Nicholas Stephanopoulos (N Stephanopoulos)

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 46

Top Topics

Tissue Engineering

Circulating Tumor

Top Venues

Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Journal of chemical information and modeling

This page only lists publications with an associated author ORCID identifier.

Publications

Qinyi Lu, Yang Xu, Erik Poppleton, Kun Zhou, Petr Sulc, Nicholas Stephanopoulos, Yonggang Ke
DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes. Nano letters 24 (5) (2024)
Alexandra Novacek, Bryan Ugaz, Nicholas Stephanopoulos
Templating Peptide Chemistry with Nucleic Acids: Toward Artificial Ribosomes, Cell-Specific Therapeutics, and Novel Protein-Mimetic Architectures. Biomacromolecules (2024)
Hao Liu, Michael Matthies, John Russo, Lorenzo Rovigatti, Raghu Pradeep Narayanan, Thong Diep, Daniel McKeen, Oleg Gang, Nicholas Stephanopoulos, Francesco Sciortino, Hao Yan, Flavio Romano, Petr Sulc
Inverse design of a pyrochlore lattice of DNA origami through model-driven experiments. Science (New York, N.Y.) 384 (6697) (2024)
Qinyi Lu, Yang Xu, Erik Poppleton, Kun Zhou, Petr Sulc, Nicholas Stephanopoulos, Yonggang Ke
DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes. Nano letters 24 (5) (2024)
Teng Teng, Julio Bernal-Chanchavac, Nicholas Stephanopoulos, Carlos E Castro
Construction of Reconfigurable and Polymorphic DNA Origami Assemblies with Coiled-Coil Patches and Patterns. Advanced science (Weinheim, Baden-Wurttemberg, Germany) (2024)
Qinyi Lu, Yang Xu, Erik Poppleton, Kun Zhou, Petr Sulc, Nicholas Stephanopoulos, Yonggang Ke
DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes. Nano letters 24 (5) (2024)
Daria Bukharina, Katherine Cauffiel, Laura Mae Killingsworth, Justin A Brackenridge, Valeriia Poliukhova, Minkyu Kim, Justin Brower, Julio Bernal-Chanchavac, Nicholas Stephanopoulos, Vladimir V Tsukruk
Click-Chemistry-Enabled Functionalization of Cellulose Nanocrystals with Single-Stranded DNA for Directed Assembly. ACS biomaterials science & engineering (2024)
Teng Teng, Julio Bernal-Chanchavac, Nicholas Stephanopoulos, Carlos E Castro
Construction of Reconfigurable and Polymorphic DNA Origami Assemblies with Coiled-Coil Patches and Patterns. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 11 (20) (2024)
Teng Teng, Julio Bernal-Chanchavac, Nicholas Stephanopoulos, Carlos E Castro
Construction of Reconfigurable and Polymorphic DNA Origami Assemblies with Coiled-Coil Patches and Patterns. Advanced science (Weinheim, Baden-Wurttemberg, Germany) (2024)
Qinyi Lu, Yang Xu, Erik Poppleton, Kun Zhou, Petr Sulc, Nicholas Stephanopoulos, Yonggang Ke
DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes. Nano letters 24 (5) (2024)
Alexandra Novacek, Bryan Ugaz, Nicholas Stephanopoulos
Templating Peptide Chemistry with Nucleic Acids: Toward Artificial Ribosomes, Cell-Specific Therapeutics, and Novel Protein-Mimetic Architectures. Biomacromolecules 25 (7) (2024)
Teng Teng, Julio Bernal-Chanchavac, Nicholas Stephanopoulos, Carlos E Castro
Construction of Reconfigurable and Polymorphic DNA Origami Assemblies with Coiled-Coil Patches and Patterns. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 11 (20) (2024)
Teng Teng, Julio Bernal-Chanchavac, Nicholas Stephanopoulos, Carlos E Castro
Construction of Reconfigurable and Polymorphic DNA Origami Assemblies with Coiled-Coil Patches and Patterns. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 11 (20) (2024)
Qinyi Lu, Yang Xu, Erik Poppleton, Kun Zhou, Petr Sulc, Nicholas Stephanopoulos, Yonggang Ke
DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes. Nano letters (2024)
Hao Liu, Michael Matthies, John Russo, Lorenzo Rovigatti, Raghu Pradeep Narayanan, Thong Diep, Daniel McKeen, Oleg Gang, Nicholas Stephanopoulos, Francesco Sciortino, Hao Yan, Flavio Romano, Petr Sulc
Inverse design of a pyrochlore lattice of DNA origami through model-driven experiments. Science (New York, N.Y.) 384 (6697) (2024)
T Teng, J Bernal-Chanchavac, Nicholas Stephanopoulos, Carlos E Castro
