Bastian Fromm

Scopus Author ID Loop profile ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 18

Top Topics

Trypanosoma Cruzi

Metastatic Colorectal Cancer

Top Venues

Nature ecology & evolution

RNA (New York, N.Y.)

Nucleic acids research

This page only lists publications with an associated author ORCID identifier.

Publications

Daqi Yu, Yandong Ren, Masahiro Uesaka, Alan J S Beavan, Matthieu Muffato, Jieyu Shen, Yongxin Li, Iori Sato, Wenting Wan, James W Clark, Joseph N Keating, Emily M Carlisle, Richard P Dearden, Sam Giles, Emma Randle, Robert S Sansom, Roberto Feuda, James F Fleming, Fumiaki Sugahara, Carla Cummins, Mateus Patricio, Wasiu Akanni, Salvatore D'Aniello, Cristiano Bertolucci, Naoki Irie, Cantas Alev, Guojun Sheng, Alex de Mendoza, Ignacio Maeso, Manuel Irimia, Bastian Fromm, Kevin J Peterson, Sabyasachi Das, Masayuki Hirano, Jonathan P Rast, Max D Cooper, Jordi Paps, Davide Pisani, Shigeru Kuratani, Fergal J Martin, Wen Wang, Phillip C J Donoghue, Yong Edward Zhang, Juan Pascual-Anaya
Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences. Nature ecology & evolution (2024)
Daqi Yu, Yandong Ren, Masahiro Uesaka, Alan J S Beavan, Matthieu Muffato, Jieyu Shen, Yongxin Li, Iori Sato, Wenting Wan, James W Clark, Joseph N Keating, Emily M Carlisle, Richard P Dearden, Sam Giles, Emma Randle, Robert S Sansom, Roberto Feuda, James F Fleming, Fumiaki Sugahara, Carla Cummins, Mateus Patricio, Wasiu Akanni, Salvatore D'Aniello, Cristiano Bertolucci, Naoki Irie, Cantas Alev, Guojun Sheng, Alex de Mendoza, Ignacio Maeso, Manuel Irimia, Bastian Fromm, Kevin J Peterson, Sabyasachi Das, Masayuki Hirano, Jonathan P Rast, Max D Cooper, Jordi Paps, Davide Pisani, Shigeru Kuratani, Fergal J Martin, Wen Wang, Phillip C J Donoghue, Yong Edward Zhang, Juan Pascual-Anaya
Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences. Nature ecology & evolution 8 (3) (2024)
Philipp H Schiffer, Paschalis Natsidis, Daniel J Leite, Helen E Robertson, François Lapraz, Ferdinand Marlétaz, Bastian Fromm, Liam Baudry, Fraser Simpson, Eirik Høye, Anne C Zakrzewski, Paschalia Kapli, Katharina J Hoff, Steven Mueller, Martial Marbouty, Heather Marlow, Richard R Copley, Romain Koszul, Peter Sarkies, Maximilian J Telford
Insights into early animal evolution form the genome of the xenacoelomorph worm Xenoturbella bocki . eLife 13 (2024)
Daqi Yu, Yandong Ren, Masahiro Uesaka, Alan J S Beavan, Matthieu Muffato, Jieyu Shen, Yongxin Li, Iori Sato, Wenting Wan, James W Clark, Joseph N Keating, Emily M Carlisle, Richard P Dearden, Sam Giles, Emma Randle, Robert S Sansom, Roberto Feuda, James F Fleming, Fumiaki Sugahara, Carla Cummins, Mateus Patricio, Wasiu Akanni, Salvatore D'Aniello, Cristiano Bertolucci, Naoki Irie, Cantas Alev, Guojun Sheng, Alex de Mendoza, Ignacio Maeso, Manuel Irimia, Bastian Fromm, Kevin J Peterson, Sabyasachi Das, Masayuki Hirano, Jonathan P Rast, Max D Cooper, Jordi Paps, Davide Pisani, Shigeru Kuratani, Fergal J Martin, Wen Wang, Phillip C J Donoghue, Yong Edward Zhang, Juan Pascual-Anaya
Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences. Nature ecology & evolution 8 (3) (2024)
Daqi Yu, Yandong Ren, Masahiro Uesaka, Alan J S Beavan, Matthieu Muffato, Jieyu Shen, Yongxin Li, Iori Sato, Wenting Wan, James W Clark, Joseph N Keating, Emily M Carlisle, Richard P Dearden, Sam Giles, Emma Randle, Robert S Sansom, Roberto Feuda, James F Fleming, Fumiaki Sugahara, Carla Cummins, Mateus Patricio, Wasiu Akanni, Salvatore D'Aniello, Cristiano Bertolucci, Naoki Irie, Cantas Alev, Guojun Sheng, Alex de Mendoza, Ignacio Maeso, Manuel Irimia, Bastian Fromm, Kevin J Peterson, Sabyasachi Das, Masayuki Hirano, Jonathan P Rast, Max D Cooper, Jordi Paps, Davide Pisani, Shigeru Kuratani, Fergal J Martin, Wen Wang, Phillip C J Donoghue, Yong Edward Zhang, Juan Pascual-Anaya
Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences. Nature ecology & evolution 8 (3) (2024)
Eirik Høye, Vegar Johansen Dagenborg, Annette Torgunrud, Christin Lund-Andersen, Åsmund Avdem Fretland, Susanne Lorenz, Bjørn Edwin, Eivind Hovig, Bastian Fromm, Else Marit Inderberg, Victor Greiff, Anne Hansen Ree, Norman John Carr
T cell receptor repertoire sequencing reveals chemotherapy-driven clonal expansion in colorectal liver metastases. GigaScience 12 (2023)
