Stefan L Ameres

ResearcherID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 12

Top Venues

Institute of Molecular Biotechnology of the Austrian Academy of Sciences, IMBA

Max F Perutz Laboratories (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Institute of Molecular Biotechnology of the Austrian Academy of Sciences, IMBA Jan 10 2012

Austria

Groupleader

University of Massachusetts Medical School Department of Biochemistry and Molecular Pharmacology Oct 01 2007 - Oct 31 2011

United States

Postdoc

Max F Perutz Laboratories Jan 01 2007 - Oct 01 2007

Austria

Postdoc

Education History

Max F Perutz Laboratories Jan 01 2004 - Dec 22 2006

Austria

PHD

Friedrich Alexander Universität Erlangen-Nürnberg Naturwissenschaftliche Fakultät

Germany

MSC

Publications

Niko Popitsch, Tobias Neumann, Arndt von Haeseler, Stefan L Ameres
Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework. Genome biology 25 (1) (2024)
Ariane Mandlbauer, Qiong Sun, Niko Popitsch, Tanja A Schwickert, Miroslava Spanova, Jingkui Wang, Stefan L Ameres, Meinrad Busslinger, Luisa Cochella
Mime-seq 2.0: a method to sequence microRNAs from specific mouse cell types. The EMBO journal 43 (12) (2024)
Filip Nemčko, Moritz Himmelsbach, Vincent Loubiere, Ramesh Yelagandula, Michaela Pagani, Nina Fasching, Julius Brennecke, Ulrich Elling, Alexander Stark, Stefan L Ameres
Proteome-scale tagging and functional screening in mammalian cells by ORFtag. Nature methods (2024)
Ariane Mandlbauer, Qiong Sun, Niko Popitsch, Tanja A Schwickert, Miroslava Spanova, Jingkui Wang, Stefan L Ameres, Meinrad Busslinger, Luisa Cochella
Mime-seq 2.0: a method to sequence microRNAs from specific mouse cell types. The EMBO journal (2024)
Ariane Mandlbauer, Qiong Sun, Niko Popitsch, Tanja A Schwickert, Miroslava Spanova, Jingkui Wang, Stefan L Ameres, Meinrad Busslinger, Luisa Cochella
Mime-seq 2.0: a method to sequence microRNAs from specific mouse cell types. The EMBO journal 43 (12) (2024)
Ariane Mandlbauer, Qiong Sun, Niko Popitsch, Tanja A Schwickert, Miroslava Spanova, Jingkui Wang, Stefan L Ameres, Meinrad Busslinger, Luisa Cochella
Mime-seq 2.0: a method to sequence microRNAs from specific mouse cell types. The EMBO journal 43 (12) (2024)
Niko Popitsch, Tobias Neumann, Arndt von Haeseler, Stefan L Ameres
Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework. Genome biology 25 (1) (2024)
Wayo Matsushima, Veronika A Herzog, Tobias Neumann, Katharina Gapp, Johannes Zuber, Stefan L Ameres, Eric Alexander Miska
Sequencing cell-type-specific transcriptomes with SLAM-ITseq. Nature protocols 14 (8) (2019)
Matthias Muhar, Anja Ebert, Tobias Neumann, Christian Umkehrer, Julian Jude, Corinna Wieshofer, Philipp Rescheneder, Jesse J Lipp, Veronika A Herzog, Brian Reichholf, David A Cisneros, Thomas Hoffmann, Moritz F Schlapansky, Pooja Bhat, Arndt von Haeseler, Thomas Köcher, Anna C Obenauf, Johannes Popow, Stefan L Ameres, Johannes Zuber
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis. Science (New York, N.Y.) 360 (6390) (2018)
Wayo Matsushima, Veronika A Herzog, Tobias Neumann, Katharina Gapp, Johannes Zuber, Stefan L Ameres, Eric Alexander Miska
SLAM-ITseq: sequencing cell type-specific transcriptomes without cell sorting. Development (Cambridge, England) 145 (13) (2018)
Veronika A Herzog, Brian Reichholf, Tobias Neumann, Philipp Rescheneder, Pooja Bhat, Thomas R Burkard, Wiebke Wlotzka, Arndt von Haeseler, Johannes Zuber, Stefan L Ameres
Thiol-linked alkylation of RNA to assess expression dynamics. Nature methods 14 (12) (2017)
Madalena M Reimão-Pinto, Raphael A Manzenreither, Thomas R Burkard, Pawel Sledz, Martin Jinek, Karl Mechtler, Stefan L Ameres
Molecular basis for cytoplasmic RNA surveillance by uridylation-triggered decay in Drosophila. The EMBO journal 35 (22) (2016)

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Publication Activity (10 Years)

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Stefan L Ameres