Shingo Iwami

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 26

Top Topics

Randomized Controlled Trial

Reactive Oxygen Species

Hepatitis C Virus

Top Venues

PLoS computational biology

Proceedings of the National Academy of Sciences of the United States of America

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Yong Dam Jeong, William S Hart, Robin N Thompson, Masahiro Ishikane, Takara Nishiyama, Hyeongki Park, Noriko Iwamoto, Ayana Sakurai, Michiyo Suzuki, Kazuyuki Aihara, Koichi Watashi, Eline L M Op de Coul, Norio Ohmagari, Jacco Wallinga, Shingo Iwami, Fuminari Miura
Modelling the effectiveness of an isolation strategy for managing mpox outbreaks with variable infectiousness profiles. Nature communications 15 (1) (2024)
Naotoshi Nakamura, Yurie Kobashi, Kwang Su Kim, Hyeongki Park, Yuta Tani, Yuzo Shimazu, Tianchen Zhao, Yoshitaka Nishikawa, Fumiya Omata, Moe Kawashima, Makoto Yoshida, Toshiki Abe, Yoshika Saito, Yuki Senoo, Saori Nonaka, Morihito Takita, Chika Yamamoto, Takeshi Kawamura, Akira Sugiyama, Aya Nakayama, Yudai Kaneko, Yong Dam Jeong, Daiki Tatematsu, Marwa Akao, Yoshitaka Sato, Shoya Iwanami, Yasuhisa Fujita, Masatoshi Wakui, Kazuyuki Aihara, Tatsuhiko Kodama, Kenji Shibuya, Shingo Iwami, Masaharu Tsubokura
Modeling and predicting individual variation in COVID-19 vaccine-elicited antibody response in the general population. PLOS digital health 3 (5) (2024)
Kosaku Kitagawa, Kwang Su Kim, Masashi Iwamoto, Sanae Hayashi, Hyeongki Park, Takara Nishiyama, Naotoshi Nakamura, Yasuhisa Fujita, Shinji Nakaoka, Kazuyuki Aihara, Alan S Perelson, Lena Allweiss, Maura Dandri, Koichi Watashi, Yasuhito Tanaka, Shingo Iwami
Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation to analyze extracellular viral markers. PLoS computational biology 20 (3) (2024)
Kosaku Kitagawa, Kwang Su Kim, Masashi Iwamoto, Sanae Hayashi, Hyeongki Park, Takara Nishiyama, Naotoshi Nakamura, Yasuhisa Fujita, Shinji Nakaoka, Kazuyuki Aihara, Alan S Perelson, Lena Allweiss, Maura Dandri, Koichi Watashi, Yasuhito Tanaka, Shingo Iwami
Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation to analyze extracellular viral markers. PLoS computational biology 20 (3) (2024)
Kosaku Kitagawa, Kwang Su Kim, Masashi Iwamoto, Sanae Hayashi, Hyeongki Park, Takara Nishiyama, Naotoshi Nakamura, Yasuhisa Fujita, Shinji Nakaoka, Kazuyuki Aihara, Alan S Perelson, Lena Allweiss, Maura Dandri, Koichi Watashi, Yasuhito Tanaka, Shingo Iwami
Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation to analyze extracellular viral markers. PLoS computational biology 20 (3) (2024)
Yong Dam Jeong, William S Hart, Robin N Thompson, Masahiro Ishikane, Takara Nishiyama, Hyeongki Park, Noriko Iwamoto, Ayana Sakurai, Michiyo Suzuki, Kazuyuki Aihara, Koichi Watashi, Eline L M Op de Coul, Norio Ohmagari, Jacco Wallinga, Shingo Iwami, Fuminari Miura
Modelling the effectiveness of an isolation strategy for managing mpox outbreaks with variable infectiousness profiles. Nature communications 15 (1) (2024)
