Petr Sulc (Petr Šulc, P Šulc)

ORCID

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 39

Top Venues

Nano letters

The Journal of chemical physics

Journal of chemical information and modeling

Nature communications

The Rockefeller University

École Polytechnique (MSC)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

The Rockefeller University Sep 01 2014 - Dec 01 2017

United States

Fellow :: Center for Physics and Biology

Education History

École Polytechnique Sep 01 2007 - Jun 06 2009

France

MSC

Publications

Qinyi Lu, Yang Xu, Erik Poppleton, Kun Zhou, Petr Sulc, Nicholas Stephanopoulos, Yonggang Ke
DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes. Nano letters 24 (5) (2024)
Hao Liu, Michael Matthies, John Russo, Lorenzo Rovigatti, Raghu Pradeep Narayanan, Thong Diep, Daniel McKeen, Oleg Gang, Nicholas Stephanopoulos, Francesco Sciortino, Hao Yan, Flavio Romano, Petr Sulc
Inverse design of a pyrochlore lattice of DNA origami through model-driven experiments. Science (New York, N.Y.) 384 (6697) (2024)
Qinyi Lu, Yang Xu, Erik Poppleton, Kun Zhou, Petr Sulc, Nicholas Stephanopoulos, Yonggang Ke
DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes. Nano letters 24 (5) (2024)
F Tosti Guerra, Erik Poppleton, Petr Sulc, Lorenzo Rovigatti
ANNaMo: Coarse-grained modeling for folding and assembly of RNA and DNA systems. The Journal of chemical physics 160 (20) (2024)
Qinyi Lu, Yang Xu, Erik Poppleton, Kun Zhou, Petr Sulc, Nicholas Stephanopoulos, Yonggang Ke
DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes. Nano letters 24 (5) (2024)
Andreas Walbrun, Tianhe Wang, Michael Matthies, Petr Sulc, Friedrich C Simmel, Matthias Rief
Single-molecule force spectroscopy of toehold-mediated strand displacement. Nature communications 15 (1) (2024)
Qinyi Lu, Yang Xu, Erik Poppleton, Kun Zhou, Petr Sulc, Nicholas Stephanopoulos, Yonggang Ke
DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes. Nano letters 24 (5) (2024)
Eryk J Ratajczyk, Petr Sulc, Andrew J Turberfield, Jonathan P K Doye, Ard A Louis
Coarse-grained modeling of DNA-RNA hybrids. The Journal of chemical physics 160 (11) (2024)
Andreas Walbrun, Tianhe Wang, Michael Matthies, Petr Sulc, Friedrich C Simmel, Matthias Rief
Single-molecule force spectroscopy of toehold-mediated strand displacement. Nature communications 15 (1) (2024)
Qinyi Lu, Yang Xu, Erik Poppleton, Kun Zhou, Petr Sulc, Nicholas Stephanopoulos, Yonggang Ke
DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes. Nano letters (2024)
Hao Liu, Michael Matthies, John Russo, Lorenzo Rovigatti, Raghu Pradeep Narayanan, Thong Diep, Daniel McKeen, Oleg Gang, Nicholas Stephanopoulos, Francesco Sciortino, Hao Yan, Flavio Romano, Petr Sulc
Inverse design of a pyrochlore lattice of DNA origami through model-driven experiments. Science (New York, N.Y.) 384 (6697) (2024)
Zhengyue Zhang, Jiřı Šponer, Giovanni Bussi, Vojtěch Mlýnský, Petr Sulc, Chad R Simmons, Nicholas Stephanopoulos, Miroslav Krepl
Atomistic Picture of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations. Journal of chemical information and modeling (2023)
Joakim Bohlin, Andrew J Turberfield, Ard A Louis, Petr Sulc
Designing the Self-Assembly of Arbitrary Shapes Using Minimal Complexity Building Blocks. ACS nano (2023)
Camilla Beneduce, Francesco Sciortino, Petr Sulc, John Russo
Engineering Azeotropy to Optimize the Self-Assembly of Colloidal Mixtures. ACS nano (2023)
Zhengyue Zhang, Jiřı Šponer, Giovanni Bussi, Vojtěch Mlýnský, Petr Sulc, Chad R Simmons, Nicholas Stephanopoulos, Miroslav Krepl
Atomistic Picture of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations. Journal of chemical information and modeling 63 (9) (2023)
Camilla Beneduce, Diogo E P Pinto, Petr Sulc, Francesco Sciortino, John Russo
Two-step nucleation in a binary mixture of patchy particles. The Journal of chemical physics 158 (15) (2023)
Diogo E P Pinto, Petr Sulc, Francesco Sciortino, John Russo
Design strategies for the self-assembly of polyhedral shells. Proceedings of the National Academy of Sciences of the United States of America 120 (16) (2023)
Zhengyue Zhang, Jiřı Šponer, Giovanni Bussi, Vojtěch Mlýnský, Petr Sulc, Chad R Simmons, Nicholas Stephanopoulos, Miroslav Krepl
Atomistic Picture of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations. Journal of chemical information and modeling 63 (9) (2023)
Yue Tang, Hao Liu, Qi Wang, Xiaodong Qi, Lu Yu, Petr Sulc, Fei Zhang, Hao Yan, Shuoxing Jiang
DNA Origami Tessellations. Journal of the American Chemical Society (2023)
Camilla Beneduce, Diogo E P Pinto, Petr Sulc, Francesco Sciortino, John Russo
