graham, Kelsey D Hipwell, Roel Oldenkamp, James W D King, Jesus Urtasun, George R Young, Daniel Mouzo, David Gomez-Cabrero, Benjamin D Rowland, Daniel Panne, Amanda G Fisher, Matthias Merkenschlager
Competition shapes the landscape of X-chromosome-linked genetic diversity. Nature genetics 56 (8) (2024)
Teresa Buenaventura, Hakan Bagci, Ilinca Patrascan, Joshua J Graham, Kelsey D Hipwell, Roel Oldenkamp, James W D King, Jesus Urtasun, George R Young, Daniel Mouzo, David Gomez-Cabrero, Benjamin D Rowland, Daniel Panne, Amanda G Fisher, Matthias Merkenschlager
Competition shapes the landscape of X-chromosome-linked genetic diversity. Nature genetics (2024)
Teresa Buenaventura, Hakan Bagci, Ilinca Patrascan, Joshua J Graham, Kelsey D Hipwell, Roel Oldenkamp, James W D King, Jesus Urtasun, George R Young, Daniel Mouzo, David Gomez-Cabrero, Benjamin D Rowland, Daniel Panne, Amanda G Fisher, Matthias Merkenschlager
Competition shapes the landscape of X-chromosome-linked genetic diversity. Nature genetics 56 (8) (2024)
Nicolas Veland, Hannah J Gleneadie, Karen E Brown, Alessandro Sardini, Joaquim Pombo, Andrew Dimond, Vanessa Burns, Karen Sarkisyan, Chris Schiering, Zoe Webster, Matthias Merkenschlager, Amanda G Fisher
Bioluminescence imaging of Cyp1a1-luciferase reporter mice demonstrates prolonged activation of the aryl hydrocarbon receptor in the lung. Communications biology 7 (1) (2024)
Teresa Buenaventura, Hakan Bagci, Ilinca Patrascan, Joshua J Graham, Kelsey D Hipwell, Roel Oldenkamp, James W D King, Jesus Urtasun, George R Young, Daniel Mouzo, David Gomez-Cabrero, Benjamin D Rowland, Daniel Panne, Amanda G Fisher, Matthias Merkenschlager
Competition shapes the landscape of X-chromosome-linked genetic diversity. Nature genetics 56 (8) (2024)
Nicolas Veland, Hannah J Gleneadie, Karen E Brown, Alessandro Sardini, Joaquim Pombo, Andrew Dimond, Vanessa Burns, Karen Sarkisyan, Chris Schiering, Zoe Webster, Matthias Merkenschlager, Amanda G Fisher
Bioluminescence imaging of Cyp1a1-luciferase reporter mice demonstrates prolonged activation of the aryl hydrocarbon receptor in the lung. Communications biology 7 (1) (2024)
Nicolas Veland, Hannah J Gleneadie, Karen E Brown, Alessandro Sardini, Joaquim Pombo, Andrew Dimond, Vanessa Burns, Karen Sarkisyan, Chris Schiering, Zoe Webster, Matthias Merkenschlager, Amanda G Fisher
Bioluminescence imaging of Cyp1a1-luciferase reporter mice demonstrates prolonged activation of the aryl hydrocarbon receptor in the lung. Communications biology 7 (1) (2024)
Teresa Buenaventura, Hakan Bagci, Ilinca Patrascan, Joshua J Graham, Kelsey D Hipwell, Roel Oldenkamp, James W D King, Jesus Urtasun, George R Young, Daniel Mouzo, David Gomez-Cabrero, Benjamin D Rowland, Daniel Panne, Amanda G Fisher, Matthias Merkenschlager
Competition shapes the landscape of X-chromosome-linked genetic diversity. Nature genetics (2024)
Nicolas Veland, Hannah J Gleneadie, Karen E Brown, Alessandro Sardini, Joaquim Pombo, Andrew Dimond, Vanessa Burns, Karen Sarkisyan, Chris Schiering, Zoe Webster, Matthias Merkenschlager, Amanda G Fisher
Bioluminescence imaging of Cyp1a1-luciferase reporter mice demonstrates prolonged activation of the aryl hydrocarbon receptor in the lung. Communications biology 7 (1) (2024)