Kosaku Kitagawa, Kwang Su Kim, Masashi Iwamoto, Sanae Hayashi, Hyeongki Park, Takara Nishiyama, Naotoshi Nakamura, Yasuhisa Fujita, Shinji Nakaoka, Kazuyuki Aihara, Alan S Perelson, Lena Allweiss, Maura Dandri, Koichi Watashi, Yasuhito Tanaka, Shingo Iwami
Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation to analyze extracellular viral markers. PLoS computational biology 20 (3) (2024)
Naotoshi Nakamura, Yurie Kobashi, Kwang Su Kim, Hyeongki Park, Yuta Tani, Yuzo Shimazu, Tianchen Zhao, Yoshitaka Nishikawa, Fumiya Omata, Moe Kawashima, Makoto Yoshida, Toshiki Abe, Yoshika Saito, Yuki Senoo, Saori Nonaka, Morihito Takita, Chika Yamamoto, Takeshi Kawamura, Akira Sugiyama, Aya Nakayama, Yudai Kaneko, Yong Dam Jeong, Daiki Tatematsu, Marwa Akao, Yoshitaka Sato, Shoya Iwanami, Yasuhisa Fujita, Masatoshi Wakui, Kazuyuki Aihara, Tatsuhiko Kodama, Kenji Shibuya, Shingo Iwami, Masaharu Tsubokura
Modeling and predicting individual variation in COVID-19 vaccine-elicited antibody response in the general population. PLOS digital health 3 (5) (2024)
Kosaku Kitagawa, Kwang Su Kim, Masashi Iwamoto, Sanae Hayashi, Hyeongki Park, Takara Nishiyama, Naotoshi Nakamura, Yasuhisa Fujita, Shinji Nakaoka, Kazuyuki Aihara, Alan S Perelson, Lena Allweiss, Maura Dandri, Koichi Watashi, Yasuhito Tanaka, Shingo Iwami
Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation to analyze extracellular viral markers. PLoS computational biology 20 (3) (2024)
Sho Miyamoto, Takara Nishiyama, Akira Ueno, Hyeongki Park, Takayuki Kanno, Naotoshi Nakamura, Seiya Ozono, Kazuyuki Aihara, Kenichiro Takahashi, Yuuki Tsuchihashi, Masahiro Ishikane, Takeshi Arashiro, Shinji Saito, Akira Ainai, Yuichiro Hirata, Shun Iida, Harutaka Katano, Minoru Tobiume, Kenzo Tokunaga, Tsuguto Fujimoto, Michiyo Suzuki, Maki Nagashima, Hidenori Nakagawa, Masashi Narita, Yasuyuki Kato, Hidetoshi Igari, Kaori Fujita, Tatsuo Kato, Kazutoshi Hiyama, Keisuke Shindou, Takuya Adachi, Kazuaki Fukushima, Fukumi Nakamura-Uchiyama, Ryota Hase, Yukihiro Yoshimura, Masaya Yamato, Yasuhiro Nozaki, Norio Ohmagari, Motoi Suzuki, Tomoya Saito, Shingo Iwami, Tadaki Suzuki
Infectious virus shedding duration reflects secretory IgA antibody response latency after SARS-CoV-2 infection. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
William S Hart, Hyeongki Park, Yong Dam Jeong, Kwang Su Kim, Raiki Yoshimura, Robin N Thompson, Shingo Iwami
Analysis of the risk and pre-emptive control of viral outbreaks accounting for within-host dynamics: SARS-CoV-2 as a case study. Proceedings of the National Academy of Sciences of the United States of America 120 (41) (2023)
Sho Miyamoto, Takara Nishiyama, Akira Ueno, Hyeongki Park, Takayuki Kanno, Naotoshi Nakamura, Seiya Ozono, Kazuyuki Aihara, Kenichiro Takahashi, Yuuki Tsuchihashi, Masahiro Ishikane, Takeshi Arashiro, Shinji Saito, Akira Ainai, Yuichiro Hirata, Shun Iida, Harutaka Katano, Minoru Tobiume, Kenzo Tokunaga, Tsuguto Fujimoto, Michiyo Suzuki, Maki Nagashima, Hidenori Nakagawa, Masashi Narita, Yasuyuki Kato, Hidetoshi Igari, Kaori Fujita, Tatsuo Kato, Kazutoshi Hiyama, Keisuke Shindou, Takuya Adachi, Kazuaki Fukushima, Fukumi Nakamura-Uchiyama, Ryota Hase, Yukihiro Yoshimura, Masaya Yamato, Yasuhiro Nozaki, Norio Ohmagari, Motoi Suzuki, Tomoya Saito, Shingo Iwami, Tadaki Suzuki