Emilio Marmol-Sanchez, Bastian Fromm, Nikolay Oskolkov, Zoé Pochon, Panagiotis Kalogeropoulos, Eli Eriksson, Inna Biryukova, Vaishnovi Sekar, Erik Ersmark, Bjorn Andersson, Love Dalen, Marc R Friedländer
Historical RNA expression profiles from the extinct Tasmanian tiger. Genome research (2023)
Eirik Høye, Vegar Johansen Dagenborg, Annette Torgunrud, Christin Lund-Andersen, Åsmund Avdem Fretland, Susanne Lorenz, Bjørn Edwin, Eivind Hovig, Bastian Fromm, Else Marit Inderberg, Victor Greiff, Anne Hansen Ree, Norman John Carr
T cell receptor repertoire sequencing reveals chemotherapy-driven clonal expansion in colorectal liver metastases. GigaScience 12 (2023)
Eirik Høye, Vegar Johansen Dagenborg, Annette Torgunrud, Christin Lund-Andersen, Åsmund Avdem Fretland, Susanne Lorenz, Bjørn Edwin, Eivind Hovig, Bastian Fromm, Else Marit Inderberg, Victor Greiff, Anne Hansen Ree, Norman John Carr
T cell receptor repertoire sequencing reveals chemotherapy-driven clonal expansion in colorectal liver metastases. GigaScience 12 (2023)
Grygoriy Zolotarov, Bastian Fromm, Ivano Legnini, Salah Ayoub, Gianluca Polese, Valeria Maselli, Peter J Chabot, Jakob Vinther, Ruth Styfhals, Eve Seuntjens, Anna Di Cosmo, Kevin J Peterson, Nikolaus Rajewsky
MicroRNAs are deeply linked to the emergence of the complex octopus brain. Science advances 8 (47) (2022)
Eirik Høye, Bastian Fromm, Paul H M Böttger, Diana Domanska, Annette Torgunrud, Christin Lund-Andersen, Torveig Weum Abrahamsen, Åsmund Avdem Fretland, Vegar J Dagenborg, Susanne Lorenz, Bjørn Edwin, Eivind Hovig, Kjersti Flatmark
A comprehensive framework for analysis of microRNA sequencing data in metastatic colorectal cancer. NAR cancer 4 (1) (2022)
Bastian Fromm, Xiangfu Zhong, Marcel Tarbier, Marc R Friedländer, Michael Hackenberg
The limits of human microRNA annotation have been met. RNA (New York, N.Y.) 28 (6) (2022)
Ernesto Aparicio-Puerta, Cristina Gómez-Martin, Stavros Giannoukakos, José María Medina, Chantal Scheepbouwer, Adrian Garcia-Moreno, Pedro Carmona-Saez, Bastian Fromm, Michiel Pegtel, Andreas Keller, Juan Antonio Marchal, Michael Hackenberg
sRNAbench and sRNAtoolbox 2022 update: accurate miRNA and sncRNA profiling for model and non-model organisms. Nucleic acids research (2022)
Bastian Fromm, Eirik Høye, Diana Domanska, Xiangfu Zhong, Ernesto Aparicio-Puerta, Vladimir Ovchinnikov, Sinan U Umu, Peter J Chabot, Wenjing Kang, Morteza Aslanzadeh, Marcel Tarbier, Emilio Mármol-Sánchez, Gianvito Urgese, Morten Johansen, Eivind Hovig, Michael Hackenberg, Marc R Friedländer, Kevin J Peterson
MirGeneDB 2.1: toward a complete sampling of all major animal phyla. Nucleic acids research (2021)
Bastian Fromm, Marcel Tarbier, Oliver Smith, Emilio Marmol-Sanchez, Anders Götherström, Tom P Gilbert, Marc R Friedländer
Ancient microRNA profiles of a 14,300-year-old canid samples confirm taxonomic origin and give glimpses into tissue-specific gene regulation from the Pleistocene. RNA (New York, N.Y.) (2020)
Tobias Fehlmann, Daniela Berdnik, Nicholas Schaum, Oliver Hahn, Mustafa Kahraman, Yongping Li, Nadja Grammes, Lars Geffers, Christina Backes, Rudi Balling, Fabian Kern, Rejko Krüger, Frank Lammert, Nicole Ludwig, Benjamin Meder, Bastian Fromm, Walter Maetzler, Daniela Berg, Kathrin Brockmann, Christian Deuschle, Anna-Katharina von Thaler, Gerhard W Eschweiler, Sofiya Milman, Nir Barziliai, Matthias Christian Reichert, Tony Wyss-Coray, Eckart Meese, Andreas Keller
Common diseases alter the physiological age-related blood microRNA profile. Nature communications 11 (1) (2020)
Eline P Hansen, Bastian Fromm, Sidsel D Andersen, Antonio Marcilla, Kasper L Andersen, Anne Borup, Andrew R Williams, Aaron R Jex, Robin B Gasser, Neil D Young, Ross S Hall, Allan Stensballe, Vladimir Ovchinnikov, Yan Yan, Merete Fredholm, Stig M Thamsborg, Peter Nejsum
Exploration of extracellular vesicles from Ascaris suum provides evidence of parasite-host cross talk. Journal of extracellular vesicles 8 (1) (2019)
Sinan Uğur Umu, Hilde Langseth, Cecilie Bucher-Johannessen, Bastian Fromm, Andreas Keller, Eckart Meese, Marianne Lauritzen, Magnus Leithaug, Robert Lyle, Trine B Haugen
A comprehensive profile of circulating RNAs in human serum. RNA biology 15 (2) (2017)