Shuangsang Fang

Publication Activity (10 Years)

Years Active: 2024-2024
Publications (10 Years): 20

Top Topics

Convolutional Neural Network

Top Venues

GigaByte (Hong Kong, China)

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Lei Cao, Chao Yang, Luni Hu, Wenjian Jiang, Yating Ren, Tianyi Xia, Mengyang Xu, Yishuai Ji, Mei Li, Xue Liu, Yuxiang Li, Yong Zhang, Shuangsang Fang
Deciphering spatial domains from spatially resolved transcriptomics with Siamese graph autoencoder. GigaScience 13 (1) (2024)
Bohan Zhang, Mei Li, Qiang Kang, Zhonghan Deng, Hua Qin, Kui Su, Xiuwen Feng, Lichuan Chen, Huanlin Liu, Shuangsang Fang, Yong Zhang, Yuxiang Li, Susanne B Pedersen, Xue Liu
Generating single-cell gene expression profiles for high-resolution spatial transcriptomics based on cell boundary images. GigaByte (Hong Kong, China) 2024 (2024)
Tongxuan Lv, Ying Zhang, Mei Li, Qiang Kang, Shuangsang Fang, Yong Zhang, Susanne B Pedersen, Xue Liu
EAGS: efficient and adaptive Gaussian smoothing applied to high-resolved spatial transcriptomics. GigaScience 13 (1) (2024)
Chao Zhang, Lin Liu, Ying Zhang, Mei Li, Shuangsang Fang, Qiang Kang, Ao Chen, Xue Liu, Yong Zhang, Yuxiang Li
spatiAlign: an unsupervised contrastive learning model for data integration of spatially resolved transcriptomics. GigaScience 13 (2024)
Chao Zhang, Qiang Kang, Mei Li, Hongqing Xie, Shuangsang Fang, Xue Liu
BatchEval Pipeline: batch effect evaluation workflow for multiple datasets joint analysis. GigaByte (Hong Kong, China) 2024 (2024)
Aleksandra Djordjevic, Junhua Li, Shuangsang Fang, Lei Cao, Marija Ivanovic
A novel variable neighborhood search approach for cell clustering for spatial transcriptomics. GigaByte (Hong Kong, China) 2024 (2024)
Aleksandra Djordjevic, Junhua Li, Shuangsang Fang, Lei Cao, Marija Ivanovic
A novel variable neighborhood search approach for cell clustering for spatial transcriptomics. GigaByte (Hong Kong, China) 2024 (2024)
Chao Zhang, Lin Liu, Ying Zhang, Mei Li, Shuangsang Fang, Qiang Kang, Ao Chen, Xue Liu, Yong Zhang, Yuxiang Li
spatiAlign: an unsupervised contrastive learning model for data integration of spatially resolved transcriptomics. GigaScience 13 (2024)
Tongxuan Lv, Ying Zhang, Mei Li, Qiang Kang, Shuangsang Fang, Yong Zhang, Susanne B Pedersen, Xue Liu
EAGS: efficient and adaptive Gaussian smoothing applied to high-resolved spatial transcriptomics. GigaScience 13 (1) (2024)
Chun Gong, Shengkang Li, Leying Wang, Fuxiang Zhao, Shuangsang Fang, Dong Yuan, Zijian Zhao, Qiqi He, Mei Li, Weiqing Liu, Zhaoxun Li, Hongqing Xie, Sha Liao, Ao Chen, Yong Zhang, Yuxiang Li, Xue Liu
SAW: an efficient and accurate data analysis workflow for Stereo-seq spatial transcriptomics. GigaByte (Hong Kong, China) 2024 (2024)
Lei Cao, Chao Yang, Luni Hu, Wenjian Jiang, Yating Ren, Tianyi Xia, Mengyang Xu, Yishuai Ji, Mei Li, Xue Liu, Yuxiang Li, Yong Zhang, Shuangsang Fang
Deciphering spatial domains from spatially resolved transcriptomics with Siamese graph autoencoder. GigaScience 13 (1) (2024)
Chao Zhang, Lin Liu, Ying Zhang, Mei Li, Shuangsang Fang, Qiang Kang, Ao Chen, Xue Liu, Yong Zhang, Yuxiang Li
spatiAlign: an unsupervised contrastive learning model for data integration of spatially resolved transcriptomics. GigaScience 13 (2024)
Tongxuan Lv, Ying Zhang, Mei Li, Qiang Kang, Shuangsang Fang, Yong Zhang, Susanne B Pedersen, Xue Liu
EAGS: efficient and adaptive Gaussian smoothing applied to high-resolved spatial transcriptomics. GigaScience 13 (1) (2024)
Chun Gong, Shengkang Li, Leying Wang, Fuxiang Zhao, Shuangsang Fang, Dong Yuan, Zijian Zhao, Qiqi He, Mei Li, Weiqing Liu, Zhaoxun Li, Hongqing Xie, Sha Liao, Ao Chen, Yong Zhang, Yuxiang Li, Xue Liu
SAW: an efficient and accurate data analysis workflow for Stereo-seq spatial transcriptomics. GigaByte (Hong Kong, China) 2024 (2024)
Tongxuan Lv, Ying Zhang, Mei Li, Qiang Kang, Shuangsang Fang, Yong Zhang, Susanne B Pedersen, Xue Liu
EAGS: efficient and adaptive Gaussian smoothing applied to high-resolved spatial transcriptomics. GigaScience 13 (1) (2024)
Tianyi Xia, Luni Hu, Lulu Zuo, Lei Cao, Yunjia Zhang, Mengyang Xu, Qin Lu, Lei Zhang, Taotao Pan, Bohan Zhang, Bowen Ma, Chuan Chen, Junfu Guo, Chang Shi, Mei Li, Chao Liu, Yuxiang Li, Yong Zhang, Shuangsang Fang
ST-GEARS: Advancing 3D downstream research through accurate spatial information recovery. Nature communications 15 (1) (2024)
Lei Cao, Chao Yang, Luni Hu, Wenjian Jiang, Yating Ren, Tianyi Xia, Mengyang Xu, Yishuai Ji, Mei Li, Xue Liu, Yuxiang Li, Yong Zhang, Shuangsang Fang
Deciphering spatial domains from spatially resolved transcriptomics with Siamese graph autoencoder. GigaScience 13 (1) (2024)
Bohan Zhang, Mei Li, Qiang Kang, Zhonghan Deng, Hua Qin, Kui Su, Xiuwen Feng, Lichuan Chen, Huanlin Liu, Shuangsang Fang, Yong Zhang, Yuxiang Li, Susanne B Pedersen, Xue Liu
Generating single-cell gene expression profiles for high-resolution spatial transcriptomics based on cell boundary images. GigaByte (Hong Kong, China) 2024 (2024)
Lei Cao, Chao Yang, Luni Hu, Wenjian Jiang, Yating Ren, Tianyi Xia, Mengyang Xu, Yishuai Ji, Mei Li, Xue Liu, Yuxiang Li, Yong Zhang, Shuangsang Fang
Deciphering spatial domains from spatially resolved transcriptomics with Siamese graph autoencoder. GigaScience 13 (1) (2024)
Chao Zhang, Qiang Kang, Mei Li, Hongqing Xie, Shuangsang Fang, Xue Liu
BatchEval Pipeline: batch effect evaluation workflow for multiple datasets joint analysis. GigaByte (Hong Kong, China) 2024 (2024)