Infectious virus shedding duration reflects secretory IgA antibody response latency after SARS-CoV-2 infection. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Sho Miyamoto, Takara Nishiyama, Akira Ueno, Hyeongki Park, Takayuki Kanno, Naotoshi Nakamura, Seiya Ozono, Kazuyuki Aihara, Kenichiro Takahashi, Yuuki Tsuchihashi, Masahiro Ishikane, Takeshi Arashiro, Shinji Saito, Akira Ainai, Yuichiro Hirata, Shun Iida, Harutaka Katano, Minoru Tobiume, Kenzo Tokunaga, Tsuguto Fujimoto, Michiyo Suzuki, Maki Nagashima, Hidenori Nakagawa, Masashi Narita, Yasuyuki Kato, Hidetoshi Igari, Kaori Fujita, Tatsuo Kato, Kazutoshi Hiyama, Keisuke Shindou, Takuya Adachi, Kazuaki Fukushima, Fukumi Nakamura-Uchiyama, Ryota Hase, Yukihiro Yoshimura, Masaya Yamato, Yasuhiro Nozaki, Norio Ohmagari, Motoi Suzuki, Tomoya Saito, Shingo Iwami, Tadaki Suzuki
Infectious virus shedding duration reflects secretory IgA antibody response latency after SARS-CoV-2 infection. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Junya Sunagawa, Hyeongki Park, Kwang Su Kim, Ryo Komorizono, Sooyoun Choi, Lucia Ramirez Torres, Joohyeon Woo, Yong Dam Jeong, William S Hart, Robin N Thompson, Kazuyuki Aihara, Shingo Iwami, Ryo Yamaguchi
Isolation may select for earlier and higher peak viral load but shorter duration in SARS-CoV-2 evolution. Nature communications 14 (1) (2023)
Kosaku Kitagawa, Kwang Su Kim, Masashi Iwamoto, Sanae Hayashi, Hyeongki Park, Takara Nishiyama, Naotoshi Nakamura, Yasuhisa Fujita, Shinji Nakaoka, Kazuyuki Aihara, Alan S Perelson, Lena Allweiss, Maura Dandri, Koichi Watashi, Yasuhito Tanaka, Shingo Iwami
Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers. bioRxiv : the preprint server for biology (2023)
Sho Miyamoto, Takara Nishiyama, Akira Ueno, Hyeongki Park, Takayuki Kanno, Naotoshi Nakamura, Seiya Ozono, Kazuyuki Aihara, Kenichiro Takahashi, Yuuki Tsuchihashi, Masahiro Ishikane, Takeshi Arashiro, Shinji Saito, Akira Ainai, Yuichiro Hirata, Shun Iida, Harutaka Katano, Minoru Tobiume, Kenzo Tokunaga, Tsuguto Fujimoto, Michiyo Suzuki, Maki Nagashima, Hidenori Nakagawa, Masashi Narita, Yasuyuki Kato, Hidetoshi Igari, Kaori Fujita, Tatsuo Kato, Kazutoshi Hiyama, Keisuke Shindou, Takuya Adachi, Kazuaki Fukushima, Fukumi Nakamura-Uchiyama, Ryota Hase, Yukihiro Yoshimura, Masaya Yamato, Yasuhiro Nozaki, Norio Ohmagari, Motoi Suzuki, Tomoya Saito, Shingo Iwami, Tadaki Suzuki
Infectious virus shedding duration reflects secretory IgA antibody response latency after SARS-CoV-2 infection. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Junya Sunagawa, Ryo Komorizono, Hyeongki Park, William S Hart, Robin N Thompson, Akiko Makino, Keizo Tomonaga, Shingo Iwami, Ryo Yamaguchi
Contact-number-driven virus evolution: A multi-level modeling framework for the evolution of acute or persistent RNA virus infection. PLoS computational biology 19 (5) (2023)
