Rainer Merkl

ResearcherID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2021
Publications (10 Years): 15

Top Topics

Dna Methylation

Diabetic Retinopathy

Top Venues

BMC bioinformatics

Proceedings of the National Academy of Sciences of the United States of America

PLoS computational biology

This page only lists publications with an associated author ORCID identifier.

Publications

Julian Nazet, Elmar W Lang, Rainer Merkl
Rosetta:MSF:NN: Boosting performance of multi-state computational protein design with a neural network. PloS one 16 (8) (2021)
Samuel Schmitz, Moritz Ertelt, Rainer Merkl, Jens Meiler
Rosetta design with co-evolutionary information retains protein function. PLoS computational biology 17 (1) (2021)
Leonhard Heizinger, Rainer Merkl
Evidence for the preferential reuse of sub-domain motifs in primordial protein folds. Proteins 89 (9) (2021)
Robert Esch, Rainer Merkl
Conserved genomic neighborhood is a strong but no perfect indicator for a direct interaction of microbial gene products. BMC bioinformatics 21 (1) (2020)
Nadja A Simeth, Thomas Kinateder, Chitra Rajendran, Julian Nazet, Rainer Merkl, Reinhard Sterner, Burkhard König, Andrea C Kneuttinger
Towards Photochromic Azobenzene-Based Inhibitors for Tryptophan Synthase. Chemistry (Weinheim an der Bergstrasse, Germany) 27 (7) (2020)
Michael Schupfner, Kristina Straub, Florian Busch, Rainer Merkl, Reinhard Sterner
Analysis of allosteric communication in a multienzyme complex by ancestral sequence reconstruction. Proceedings of the National Academy of Sciences of the United States of America 117 (1) (2019)
Kristina Straub, Mona Linde, Cosimo Kropp, Samuel Blanquart, Patrick Babinger, Rainer Merkl
Sequence selection by FitSS4ASR alleviates ancestral sequence reconstruction as exemplified for geranylgeranylglyceryl phosphate synthase. Biological chemistry 400 (3) (2019)
Andrea C Kneuttinger, Stefanie Zwisele, Kristina Straub, Astrid Bruckmann, Florian Busch, Thomas Kinateder, Barbara Gaim, Vicki H Wysocki, Rainer Merkl, Reinhard Sterner
Light-Regulation of Tryptophan Synthase by Combining Protein Design and Enzymology. International journal of molecular sciences 20 (20) (2019)
Karolina Plössl, Kristina Straub, Verena Schmid, Franziska Strunz, Jens Wild, Rainer Merkl, Bernhard H F Weber, Ulrike Friedrich
Identification of the retinoschisin-binding site on the retinal Na/K-ATPase. PloS one 14 (5) (2019)
Maximilian G Plach, Florian Semmelmann, Florian Busch, Markus Busch, Leonhard Heizinger, Vicki H Wysocki, Rainer Merkl, Reinhard Sterner
Evolutionary diversification of protein-protein interactions by interface add-ons. Proceedings of the National Academy of Sciences of the United States of America 114 (40) (2017)
Valery Veprinskiy, Leonhard Heizinger, Maximilian G Plach, Rainer Merkl
Assessing in silico the recruitment and functional spectrum of bacterial enzymes from secondary metabolism. BMC evolutionary biology 17 (1) (2017)
Florian Kandlinger, Maximilian G Plach, Rainer Merkl
AGeNNT: annotation of enzyme families by means of refined neighborhood networks. BMC bioinformatics 18 (1) (2017)
Patrick Löffler, Samuel Schmitz, Enrico Hupfeld, Reinhard Sterner, Rainer Merkl
Rosetta:MSF: a modular framework for multi-state computational protein design. PLoS computational biology 13 (6) (2017)
Rainer Merkl, Reinhard Sterner
Ancestral protein reconstruction: techniques and applications. Biological chemistry 397 (1) (2016)
Elisabeth Silberhorn, Uwe Schwartz, Patrick Löffler, Samuel Schmitz, Anne Symelka, Tania de Koning-Ward, Rainer Merkl, Gernot Längst
Plasmodium falciparum Nucleosomes Exhibit Reduced Stability and Lost Sequence Dependent Nucleosome Positioning. PLoS pathogens 12 (12) (2016)