Naoki Irie

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 24

Top Venues

Nature ecology & evolution

Development, growth & differentiation

Journal of experimental zoology. Part B, Molecular and developmental evolution

Evolution & development

University of Tokyo

Kyoto University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Tokyo

Japan

Associate Professor :: Department of Biological Sciences

Education History

Kyoto University

Japan

PHD :: Graduate School of Medicine

Publications

Yui Uchida, Masato Tsutsumi, Shunsuke Ichii, Naoki Irie, Chikara Furusawa
Deciphering the origin of developmental stability: The role of intracellular expression variability in evolutionary conservation. Evolution & development 26 (2) (2024)
Daqi Yu, Yandong Ren, Masahiro Uesaka, Alan J S Beavan, Matthieu Muffato, Jieyu Shen, Yongxin Li, Iori Sato, Wenting Wan, James W Clark, Joseph N Keating, Emily M Carlisle, Richard P Dearden, Sam Giles, Emma Randle, Robert S Sansom, Roberto Feuda, James F Fleming, Fumiaki Sugahara, Carla Cummins, Mateus Patricio, Wasiu Akanni, Salvatore D'Aniello, Cristiano Bertolucci, Naoki Irie, Cantas Alev, Guojun Sheng, Alex de Mendoza, Ignacio Maeso, Manuel Irimia, Bastian Fromm, Kevin J Peterson, Sabyasachi Das, Masayuki Hirano, Jonathan P Rast, Max D Cooper, Jordi Paps, Davide Pisani, Shigeru Kuratani, Fergal J Martin, Wen Wang, Phillip C J Donoghue, Yong Edward Zhang, Juan Pascual-Anaya
Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences. Nature ecology & evolution (2024)
Daqi Yu, Yandong Ren, Masahiro Uesaka, Alan J S Beavan, Matthieu Muffato, Jieyu Shen, Yongxin Li, Iori Sato, Wenting Wan, James W Clark, Joseph N Keating, Emily M Carlisle, Richard P Dearden, Sam Giles, Emma Randle, Robert S Sansom, Roberto Feuda, James F Fleming, Fumiaki Sugahara, Carla Cummins, Mateus Patricio, Wasiu Akanni, Salvatore D'Aniello, Cristiano Bertolucci, Naoki Irie, Cantas Alev, Guojun Sheng, Alex de Mendoza, Ignacio Maeso, Manuel Irimia, Bastian Fromm, Kevin J Peterson, Sabyasachi Das, Masayuki Hirano, Jonathan P Rast, Max D Cooper, Jordi Paps, Davide Pisani, Shigeru Kuratani, Fergal J Martin, Wen Wang, Phillip C J Donoghue, Yong Edward Zhang, Juan Pascual-Anaya
Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences. Nature ecology & evolution 8 (3) (2024)
Yui Uchida, Masato Tsutsumi, Shunsuke Ichii, Naoki Irie, Chikara Furusawa
Deciphering the origin of developmental stability: The role of intracellular expression variability in evolutionary conservation. Evolution & development 26 (2) (2024)
Daqi Yu, Yandong Ren, Masahiro Uesaka, Alan J S Beavan, Matthieu Muffato, Jieyu Shen, Yongxin Li, Iori Sato, Wenting Wan, James W Clark, Joseph N Keating, Emily M Carlisle, Richard P Dearden, Sam Giles, Emma Randle, Robert S Sansom, Roberto Feuda, James F Fleming, Fumiaki Sugahara, Carla Cummins, Mateus Patricio, Wasiu Akanni, Salvatore D'Aniello, Cristiano Bertolucci, Naoki Irie, Cantas Alev, Guojun Sheng, Alex de Mendoza, Ignacio Maeso, Manuel Irimia, Bastian Fromm, Kevin J Peterson, Sabyasachi Das, Masayuki Hirano, Jonathan P Rast, Max D Cooper, Jordi Paps, Davide Pisani, Shigeru Kuratani, Fergal J Martin, Wen Wang, Phillip C J Donoghue, Yong Edward Zhang, Juan Pascual-Anaya
Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences. Nature ecology & evolution 8 (3) (2024)
Daqi Yu, Yandong Ren, Masahiro Uesaka, Alan J S Beavan, Matthieu Muffato, Jieyu Shen, Yongxin Li, Iori Sato, Wenting Wan, James W Clark, Joseph N Keating, Emily M Carlisle, Richard P Dearden, Sam Giles, Emma Randle, Robert S Sansom, Roberto Feuda, James F Fleming, Fumiaki Sugahara, Carla Cummins, Mateus Patricio, Wasiu Akanni, Salvatore D'Aniello, Cristiano Bertolucci, Naoki Irie, Cantas Alev, Guojun Sheng, Alex de Mendoza, Ignacio Maeso, Manuel Irimia, Bastian Fromm, Kevin J Peterson, Sabyasachi Das, Masayuki Hirano, Jonathan P Rast, Max D Cooper, Jordi Paps, Davide Pisani, Shigeru Kuratani, Fergal J Martin, Wen Wang, Phillip C J Donoghue, Yong Edward Zhang, Juan Pascual-Anaya
Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences. Nature ecology & evolution 8 (3) (2024)
Yui Uchida, Masato Tsutsumi, Shunsuke Ichii, Naoki Irie, Chikara Furusawa
Deciphering the origin of developmental stability: The role of intracellular expression variability in evolutionary conservation. Evolution & development (2024)