Hannah J Gleneadie, Beatriz Fernandez-Ruiz, Alessandro Sardini, Mathew Van de Pette, Andrew Dimond, Rabinder K Prinjha, James McGinty, Paul M W French, Hakan Bagci, Matthias Merkenschlager, Amanda G Fisher
Endogenous bioluminescent reporters reveal a sustained increase in utrophin gene expression upon EZH2 and ERK1/2 inhibition. Communications biology 6 (1) (2023)
Amanda G Fisher, Matthias Merkenschlager
Avrion Mitchison (1928-2022). Nature immunology (2023)
Ediem Al-Jibury, James W D King, Ya Guo, Boris Lenhard, Amanda G Fisher, Matthias Merkenschlager, Daniel Ruckert
A deep learning method for replicate-based analysis of chromosome conformation contacts using Siamese neural networks. Nature communications 14 (1) (2023)
Hannah J Gleneadie, Beatriz Fernandez-Ruiz, Alessandro Sardini, Mathew Van de Pette, Andrew Dimond, Rabinder K Prinjha, James McGinty, Paul M W French, Hakan Bagci, Matthias Merkenschlager, Amanda G Fisher
Endogenous bioluminescent reporters reveal a sustained increase in utrophin gene expression upon EZH2 and ERK1/2 inhibition. Communications biology 6 (1) (2023)
Hannah J Gleneadie, Beatriz Fernandez-Ruiz, Alessandro Sardini, Mathew Van de Pette, Andrew Dimond, Rabinder K Prinjha, James McGinty, Paul M W French, Hakan Bagci, Matthias Merkenschlager, Amanda G Fisher
Endogenous bioluminescent reporters reveal a sustained increase in utrophin gene expression upon EZH2 and ERK1/2 inhibition. Communications biology 6 (1) (2023)
Irene Robles-Rebollo, Sergi Cuartero, Adria Canellas-Socias, Sarah Wells, Mohammad M Karimi, Elisabetta Mereu, Alexandra G Chivu, Holger Heyn, Chad Whilding, Dirk Dormann, Samuel Marguerat, Inmaculada Rioja, Rab K Prinjha, Michael P H Stumpf, Amanda G Fisher, Matthias Merkenschlager
Cohesin couples transcriptional bursting probabilities of inducible enhancers and promoters. Nature communications 13 (1) (2022)
Mathew Van de Pette, Andrew Dimond, António M Galvão, Steven J Millership, Wilson To, Chiara Prodani, Gráinne McNamara, Ludovica Bruno, Alessandro Sardini, Zoe Webster, James McGinty, Paul M W French, Anthony G Uren, Juan E Castillo-Fernandez, William Watkinson, Anne C Ferguson-Smith, Matthias Merkenschlager, Rosalind M John, Gavin Kelsey, Amanda G Fisher
Epigenetic changes induced by in utero dietary challenge result in phenotypic variability in successive generations of mice. Nature communications 13 (1) (2022)
Lesly Calderón, Felix Daniel Weiss, Jonathan A Beagan, Marta S Oliveira, Radina Georgieva, Yi-Fang Wang, Thomas S Carroll, Gopuraja Dharmalingam, Wanfeng Gong, Kyoko Tossell, Vincenzo de Paola, Chad Whilding, Mark A Ungless, Amanda G Fisher, Jennifer E Phillips-Cremins, Matthias Merkenschlager
Cohesin-dependence of neuronal gene expression relates to chromatin loop length. eLife 11 (2022)
Mohammad M Karimi, Ya Guo, Xiaokai Cui, Husayn Ahmed Pallikonda, Veronika Horkova, Yi-Fang Wang, Sara Ruiz Gil, Gustavo Rodriguez-Esteban, Irene Robles-Rebollo, Ludovica Bruno, Radina Georgieva, Bhavik Patel, James Elliott, Marian H Dore, Danielle Dauphars, Michael S Krangel, Boris Lenhard, Holger Heyn, Amanda G Fisher, Ondrej Stepanek, Matthias Merkenschlager