Construction and reconfiguration of dynamic DNA origami assemblies with coiled-coil patches and patterns. bioRxiv : the preprint server for biology (2023)
Zhengyue Zhang, Jiřı Šponer, Giovanni Bussi, Vojtěch Mlýnský, Petr Sulc, Chad R Simmons, Nicholas Stephanopoulos, Miroslav Krepl
Atomistic Picture of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations. Journal of chemical information and modeling (2023)
Chad R Simmons, Alex Buchberger, Skylar J W Henry, Alexandra Novacek, Nour Eddine Fahmi, Tara MacCulloch, Nicholas Stephanopoulos, Hao Yan
Site-Specific Arrangement and Structure Determination of Minor Groove Binding Molecules in Self-Assembled Three-Dimensional DNA Crystals. Journal of the American Chemical Society (2023)
Zhengyue Zhang, Jiřı Šponer, Giovanni Bussi, Vojtěch Mlýnský, Petr Sulc, Chad R Simmons, Nicholas Stephanopoulos, Miroslav Krepl
Atomistic Picture of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations. Journal of chemical information and modeling 63 (9) (2023)
Yang Xu, Rong Zheng, Abhay Prasad, Minghui Liu, Zijian Wan, Xiaoyan Zhou, Ryan M Porter, Matthew Sample, Erik Poppleton, Jonah Procyk, Hao Liu, Yize Li, Shaopeng Wang, Hao Yan, Petr Sulc, Nicholas Stephanopoulos
High-affinity binding to the SARS-CoV-2 spike trimer by a nanostructured, trivalent protein-DNA synthetic antibody. bioRxiv : the preprint server for biology (2023)
Zhengyue Zhang, Jiřı Šponer, Giovanni Bussi, Vojtěch Mlýnský, Petr Sulc, Chad R Simmons, Nicholas Stephanopoulos, Miroslav Krepl
Atomistic Picture of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations. Journal of chemical information and modeling 63 (9) (2023)
Zhengyue Zhang, Jiřı Šponer, Giovanni Bussi, Vojtěch Mlýnský, Petr Sulc, Chad R Simmons, Nicholas Stephanopoulos, Miroslav Krepl
Atomistic Picture of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations. Journal of chemical information and modeling 63 (9) (2023)
Lu Yu, Yang Xu, Md Al-Amin, Shuoxing Jiang, Matthew Sample, Abhay Prasad, Nicholas Stephanopoulos, Petr Sulc, Hao Yan
CytoDirect: A Nucleic Acid Nanodevice for Specific and Efficient Delivery of Functional Payloads to the Cytoplasm. Journal of the American Chemical Society (2023)
Zhengyue Zhang, Jiřı Šponer, Giovanni Bussi, Vojtěch Mlýnský, Petr Sulc, Chad R Simmons, Nicholas Stephanopoulos, Miroslav Krepl
Atomistic Picture of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations. Journal of chemical information and modeling 63 (9) (2023)
Yen-Yu Hsu, Samuel John Chen, Julio Bernal-Chanchavac, Bineet Sharma, Hossein Moghimianavval, Nicholas Stephanopoulos, Allen P Liu
Calcium-triggered DNA-mediated membrane fusion in synthetic cells. Chemical communications (Cambridge, England) (2023)
Raghu Pradeep Narayanan, Abhay Prasad, Alex Buchberger, Lei Zou, Julio Bernal-Chanchavac, Tara MacCulloch, Nour Eddine Fahmi, Hao Yan, Fei Zhang, Matthew J Webber, Nicholas Stephanopoulos
High-Affinity Host-Guest Recognition for Efficient Assembly and Enzymatic Responsiveness of DNA Nanostructures. Small (Weinheim an der Bergstrasse, Germany) (2023)
Briana I Martinez, Gergey Alzaem Mousa, Kiera Fleck, Tara MacCulloch, Chris W Diehnelt, Nicholas Stephanopoulos, Sarah E Stabenfeldt
Uncovering temporospatial sensitive TBI targeting strategies via in vivo phage display. Science advances 8 (29) (2022)
Alex Buchberger, Kyle D Riker, Julio Bernal-Chanchavac, Raghu Pradeep Narayanan, Chad R Simmons, Nour Eddine Fahmi, Ronit Freeman, Nicholas Stephanopoulos
Bioactive Fibronectin-III 10 -DNA Origami Nanofibers Promote Cell Adhesion and Spreading. ACS applied bio materials (2022)
Tara MacCulloch, Alexandra Novacek, Nicholas Stephanopoulos
Proximity-enhanced synthesis of DNA-peptide-DNA triblock molecules. Chemical communications (Cambridge, England) 58 (25) (2022)
Raghu Pradeep Narayanan, Jonah Procyk, Purbasha Nandi, Abhay Prasad, Yang Xu, Erik Poppleton, Dewight Williams, Fei Zhang, Hao Yan, Po-Lin Chiu, Nicholas Stephanopoulos, Petr Sulc
Coarse-Grained Simulations for the Characterization and Optimization of Hybrid Protein-DNA Nanostructures. ACS nano 16 (9) (2022)
