Patrick A Limbach

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 28

Top Venues

Methods and protocols

Biomedicines

Insect molecular biology

Journal of the American Society for Mass Spectrometry

University of Cincinnati

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Cincinnati Jun 01 2001

United States

Professor :: Chemistry

Louisiana State University Jan 01 1995 - May 31 2001

United States

Assistant/Associate Professor :: Chemistry

Publications

Alice Baek, Asif Rayhan, Ga-Eun Lee, Sarah Golconda, Hannah Yu, Shihyoung Kim, Patrick A Limbach, Balasubrahmanyam Addepalli, Sanggu Kim
Mapping m 6 A Sites on HIV-1 RNA Using Oligonucleotide LC-MS/MS. Methods and protocols 7 (1) (2024)
Alice Baek, Asif Rayhan, Ga-Eun Lee, Sarah Golconda, Hannah Yu, Shihyoung Kim, Patrick A Limbach, Balasubrahmanyam Addepalli, Sanggu Kim
Mapping m 6 A Sites on HIV-1 RNA Using Oligonucleotide LC-MS/MS. Methods and protocols 7 (1) (2024)
Melissa Kelley, Christopher J Holmes, Cassandra Herbert, Asif Rayhan, Judd Joves, Melissa Uhran, Lucas Klaus, Ronja Frigard, Khwahish Singh, Patrick A Limbach, Balasubrahmanyam Addepalli, Joshua B Benoit
Tyrosine transfer RNA levels and modifications during blood-feeding and vitellogenesis in the mosquito, Aedes aegypti. Insect molecular biology (2024)
Melissa Kelley, Christopher J Holmes, Cassandra Herbert, Asif Rayhan, Judd Joves, Melissa Uhran, Lucas Klaus, Ronja Frigard, Khwahish Singh, Patrick A Limbach, Balasubrahmanyam Addepalli, Joshua B Benoit
Tyrosine transfer RNA levels and modifications during blood-feeding and vitellogenesis in the mosquito, Aedes aegypti. Insect molecular biology (2024)
Alice Baek, Asif Rayhan, Ga-Eun Lee, Sarah Golconda, Hannah Yu, Shihyoung Kim, Patrick A Limbach, Balasubrahmanyam Addepalli, Sanggu Kim
Mapping m 6 A Sites on HIV-1 RNA Using Oligonucleotide LC-MS/MS. Methods and protocols 7 (1) (2024)
Melissa Kelley, Christopher J Holmes, Cassandra Herbert, Asif Rayhan, Judd Joves, Melissa Uhran, Lucas Klaus, Ronja Frigard, Khwahish Singh, Patrick A Limbach, Balasubrahmanyam Addepalli, Joshua B Benoit
Tyrosine transfer RNA levels and modifications during blood-feeding and vitellogenesis in the mosquito, Aedes aegypti. Insect molecular biology (2024)
Alice Baek, Asif Rayhan, Ga-Eun Lee, Sarah Golconda, Hannah Yu, Shihyoung Kim, Patrick A Limbach, Balasubrahmanyam Addepalli, Sanggu Kim
Mapping m 6 A Sites on HIV-1 RNA Using Oligonucleotide LC-MS/MS. Methods and protocols 7 (1) (2024)
Alice Baek, Asif Rayhan, Ga-Eun Lee, Sarah Golconda, Hannah Yu, Shihyoung Kim, Patrick A Limbach, Balasubrahmanyam Addepalli, Sanggu Kim
Mapping m 6 A Sites on HIV-1 RNA Using Oligonucleotide LC-MS/MS. Methods and protocols 7 (1) (2024)
Cassandra Herbert, Corinna L Ohrnberger, Ella Quinlisk, Balasubrahmanyam Addepalli, Patrick A Limbach
Characterizing Benzo[a]pyrene Adducts in Transfer RNAs Using Liquid Chromatography Coupled with Tandem Mass Spectrometry (LC-MS/MS). Biomedicines 11 (12) (2023)
Robert L Ross, Ningxi Yu, Ruoxia Zhao, Andrew Wood, Patrick A Limbach
Automated Identification of Modified Nucleosides during HRAM-LC-MS/MS using a Metabolomics ID Workflow with Neutral Loss Detection. Journal of the American Society for Mass Spectrometry (2023)
Cassandra Herbert, Corinna L Ohrnberger, Ella Quinlisk, Balasubrahmanyam Addepalli, Patrick A Limbach
Characterizing Benzo[a]pyrene Adducts in Transfer RNAs Using Liquid Chromatography Coupled with Tandem Mass Spectrometry (LC-MS/MS). Biomedicines 11 (12) (2023)
Cassandra Herbert, Corinna L Ohrnberger, Ella Quinlisk, Balasubrahmanyam Addepalli, Patrick A Limbach
Characterizing Benzo[a]pyrene Adducts in Transfer RNAs Using Liquid Chromatography Coupled with Tandem Mass Spectrometry (LC-MS/MS). Biomedicines 11 (12) (2023)
Melissa Kelley, Mellie June Paulines, George Yoshida, Ryan Myers, Manasses Jora, Joel P Levoy, Balasubrahmanyam Addepalli, Joshua B Benoit, Patrick A Limbach
Ionizing radiation and chemical oxidant exposure impacts on Cryptococcus neoformans transfer RNAs. PloS one 17 (3) (2022)