Alexandria Borges, Flore Castellan, Naoki Irie
Emergent roles of maternal microchimerism in postnatal development. Development, growth & differentiation 65 (1) (2022)
Yui Uchida, Shuji Shigenobu, Hiroyuki Takeda, Chikara Furusawa, Naoki Irie
Potential contribution of intrinsic developmental stability toward body plan conservation. BMC biology 20 (1) (2022)
Alexandria Borges, Flore Castellan, Naoki Irie
Emergent roles of maternal microchimerism in postnatal development. Development, growth & differentiation (2022)
Alexandria Borges, Flore Castellan, Naoki Irie
Emergent roles of maternal microchimerism in postnatal development. Development, growth & differentiation 65 (1) (2022)
Flore S Castellan, Naoki Irie
Postnatal depletion of maternal cells biases T lymphocytes and natural killer cells' profiles toward early activation in the spleen. Biology open 11 (11) (2022)
Jason Cheok Kuan Leong, Masahiro Uesaka, Naoki Irie
Distinguishing Evolutionary Conservation from Derivedness. Life (Basel, Switzerland) 12 (3) (2022)
Alexandria Borges, Flore Castellan, Naoki Irie
Emergent roles of maternal microchimerism in postnatal development. Development, growth & differentiation (2022)
Yongxin Li, Akihito Omori, Rachel L Flores, Sheri Satterfield, Christine Nguyen, Tatsuya Ota, Toko Tsurugaya, Tetsuro Ikuta, Kazuho Ikeo, Mani Kikuchi, Jason C K Leong, Adrian Reich, Meng Hao, Wenting Wan, Yang Dong, Yaondong Ren, Si Zhang, Tao Zeng, Masahiro Uesaka, Yui Uchida, Xue-Yan Li, Tomoko F Shibata, Takahiro Bino, Kota Ogawa, Shuji Shigenobu, Mariko Kondo, Fayou Wang, Luo-Nan Chen, Gary Wessel, Hidetoshi Saiga, R Andrew Cameron, Brian Livingston, Cynthia Bradham, Wen Wang, Naoki Irie
Author Correction: Genomic insights of body plan transitions from bilateral to pentameral symmetry in Echinoderms. Communications biology 4 (1) (2021)
Satoko Fujimoto, Kaori Yamanaka, Chiharu Tanegashima, Osamu Nishimura, Shigehiro Kuraku, Shigeru Kuratani, Naoki Irie
Measuring potential effects of the developmental burden associated with the vertebrate notochord. Journal of experimental zoology. Part B, Molecular and developmental evolution (2021)
Masahiro Uesaka, Shigeru Kuratani, Naoki Irie
The developmental hourglass model and recapitulation: An attempt to integrate the two models. Journal of experimental zoology. Part B, Molecular and developmental evolution (2021)
Kana Fujimoto, Akira Nakajima, Shohei Hori, Naoki Irie
Whole embryonic detection of maternal microchimeric cells highlights significant differences in their numbers among individuals. PloS one 16 (12) (2021)
Shigeru Kuratani, Masahiro Uesaka, Naoki Irie
How can recapitulation be reconciled with modern concepts of evolution? Journal of experimental zoology. Part B, Molecular and developmental evolution (2020)
Naoki Irie
In the spotlight-Established researcher. Journal of experimental zoology. Part B, Molecular and developmental evolution (2020)
Yongxin Li, Akihito Omori, Rachel L Flores, Sheri Satterfield, Christine Nguyen, Tatsuya Ota, Toko Tsurugaya, Tetsuro Ikuta, Kazuho Ikeo, Mani Kikuchi, Jason C K Leong, Adrian Reich, Meng Hao, Wenting Wan, Yang Dong, Yaondong Ren, Si Zhang, Tao Zeng, Masahiro Uesaka, Yui Uchida, Xue-Yan Li, Tomoko F Shibata, Takahiro Bino, Kota Ogawa, Shuji Shigenobu, Mariko Kondo, Fayou Wang, Luo-Nan Chen, Gary Wessel, Hidetoshi Saiga, R Andrew Cameron, Brian Livingston, Cynthia Bradham, Wen Wang, Naoki Irie
Genomic insights of body plan transitions from bilateral to pentameral symmetry in Echinoderms. Communications biology 3 (1) (2020)
Naoki Irie, Noriyuki Satoh, Shigeru Kuratani
The phylum Vertebrata: a case for zoological recognition. Zoological letters 4 (2018)
Kazuki Ichikawa, Shingo Tomioka, Yuta Suzuki, Ryohei Nakamura, Koichiro Doi, Jun Yoshimura, Masahiko Kumagai, Yusuke Inoue, Yui Uchida, Naoki Irie, Hiroyuki Takeda, Shinich Morishita
Centromere evolution and CpG methylation during vertebrate speciation. Nature communications 8 (1) (2017)
Haiyang Hu, Masahiro Uesaka, Song Guo, Kotaro Shimai, Tsai-Ming Lu, Fang Li, Satoko Fujimoto, Masato Ishikawa, Shiping Liu, Yohei Sasagawa, Guojie Zhang, Shigeru Kuratani, Jr-Kai Yu, Takehiro G Kusakabe, Philipp Khaitovich, Naoki Irie, null null
Constrained vertebrate evolution by pleiotropic genes. Nature ecology & evolution 1 (11) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Naoki Irie