The order and logic of CD4 versus CD8 lineage choice and differentiation in mouse thymus. Nature communications 12 (1) (2021)
Felix Daniel Weiss, Lesly Calderon, Yi-Fang Wang, Radina Georgieva, Ya Guo, Nevena Cvetesic, Maninder Kaur, Gopuraja Dharmalingam, Ian D Krantz, Boris Lenhard, Amanda G Fisher, Matthias Merkenschlager
Neuronal genes deregulated in Cornelia de Lange Syndrome respond to removal and re-expression of cohesin. Nature communications 12 (1) (2021)
Dounia Djeghloul, Bhavik Patel, Holger B Kramer, Andrew Dimond, Chad Whilding, Karen Brown, Anne-Céline Kohler, Amelie Feytout, Nicolas Veland, James Elliott, Tanmay A M Bharat, Abul K Tarafder, Jan Löwe, Bee Ling Ng, Ya Guo, Jacky Guy, Miles K Huseyin, Robert J Klose, Matthias Merkenschlager, Amanda G Fisher
Identifying proteins bound to native mitotic ESC chromosomes reveals chromatin repressors are important for compaction. Nature communications 11 (1) (2020)
Isabel Ferreirós-Vidal, Thomas Carroll, Tianyi Zhang, Vincenzo Lagani, Ricardo N Ramirez, Elizabeth Ing-Simmons, Alicia G Gómez-Valadés, Lee Cooper, Ziwei Liang, Georgios Papoutsoglou, Gopuraja Dharmalingam, Ya Guo, Sonia Tarazona, Sunjay J Fernandes, Peri Noori, Gilad Silberberg, Amanda G Fisher, Ioannis Tsamardinos, Ali Mortazavi, Boris Lenhard, Ana Conesa, Jesper Tegner, Matthias Merkenschlager, David Gomez-Cabrero
Feedforward regulation of Myc coordinates lineage-specific with housekeeping gene expression during B cell progenitor cell differentiation. PLoS biology 17 (4) (2019)
Ludovica Bruno, Vijendra Ramlall, Romain A Studer, Stephan Sauer, David Bradley, Gopuraja Dharmalingam, Thomas Carroll, Mohamed Ghoneim, Michaël Chopin, Stephen L Nutt, Sarah Elderkin, David S Rueda, Amanda G Fisher, Trevor Siggers, Pedro Beltrao, Matthias Merkenschlager
Selective deployment of transcription factor paralogs with submaximal strength facilitates gene regulation in the immune system. Nature immunology 20 (10) (2019)
Maria Rojec, Antoine Hocher, Kathryn M Stevens, Matthias Merkenschlager, Tobias Warnecke
Chromatinization of Escherichia coli with archaeal histones. eLife 8 (2019)
Camden Jansen, Ricardo N Ramirez, Nicole C El-Ali, David Gomez-Cabrero, Jesper Tegner, Matthias Merkenschlager, Ana Conesa, Ali Mortazavi
Building gene regulatory networks from scATAC-seq and scRNA-seq using Linked Self Organizing Maps. PLoS computational biology 15 (11) (2019)
Sergi Cuartero, Felix D Weiss, Gopuraja Dharmalingam, Ya Guo, Elizabeth Ing-Simmons, Silvia Masella, Irene Robles-Rebollo, Xiaolin Xiao, Yi-Fang Wang, Iros Barozzi, Dounia Djeghloul, Mariane T Amano, Henri Niskanen, Enrico Petretto, Robin D Dowell, Kikuë Tachibana, Minna U Kaikkonen, Kim A Nasmyth, Boris Lenhard, Gioacchino Natoli, Amanda G Fisher, Matthias Merkenschlager
Control of inducible gene expression links cohesin to hematopoietic progenitor self-renewal and differentiation. Nature immunology 19 (9) (2018)
Ziwei Liang, Karen E Brown, Thomas Carroll, Benjamin J M Taylor, Isabel Ferreirós Vidal, Brian Hendrich, David Rueda, Amanda G Fisher, Matthias Merkenschlager
A high-resolution map of transcriptional repression. eLife 6 (2017)

Matthias Merkenschlager.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Matthias Merkenschlager