Thomas E Ouldridge (T E Ouldridge, Thomas Ouldridge)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 16

Top Topics

Molecular Dynamics

Single Molecule

Crystal Structure

Top Venues

The Journal of chemical physics

Journal of the American Chemical Society

ACS synthetic biology

Proceedings of the National Academy of Sciences of the United States of America

This page only lists publications with an associated author ORCID identifier.

Publications

Francesca G Smith, John P Goertz, Križan Jurinović, Molly M Stevens, Thomas E Ouldridge
Strong sequence-dependence in RNA/DNA hybrid strand displacement kinetics. Nanoscale (2024)
Rakesh Mukherjee, Aditya Sengar, Javier Cabello-Garcia, Thomas E Ouldridge
Kinetic Proofreading Can Enhance Specificity in a Nonenzymatic DNA Strand Displacement Network. Journal of the American Chemical Society (2024)
Rakesh Mukherjee, Aditya Sengar, Javier Cabello-Garcia, Thomas E Ouldridge
Kinetic Proofreading Can Enhance Specificity in a Nonenzymatic DNA Strand Displacement Network. Journal of the American Chemical Society 146 (28) (2024)
Rakesh Mukherjee, Aditya Sengar, Javier Cabello-Garcia, Thomas E Ouldridge
Kinetic Proofreading Can Enhance Specificity in a Nonenzymatic DNA Strand Displacement Network. Journal of the American Chemical Society 146 (28) (2024)
Rakesh Mukherjee, Aditya Sengar, Javier Cabello-Garcia, Thomas E Ouldridge
Kinetic Proofreading Can Enhance Specificity in a Nonenzymatic DNA Strand Displacement Network. Journal of the American Chemical Society 146 (28) (2024)
Alicia Climent-Catala, Ivan Casas-Rodrigo, Suhasini Iyer, Rodrigo Ledesma-Amaro, Thomas E Ouldridge
Evaluating DFHBI-Responsive RNA Light-Up Aptamers as Fluorescent Reporters for Gene Expression. ACS synthetic biology (2023)
Benjamin Qureshi, Jordan Juritz, Jenny M Poulton, Adrian Beersing-Vasquez, Thomas E Ouldridge
A universal method for analyzing copolymer growth. The Journal of chemical physics 158 (10) (2023)
Joshua M Lawrence, Yutong Yin, Paolo Bombelli, Alberto Scarampi, Marko Storch, Laura T Wey, Alicia Climent-Catala, null null, Geoff S Baldwin, Danny O'Hare, Christopher J Howe, Jenny Z Zhang, Thomas E Ouldridge, Rodrigo Ledesma-Amaro
Synthetic biology and bioelectrochemical tools for electrogenetic system engineering. Science advances 8 (18) (2022)
Alicia Climent-Catala, Thomas E Ouldridge, Guy-Bart V Stan, Wooli Bae
Building an RNA-Based Toggle Switch Using Inhibitory RNA Aptamers. ACS synthetic biology 11 (2) (2022)
Hao Liu, Fan Hong, Francesca Smith, John Goertz, Thomas E Ouldridge, Molly M Stevens, Hao Yan, Petr Sulc
Kinetics of RNA and RNA:DNA Hybrid Strand Displacement. ACS synthetic biology 10 (11) (2021)
Natalie E C Haley, Thomas E Ouldridge, Ismael Mullor Ruiz, Alessandro Geraldini, Ard A Louis, Jonathan Bath, Andrew J Turberfield
Design of hidden thermodynamic driving for non-equilibrium systems via mismatch elimination during DNA strand displacement. Nature communications 11 (1) (2020)
Jenny M Poulton, Pieter Rein Ten Wolde, Thomas E Ouldridge
Nonequilibrium correlations in minimal dynamical models of polymer copying. Proceedings of the National Academy of Sciences of the United States of America 116 (6) (2019)
Ruslan L Davidchack, Thomas E Ouldridge, M V Tretyakov
Geometric integrator for Langevin systems with quaternion-based rotational degrees of freedom and hydrodynamic interactions. The Journal of chemical physics 147 (22) (2018)
Pedro Fonseca, Flavio Romano, John S Schreck, Thomas E Ouldridge, Jonathan P K Doye, Ard A Louis
Multi-scale coarse-graining for the study of assembly pathways in DNA-brick self-assembly. The Journal of chemical physics 148 (13) (2018)
Adithya Vijaykumar, Thomas E Ouldridge, Pieter Rein Ten Wolde, Peter G Bolhuis
Multiscale simulations of anisotropic particles combining molecular dynamics and Green's function reaction dynamics. The Journal of chemical physics 146 (11) (2018)
Thomas E Ouldridge
The importance of thermodynamics for molecular systems, and the importance of molecular systems for thermodynamics. Natural computing 17 (1) (2017)