Simon D'Oelsnitz (Simon d'Oelsnitz)

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 25

Top Topics

Escherichia Coli

Transcription Factor

Crystal Structure

Top Venues

Nature communications

ACS synthetic biology

Communications biology

Nature chemical biology

This page only lists publications with an associated author ORCID identifier.

Publications

Simon D'Oelsnitz, Joshua D Love, Andrew D Ellington, David Ross
Ligify: Automated Genome Mining for Ligand-Inducible Transcription Factors. ACS synthetic biology 13 (8) (2024)
Kevin B Reed, Sierra M Brooks, Jordan Wells, Kristin J Blake, Minye Zhao, Kira Placido, Simon D'Oelsnitz, Adit Trivedi, Shruti Gadhiyar, Hal S Alper
A modular and synthetic biosynthesis platform for de novo production of diverse halogenated tryptophan-derived molecules. Nature communications 15 (1) (2024)
Simon D'Oelsnitz, Sarah K Stofel, Joshua D Love, Andrew D Ellington
Snowprint: a predictive tool for genetic biosensor discovery. Communications biology 7 (1) (2024)
Kevin B Reed, Sierra M Brooks, Jordan Wells, Kristin J Blake, Minye Zhao, Kira Placido, Simon D'Oelsnitz, Adit Trivedi, Shruti Gadhiyar, Hal S Alper
Author Correction: A modular and synthetic biosynthesis platform for de novo production of diverse halogenated tryptophan-derived molecules. Nature communications 15 (1) (2024)
Simon D'Oelsnitz, Joshua D Love, Andrew D Ellington, David Ross
Ligify: Automated Genome Mining for Ligand-Inducible Transcription Factors. ACS synthetic biology 13 (8) (2024)
Kevin B Reed, Sierra M Brooks, Jordan Wells, Kristin J Blake, Minye Zhao, Kira Placido, Simon D'Oelsnitz, Adit Trivedi, Shruti Gadhiyar, Hal S Alper
A modular and synthetic biosynthesis platform for de novo production of diverse halogenated tryptophan-derived molecules. Nature communications 15 (1) (2024)
Simon D'Oelsnitz, Daniel J Diaz, Wantae Kim, Daniel J Acosta, Tyler L Dangerfield, Mason W Schechter, Matthew B Minus, James R Howard, Hannah Do, James M Loy, Hal S Alper, Yan Jessie Zhang, Andrew D Ellington
Biosensor and machine learning-aided engineering of an amaryllidaceae enzyme. Nature communications 15 (1) (2024)
Kevin B Reed, Sierra M Brooks, Jordan Wells, Kristin J Blake, Minye Zhao, Kira Placido, Simon D'Oelsnitz, Adit Trivedi, Shruti Gadhiyar, Hal S Alper
Author Correction: A modular and synthetic biosynthesis platform for de novo production of diverse halogenated tryptophan-derived molecules. Nature communications 15 (1) (2024)
Kevin B Reed, Sierra M Brooks, Jordan Wells, Kristin J Blake, Minye Zhao, Kira Placido, Simon D'Oelsnitz, Adit Trivedi, Shruti Gadhiyar, Hal S Alper
A modular and synthetic biosynthesis platform for de novo production of diverse halogenated tryptophan-derived molecules. Nature communications 15 (1) (2024)
Simon D'Oelsnitz, Sarah K Stofel, Joshua D Love, Andrew D Ellington
Snowprint: a predictive tool for genetic biosensor discovery. Communications biology 7 (1) (2024)
Simon D'Oelsnitz, Joshua D Love, Andrew D Ellington, David Ross
Ligify: Automated Genome Mining for Ligand-Inducible Transcription Factors. ACS synthetic biology 13 (8) (2024)
Simon D'Oelsnitz, Sarah K Stofel, Joshua D Love, Andrew D Ellington
Snowprint: a predictive tool for genetic biosensor discovery. Communications biology 7 (1) (2024)