Yong Dam Jeong, Keisuke Ejima, Kwang Su Kim, Woo Joohyeon, Shoya Iwanami, Yasuhisa Fujita, Il Hyo Jung, Kazuyuki Aihara, Kenji Shibuya, Shingo Iwami, Ana I Bento, Marco Ajelli
Designing isolation guidelines for COVID-19 patients with rapid antigen tests. Nature communications 13 (1) (2022)
Ryuichi Kumata, Shoya Iwanami, Katrina B Mar, Yusuke Kakizoe, Naoko Misawa, Shinji Nakaoka, Yoshio Koyanagi, Alan S Perelson, John W Schoggins, Shingo Iwami, Kei Sato
Antithetic effect of interferon-α on cell-free and cell-to-cell HIV-1 infection. PLoS computational biology 18 (4) (2022)
Yong Dam Jeong, Keisuke Ejima, Kwang Su Kim, Shoya Iwanami, Ana I Bento, Yasuhisa Fujita, Il Hyo Jung, Kazuyuki Aihara, Koichi Watashi, Taiga Miyazaki, Takaji Wakita, Shingo Iwami, Marco Ajelli
Revisiting the guidelines for ending isolation for COVID-19 patients. eLife 10 (2021)
Shoya Iwanami, Keisuke Ejima, Kawang Su Kim, Koji Noshita, Yasuhisa Fujita, Taiga Miyazaki, Shigeru Kohno, Yoshitsugu Miyazaki, Shimpei Morimoto, Shinji Nakaoka, Yoshiki Koizumi, Yusuke Asai, Kazuyuki Aihara, Koichi Watashi, Robin N Thompson, Kenji Shibuya, Katsuhito Fujiu, Alan S Perelson, Shingo Iwami, Takaji Wakita
Detection of significant antiviral drug effects on COVID-19 with reasonable sample sizes in randomized controlled trials: A modeling study. PLoS medicine 18 (7) (2021)
Kawang Su Kim, Keisuke Ejima, Shoya Iwanami, Yasuhisa Fujita, Hirofumi Ohashi, Yoshiki Koizumi, Yusuke Asai, Shinji Nakaoka, Koichi Watashi, Kazuyuki Aihara, Robin N Thompson, Ruian Ke, Alan S Perelson, Shingo Iwami
A quantitative model used to compare within-host SARS-CoV-2, MERS-CoV, and SARS-CoV dynamics provides insights into the pathogenesis and treatment of SARS-CoV-2. PLoS biology 19 (3) (2021)
Kawang Su Kim, Shoya Iwanami, Takafumi Oda, Yasuhisa Fujita, Keiji Kuba, Taiga Miyazaki, Keisuke Ejima, Shingo Iwami
Incomplete antiviral treatment may induce longer durations of viral shedding during SARS-CoV-2 infection. Life science alliance 4 (10) (2021)
Kawang Su Kim, Tatsunari Kondoh, Yusuke Asai, Ayato Takada, Shingo Iwami
Modeling the efficiency of filovirus entry into cells in vitro: Effects of SNP mutations in the receptor molecule. PLoS computational biology 16 (9) (2020)
Shoya Iwanami, Kosaku Kitagawa, Hirofumi Ohashi, Yusuke Asai, Kaho Shionoya, Wakana Saso, Kazane Nishioka, Hisashi Inaba, Shinji Nakaoka, Takaji Wakita, Odo Diekmann, Shingo Iwami, Koichi Watashi
Should a viral genome stay in the host cell or leave? A quantitative dynamics study of how hepatitis C virus deals with this dilemma. PLoS biology 18 (7) (2020)
Yusuke Nakano, Naoko Misawa, Guillermo Juarez-Fernandez, Miyu Moriwaki, Shinji Nakaoka, Takaaki Funo, Eri Yamada, Andrew Soper, Rokusuke Yoshikawa, Diako Ebrahimi, Yuuya Tachiki, Shingo Iwami, Reuben S Harris, Yoshio Koyanagi, Kei Sato
HIV-1 competition experiments in humanized mice show that APOBEC3H imposes selective pressure and promotes virus adaptation. PLoS pathogens 13 (5) (2017)