Two-step nucleation in a binary mixture of patchy particles. The Journal of chemical physics 158 (15) (2023)
Camilla Beneduce, Diogo E P Pinto, Petr Sulc, Francesco Sciortino, John Russo
Two-step nucleation in a binary mixture of patchy particles. The Journal of chemical physics 158 (15) (2023)
Zhengyue Zhang, Jiřı Šponer, Giovanni Bussi, Vojtěch Mlýnský, Petr Sulc, Chad R Simmons, Nicholas Stephanopoulos, Miroslav Krepl
Atomistic Picture of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations. Journal of chemical information and modeling 63 (9) (2023)
Lu Yu, Yang Xu, Md Al-Amin, Shuoxing Jiang, Matthew Sample, Abhay Prasad, Nicholas Stephanopoulos, Petr Sulc, Hao Yan
CytoDirect: A Nucleic Acid Nanodevice for Specific and Efficient Delivery of Functional Payloads to the Cytoplasm. Journal of the American Chemical Society (2023)
Zhengyue Zhang, Jiřı Šponer, Giovanni Bussi, Vojtěch Mlýnský, Petr Sulc, Chad R Simmons, Nicholas Stephanopoulos, Miroslav Krepl
Atomistic Picture of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations. Journal of chemical information and modeling 63 (9) (2023)
Mathias Centola, Erik Poppleton, Sujay Ray, Martin Centola, Robb Welty, Julián Valero, Nils G Walter, Petr Sulc, Michael Famulok
A rhythmically pulsing leaf-spring DNA-origami nanoengine that drives a passive follower. Nature nanotechnology (2023)
Raghu Pradeep Narayanan, Jonah Procyk, Purbasha Nandi, Abhay Prasad, Yang Xu, Erik Poppleton, Dewight Williams, Fei Zhang, Hao Yan, Po-Lin Chiu, Nicholas Stephanopoulos, Petr Sulc
Coarse-Grained Simulations for the Characterization and Optimization of Hybrid Protein-DNA Nanostructures. ACS nano 16 (9) (2022)
Andrea Di Gioacchino, Jonah Procyk, Marco Molari, John S Schreck, Yu Zhou, Yan Liu, Rémi Monasson, Simona Cocco, Petr Sulc
Generative and interpretable machine learning for aptamer design and analysis of in vitro sequence selection. PLoS computational biology 18 (9) (2022)
Lan Liu, Fan Hong, Hao Liu, Xu Zhou, Shuoxing Jiang, Petr Sulc, Jian-Hui Jiang, Hao Yan
A localized DNA finite-state machine with temporal resolution. Science advances 8 (12) (2022)
Lorenzo Rovigatti, John Russo, Flavio Romano, Michael Matthies, Lukáš Kroc, Petr Sulc
A simple solution to the problem of self-assembling cubic diamond crystals. Nanoscale 14 (38) (2022)
Chad R Simmons, Tara MacCulloch, Miroslav Krepl, Michael Matthies, Alex Buchberger, Ilyssa Crawford, Jiřı Šponer, Petr Sulc, Nicholas Stephanopoulos, Hao Yan
The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nature communications 13 (1) (2022)
John Russo, Flavio Romano, Lukáš Kroc, Francesco Sciortino, Lorenzo Rovigatti, Petr Sulc
SAT-assembly: a new approach for designing self-assembling systems. Journal of physics. Condensed matter : an Institute of Physics journal 34 (35) (2022)
Joakim Bohlin, Michael Matthies, Erik Poppleton, Jonah Procyk, Aatmik Mallya, Hao Yan, Petr Sulc
Design and simulation of DNA, RNA and hybrid protein-nucleic acid nanostructures with oxView. Nature protocols 17 (8) (2022)
Erik Poppleton, Roger Romero, Aatmik Mallya, Lorenzo Rovigatti, Petr Sulc
OxDNA.org: a public webserver for coarse-grained simulations of DNA and RNA nanostructures. Nucleic acids research 49 (W1) (2021)
Ze Yu, Mathias Centola, Julián Valero, Michael Matthies, Petr Sulc, Michael Famulok
A Self-Regulating DNA Rotaxane Linear Actuator Driven by Chemical Energy. Journal of the American Chemical Society 143 (33) (2021)
Hao Liu, Fan Hong, Francesca Smith, John Goertz, Thomas E Ouldridge, Molly M Stevens, Hao Yan, Petr Sulc
Kinetics of RNA and RNA:DNA Hybrid Strand Displacement. ACS synthetic biology 10 (11) (2021)
Erik Poppleton, Aatmik Mallya, Swarup Dey, Joel Joseph, Petr Sulc
Nanobase.org: a repository for DNA and RNA nanostructures. Nucleic acids research (2021)
Guangbao Yao, Fei Zhang, Fei Wang, Tianhuan Peng, Hao Liu, Erik Poppleton, Petr Sulc, Shuoxing Jiang, Lan Liu, Chen Gong, Xinxin Jing, Xiaoguo Liu, Lihua Wang, Yan Liu, Chun-Hai Fan, Hao Yan
Meta-DNA structures. Nature chemistry 12 (11) (2020)
Andrea Di Gioacchino, Petr Sulc, Anastassia V Komarova, Benjamin D Greenbaum, Remi Monasson, Simona Cocco
The heterogeneous landscape and early evolution of pathogen-associated CpG dinucleotides in SARS-CoV-2. bioRxiv : the preprint server for biology (2020)
Guangbao Yao, Fei Zhang, Fei Wang, Tianhuan Peng, Hao Liu, Erik Poppleton, Petr Sulc, Shuoxing Jiang, Lan Liu, Chen Gong, Xinxin Jing, Xiaoguo Liu, Lihua Wang, Yan Liu, Chun-Hai Fan, Hao Yan
Author Correction: Meta-DNA structures. Nature chemistry (2020)

Petr Sulc.css-eqlu8i{font-size:small;padding-left:4px;} (Petr Šulc, P Šulc)

Publication Activity (10 Years)

Top Topics

Top Venues

Petr Sulc (Petr Šulc, P Šulc)