Allen P Liu, Eric A Appel, Paul D Ashby, Brendon M Baker, Elisa Franco, Luo Gu, Karmella Haynes, Neel S Joshi, April M Kloxin, Paul H J Kouwer, Jeetain Mittal, Leonardo Morsut, Vincent Noireaux, Sapun H Parekh, Rebecca Schulman, Sindy K Y Tang, Megan T Valentine, Sebastián L Vega, Wilfried Weber, Nicholas Stephanopoulos, Ovijit Chaudhuri
The living interface between synthetic biology and biomaterial design. Nature materials 21 (4) (2022)
Chad R Simmons, Tara MacCulloch, Miroslav Krepl, Michael Matthies, Alex Buchberger, Ilyssa Crawford, Jiřı Šponer, Petr Sulc, Nicholas Stephanopoulos, Hao Yan
The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nature communications 13 (1) (2022)
Skylar J W Henry, Nicholas Stephanopoulos
Functionalizing DNA nanostructures for therapeutic applications. Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology 13 (6) (2021)
Ankit Gangrade, Nicholas Stephanopoulos, Dhiraj Bhatia
Programmable, self-assembled DNA nanodevices for cellular programming and tissue engineering. Nanoscale 13 (40) (2021)
Barbora Smolková, Tara MacCulloch, Tyler F Rockwood, Minghui Liu, Skylar J W Henry, Adam Frtús, Mariia Uzhytchak, Mariia Lunova, Martin Hof, Piotr Jurkiewicz, Alexandr Dejneka, Nicholas Stephanopoulos, Oleg Lunov
Protein Corona Inhibits Endosomal Escape of Functionalized DNA Nanostructures in Living Cells. ACS applied materials & interfaces 13 (39) (2021)
Alex Buchberger, Harpinder Saini, Kiarash Rahmani Eliato, Azadeh Zare, Ryan Merkley, Yang Xu, Julio Bernal, Robert Ros, Mehdi Nikkhah, Nicholas Stephanopoulos
Reversible Control of Gelatin Hydrogel Stiffness by Using DNA Crosslinkers*. Chembiochem : a European journal of chemical biology 22 (10) (2021)
Yang Xu, Shuoxing Jiang, Chad R Simmons, Raghu Pradeep Narayanan, Fei Zhang, Ann-Marie Aziz, Hao Yan, Nicholas Stephanopoulos
Correction to Tunable Nanoscale Cages from Self-Assembling DNA and Protein Building Blocks. ACS nano 14 (6) (2020)
Alex Buchberger, Chad R Simmons, Nour Eddine Fahmi, Ronit Freeman, Nicholas Stephanopoulos
Hierarchical Assembly of Nucleic Acid/Coiled-Coil Peptide Nanostructures. Journal of the American Chemical Society 142 (3) (2020)
Chad R Simmons, Tara MacCulloch, Fei Zhang, Yan Liu, Nicholas Stephanopoulos, Hao Yan
A Self-Assembled Rhombohedral DNA Crystal Scaffold with Tunable Cavity Sizes and High-Resolution Structural Detail. Angewandte Chemie (International ed. in English) 59 (42) (2020)
Nicholas Stephanopoulos
Strategies for Stabilizing DNA Nanostructures to Biological Conditions. Chembiochem : a European journal of chemical biology 20 (17) (2019)
Angela C Stelson, Minghui Liu, Charles A E Little, Christian J Long, Nathan D Orloff, Nicholas Stephanopoulos, James C Booth
Label-free detection of conformational changes in switchable DNA nanostructures with microwave microfluidics. Nature communications 10 (1) (2019)
Yang Xu, Shuoxing Jiang, Chad R Simmons, Raghu Pradeep Narayanan, Fei Zhang, Ann-Marie Aziz, Hao Yan, Nicholas Stephanopoulos
Tunable Nanoscale Cages from Self-Assembling DNA and Protein Building Blocks. ACS nano 13 (3) (2019)
Nicholas Stephanopoulos
Peptide-Oligonucleotide Hybrid Molecules for Bioactive Nanomaterials. Bioconjugate chemistry 30 (7) (2019)
Tunjung Mahatmanto, Isyatul Azizah, Alex Buchberger, Nicholas Stephanopoulos
Progress toward sourcing plants for new bioconjugation tools: a screening evaluation of a model peptide ligase using a synthetic precursor. 3 Biotech 9 (12) (2019)
Ronit Freeman, Ming Han, Zaida Álvarez, Jacob A Lewis, James R Wester, Nicholas Stephanopoulos, Mark T McClendon, Cheyenne Lynsky, Jacqueline M Godbe, M Hussain Sangji, Erik Luijten, Samuel I Stupp
Reversible self-assembly of superstructured networks. Science (New York, N.Y.) 362 (6416) (2018)
Minghui Liu, Shuoxing Jiang, Omar Loza, Nour Eddine Fahmi, Petr Šulc, Nicholas Stephanopoulos
Rapid Photoactuation of a DNA Nanostructure using an Internal Photocaged Trigger Strand. Angewandte Chemie (International ed. in English) 57 (30) (2018)