Manasses Jora, Daniel Corcoran, Gwenn G Parungao, Peter A Lobue, Luiz F L Oliveira, George Stan, Balasubrahmanyam Addepalli, Patrick A Limbach
Higher-Energy Collisional Dissociation Mass Spectral Networks for the Rapid, Semi-automated Characterization of Known and Unknown Ribonucleoside Modifications. Analytical chemistry 94 (40) (2022)
Priti Thakur, Jowad Atway, Patrick A Limbach, Balasubrahmanyam Addepalli
RNA Cleavage Properties of Nucleobase-Specific RNase MC1 and Cusativin Are Determined by the Dinucleotide-Binding Interactions in the Enzyme-Active Site. International journal of molecular sciences 23 (13) (2022)
Luigi D'Ascenzo, Anna M Popova, Scott Abernathy, Kai Sheng, Patrick A Limbach, James R Williamson
Pytheas: a software package for the automated analysis of RNA sequences and modifications via tandem mass spectrometry. Nature communications 13 (1) (2022)
Yasemin Yoluç, Gregor Ammann, Pierre Barraud, Manasses Jora, Patrick A Limbach, Motorin Yuri, Virginie Marchand, Carine Tisné, Kayla Borland, Stefanie M Kellner
Instrumental analysis of RNA modifications. Critical reviews in biochemistry and molecular biology 56 (2) (2021)
Sneha Kulkarni, Mary Anne T Rubio, Eva Hegedűsová, Robert L Ross, Patrick A Limbach, Juan D Alfonzo, Zdeněk Paris
Preferential import of queuosine-modified tRNAs into Trypanosoma brucei mitochondrion is critical for organellar protein synthesis. Nucleic acids research 49 (14) (2021)
Congliang Sun, Patrick A Limbach, Balasubrahmanyam Addepalli
Characterization of UVA-Induced Alterations to Transfer RNA Sequences. Biomolecules 10 (11) (2020)
Mellie June Paulines, Collin Wetzel, Patrick A Limbach
Using spectral matching to interpret LC-MS/MS data during RNA modification mapping. Journal of mass spectrometry : JMS 54 (11) (2020)
Manasses Jora, Kayla Borland, Scott Abernathy, Ruoxia Zhao, Melissa Kelley, Stefanie Kellner, Balasubrahmanyam Addepalli, Patrick A Limbach
Chemical Amination/Imination of Carbonothiolated Nucleosides During RNA Hydrolysis. Angewandte Chemie (International ed. in English) 60 (8) (2020)
Ningxi Yu, Manasses Jora, Beulah Solivio, Priti Thakur, Carlos G Acevedo-Rocha, Lennart Randau, Valérie de Crécy-Lagard, Balasubrahmanyam Addepalli, Patrick A Limbach
tRNA Modification Profiles and Codon-Decoding Strategies in Methanocaldococcus jannaschii. Journal of bacteriology 201 (9) (2019)
L Peter Sarin, Sandra D Kienast, Johannes Leufken, Robert L Ross, Agnieszka Dziergowska, Katarzyna Debiec, Elzbieta Sochacka, Patrick A Limbach, Christian Fufezan, Hannes C A Drexler, Sebastian Andreas Leidel
Nano LC-MS using capillary columns enables accurate quantification of modified ribonucleosides at low femtomol levels. RNA (New York, N.Y.) 24 (10) (2018)
Manasses Jora, Andrew P Burns, Robert L Ross, Peter A Lobue, Ruoxia Zhao, Cody M Palumbo, Peter A Beal, Balasubrahmanyam Addepalli, Patrick A Limbach
Differentiating Positional Isomers of Nucleoside Modifications by Higher-Energy Collisional Dissociation Mass Spectrometry (HCD MS). Journal of the American Society for Mass Spectrometry 29 (8) (2018)
Kevin C Baldridge, Manasses Jora, Andre C Maranhao, Matthew M Quick, Balasubrahmanyam Addepalli, Jennifer S Brodbelt, Andrew D Ellington, Patrick A Limbach, Lydia M Contreras
Directed Evolution of Heterologous tRNAs Leads to Reduced Dependence on Post-transcriptional Modifications. ACS synthetic biology 7 (5) (2018)
Ningxi Yu, Peter A Lobue, Xiaoyu Cao, Patrick A Limbach
RNAModMapper: RNA Modification Mapping Software for Analysis of Liquid Chromatography Tandem Mass Spectrometry Data. Analytical chemistry 89 (20) (2017)
Balasubrahmanyam Addepalli, Patrick A Limbach
Pseudouridine in the Anticodon of Escherichia coli tRNATyr(QΨA) Is Catalyzed by the Dual Specificity Enzyme RluF. The Journal of biological chemistry 291 (42) (2016)
Patrick A Limbach, Mellie June Paulines
Going global: the new era of mapping modifications in RNA. Wiley interdisciplinary reviews. RNA 8 (1) (2016)

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Publication Activity (10 Years)

Top Topics

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Patrick A Limbach