Peter J Skene

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 8

Top Topics

Transcription Factor

Quality Control

Top Venues

Nature communications

Nature immunology

BMC bioinformatics

This page only lists publications with an associated author ORCID identifier.

Publications

Samir Rachid Zaim, Mark-Phillip Pebworth, Imran McGrath, Lauren Y Okada, Morgan Weiss, Julian Reading, Julie L Czartoski, Troy R Torgerson, M Juliana McElrath, Thomas F Bumol, Peter J Skene, Xiao-Jun Li
MOCHA's advanced statistical modeling of scATAC-seq data enables functional genomic inference in large human cohorts. Nature communications 15 (1) (2024)
Samir Rachid Zaim, Mark-Phillip Pebworth, Imran McGrath, Lauren Y Okada, Morgan Weiss, Julian Reading, Julie L Czartoski, Troy R Torgerson, M Juliana McElrath, Thomas F Bumol, Peter J Skene, Xiao-Jun Li
MOCHA's advanced statistical modeling of scATAC-seq data enables functional genomic inference in large human cohorts. Nature communications 15 (1) (2024)
Samir Rachid Zaim, Mark-Phillip Pebworth, Imran McGrath, Lauren Y Okada, Morgan Weiss, Julian Reading, Julie L Czartoski, Troy R Torgerson, M Juliana McElrath, Thomas F Bumol, Peter J Skene, Xiao-Jun Li
MOCHA's advanced statistical modeling of scATAC-seq data enables functional genomic inference in large human cohorts. Nature communications 15 (1) (2024)
Zachary Thomson, Ziyuan He, Elliott G Swanson, Katherine Henderson, Cole Phalen, Samir Rachid Zaim, Mark-Phillip Pebworth, Lauren Y Okada, Alexander T Heubeck, Charles R Roll, Veronica Hernandez, Morgan Weiss, Palak C Genge, Julian Reading, Josephine R Giles, Sasikanth Manne, Jeanette Dougherty, C J Jasen, Allison R Greenplate, Lynne A Becker, Lucas T Gray, Suhas V Vasaikar, Gregory L Szeto, Adam K Savage, Cate Speake, Jane H Buckner, Xiao-Jun Li, Thomas F Bumol, E John Wherry, Troy R Torgerson, Laura A Vella, Sarah E Henrickson, Peter J Skene, Claire E Gustafson
Author Correction: Trimodal single-cell profiling reveals a novel pediatric CD8αα + T cell subset and broad age-related molecular reprogramming across the T cell compartment. Nature immunology (2024)
Zachary Thomson, Ziyuan He, Elliott G Swanson, Katherine Henderson, Cole Phalen, Samir Rachid Zaim, Mark-Phillip Pebworth, Lauren Y Okada, Alexander T Heubeck, Charles R Roll, Veronica Hernandez, Morgan Weiss, Palak C Genge, Julian Reading, Josephine R Giles, Sasikanth Manne, Jeanette Dougherty, C J Jasen, Allison R Greenplate, Lynne A Becker, Lucas T Gray, Suhas V Vasaikar, Gregory L Szeto, Adam K Savage, Cate Speake, Jane H Buckner, Xiao-Jun Li, Thomas F Bumol, E John Wherry, Troy R Torgerson, Laura A Vella, Sarah E Henrickson, Peter J Skene, Claire E Gustafson
Trimodal single-cell profiling reveals a novel pediatric CD8αα + T cell subset and broad age-related molecular reprogramming across the T cell compartment. Nature immunology (2023)
Elliott G Swanson, Julian Reading, Lucas T Gray, Peter J Skene
BarWare: efficient software tools for barcoded single-cell genomics. BMC bioinformatics 23 (1) (2022)
Elliott G Swanson, Cara Lord, Julian Reading, Alexander T Heubeck, Palak C Genge, Zachary James Thomson, Morgan DA Weiss, Xiao-Jun Li, Adam K Savage, Richard R Green, Troy R Torgerson, Thomas F Bumol, Lucas T Gray, Peter J Skene
Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq. eLife 10 (2021)
Aarthi Talla, Suhas V Vasaikar, Maria P Lemos, Zoe Moodie, Mark-Phillip Lee Pebworth, Kathy E Henderson, Kristen W Cohen, Julie L Czartoski, Lilin Lai, Mehul S Suthar, Alexander T Heubeck, Palak C Genge, Charles R Roll, Morgan DA Weiss, Julian Reading, Nina Kondza, Hugh MacMillan, Olivia C Fong, Zachary James Thomson, Lucas T Gray, Evan William Newell, Ernest M Coffey, Paul Meijer, Lynne A Becker, Stephen C De Rosa, Troy R Torgerson, Peter J Skene, Xiaojun Li, Gregory Lee Szeto, M Juliana McElrath, Thomas F Bumol
Longitudinal immune dynamics of mild COVID-19 define signatures of recovery and persistence. bioRxiv : the preprint server for biology (2021)