Avi Srivastava

Publication Activity (10 Years)

Years Active: 2021-2022
Publications (10 Years): 4

Top Topics

High Throughput

Dna Methylation

Antibiotic Resistance Genes

Top Venues

Nature biotechnology

PLoS computational biology

Bioinformatics (Oxford, England)

This page only lists publications with an associated author ORCID identifier.

Publications

Bingjie Zhang, Avi Srivastava, Eleni P Mimitou, Tim Stuart, Ivan Raimondi, Yuhan Hao, Peter Smibert, Rahul Satija
Characterizing cellular heterogeneity in chromatin state with scCUT&Tag-pro. Nature biotechnology 40 (8) (2022)
Dongze He, Mohsen Zakeri, Hirak Sarkar, Charlotte Soneson, Avi Srivastava, Rob Patro
Alevin-fry unlocks rapid, accurate and memory-frugal quantification of single-cell RNA-seq data. Nature methods 19 (3) (2022)
Wancen Mu, Hirak Sarkar, Avi Srivastava, Kwangbom Choi, Rob Patro, Michael I Love
Airpart: interpretable statistical models for analyzing allelic imbalance in single-cell datasets. Bioinformatics (Oxford, England) 38 (10) (2022)
Charlotte Soneson, Avi Srivastava, Rob Patro, Michael B Stadler
Preprocessing choices affect RNA velocity results for droplet scRNA-seq data. PLoS computational biology 17 (1) (2021)