Simon D'Oelsnitz, Daniel J Diaz, Wantae Kim, Daniel J Acosta, Tyler L Dangerfield, Mason W Schechter, Matthew B Minus, James R Howard, Hannah Do, James M Loy, Hal S Alper, Yan Jessie Zhang, Andrew D Ellington
Biosensor and machine learning-aided engineering of an amaryllidaceae enzyme. Nature communications 15 (1) (2024)
Kevin B Reed, Sierra M Brooks, Jordan Wells, Kristin J Blake, Minye Zhao, Kira Placido, Simon D'Oelsnitz, Adit Trivedi, Shruti Gadhiyar, Hal S Alper
A modular and synthetic biosynthesis platform for de novo production of diverse halogenated tryptophan-derived molecules. Nature communications 15 (1) (2024)
Simon D'Oelsnitz, Sarah K Stofel, Joshua D Love, Andrew D Ellington
Snowprint: a predictive tool for genetic biosensor discovery. Communications biology 7 (1) (2024)
Simon D'Oelsnitz, Sarah K Stofel, Joshua D Love, Andrew D Ellington
Snowprint: a predictive tool for genetic biosensor discovery. Communications biology 7 (1) (2024)
Simon D'Oelsnitz, Joshua D Love, Andrew D Ellington, David Ross
Ligify: Automated Genome Mining for Ligand-Inducible Transcription Factors. ACS synthetic biology (2024)
Kevin B Reed, Sierra M Brooks, Jordan Wells, Kristin J Blake, Minye Zhao, Kira Placido, Simon D'Oelsnitz, Adit Trivedi, Shruti Gadhiyar, Hal S Alper
A modular and synthetic biosynthesis platform for de novo production of diverse halogenated tryptophan-derived molecules. Nature communications 15 (1) (2024)
Kevin B Reed, Sierra M Brooks, Jordan Wells, Kristin J Blake, Minye Zhao, Kira Placido, Simon D'Oelsnitz, Adit Trivedi, Shruti Gadhiyar, Hal S Alper
A modular and synthetic biosynthesis platform for de novo production of diverse halogenated tryptophan-derived molecules. Nature communications 15 (1) (2024)
Simon D'Oelsnitz, Daniel J Diaz, Wantae Kim, Daniel J Acosta, Tyler L Dangerfield, Mason W Schechter, Matthew B Minus, James R Howard, Hannah Do, James M Loy, Hal S Alper, Yan Jessie Zhang, Andrew D Ellington
Biosensor and machine learning-aided engineering of an amaryllidaceae enzyme. Nature communications 15 (1) (2024)
Simon D'Oelsnitz, Daniel J Diaz, Wantae Kim, Daniel J Acosta, Tyler L Dangerfield, Mason W Schechter, Matthew B Minus, James R Howard, Hannah Do, James M Loy, Hal S Alper, Yan Jessie Zhang, Andrew D Ellington
Biosensor and machine learning-aided engineering of an amaryllidaceae enzyme. Nature communications 15 (1) (2024)
Simon D'Oelsnitz, Wantae Kim, Nathaniel T Burkholder, Kamyab Javanmardi, Ross Thyer, Yan Jessie Zhang, Hal S Alper, Andrew D Ellington
Using fungible biosensors to evolve improved alkaloid biosyntheses. Nature chemical biology 18 (9) (2022)
Emily K Bowman, James M Wagner, Shuo-Fu Yuan, Matthew Deaner, Claire M Palmer, Simon D'Oelsnitz, Lauren T Cordova, Xin Li, Frank F Craig, Hal S Alper
Sorting for secreted molecule production using a biosensor-in-microdroplet approach. Proceedings of the National Academy of Sciences of the United States of America 118 (36) (2022)
Simon D'Oelsnitz, Vylan Nguyen, Hal S Alper, Andrew D Ellington
Evolving a Generalist Biosensor for Bicyclic Monoterpenes. ACS synthetic biology 11 (1) (2022)
Simon D'Oelsnitz, Joshua D Love, Daniel J Diaz, Andrew D Ellington
GroovDB: A Database of Ligand-Inducible Transcription Factors. ACS synthetic biology 11 (10) (2022)