Xinsong Chen

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 20

Top Topics

Dna Methylation

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

Nature communications

Bioinformatics (Oxford, England)

Science translational medicine

This page only lists publications with an associated author ORCID identifier.

Publications

Semih Kurt, Mandi Chen, Hosein Toosi, Xinsong Chen, Camilla Engblom, Jeff Mold, Johan Hartman, Jens Lagergren
CopyVAE: a variational autoencoder-based approach for copy number variation inference using single-cell transcriptomics. Bioinformatics (Oxford, England) 40 (5) (2024)
Semih Kurt, Mandi Chen, Hosein Toosi, Xinsong Chen, Camilla Engblom, Jeff Mold, Johan Hartman, Jens Lagergren
CopyVAE: a variational autoencoder-based approach for copy number variation inference using single-cell transcriptomics. Bioinformatics (Oxford, England) 40 (5) (2024)
Semih Kurt, Mandi Chen, Hosein Toosi, Xinsong Chen, Camilla Engblom, Jeff Mold, Johan Hartman, Jens Lagergren
CopyVAE: a variational autoencoder-based approach for copy number variation inference using single-cell transcriptomics. Bioinformatics (Oxford, England) 40 (5) (2024)
Shi Yong Neo, Le Tong, Joni Chong, Yaxuan Liu, Xu Jing, Mariana M S Oliveira, Yi Chen, Ziqing Chen, Keene Lee, Nutsa Burduli, Xinsong Chen, Juan Gao, Ran Ma, Jia Pei Lim, Jianxin Huo, Shengli Xu, Evren Alici, Stina Linnea Wickström, Felix Haglund, Johan Hartman, Arnika Kathleen Wagner, Yihai Cao, Rolf Kiessling, Kong Peng Lam, Lisa S Westerberg, Andreas Lundqvist
Tumor-associated NK cells drive MDSC-mediated tumor immune tolerance through the IL-6/STAT3 axis. Science translational medicine 16 (747) (2024)
Shi Yong Neo, Le Tong, Joni Chong, Yaxuan Liu, Xu Jing, Mariana M S Oliveira, Yi Chen, Ziqing Chen, Keene Lee, Nutsa Burduli, Xinsong Chen, Juan Gao, Ran Ma, Jia Pei Lim, Jianxin Huo, Shengli Xu, Evren Alici, Stina Linnea Wickström, Felix Haglund, Johan Hartman, Arnika Kathleen Wagner, Yihai Cao, Rolf Kiessling, Kong Peng Lam, Lisa S Westerberg, Andreas Lundqvist
Tumor-associated NK cells drive MDSC-mediated tumor immune tolerance through the IL-6/STAT3 axis. Science translational medicine 16 (747) (2024)
Seong-Hwan Jun, Hosein Toosi, Jeff Mold, Camilla Engblom, Xinsong Chen, Ciara O'Flanagan, Michael Hagemann-Jensen, Rickard Sandberg, Samuel A J R Aparicio, Johan Hartman, Andrew J Roth, Jens Lagergren
Reconstructing clonal tree for phylo-phenotypic characterization of cancer using single-cell transcriptomics. Nature communications 14 (1) (2023)
Caterina Collodet, Kelly Blust, Savvini Gkouma, Emmy Ståhl, Xinsong Chen, Johan Hartman, My Hedhammar
Development and characterization of a recombinant silk network for 3D culture of immortalized and fresh tumor-derived breast cancer cells. Bioengineering & translational medicine 8 (5) (2023)
Seong-Hwan Jun, Hosein Toosi, Jeff Mold, Camilla Engblom, Xinsong Chen, Ciara O'Flanagan, Michael Hagemann-Jensen, Rickard Sandberg, Samuel A J R Aparicio, Johan Hartman, Andrew J Roth, Jens Lagergren
Reconstructing clonal tree for phylo-phenotypic characterization of cancer using single-cell transcriptomics. Nature communications 14 (1) (2023)
Le Tong, Veronika Kremer, Shi Yong Neo, Yaxuan Liu, Yi Chen, Arnika Kathleen Wagner, Ying Yang, Ziqing Chen, Christina Seitz, Nicholas Patrick Tobin, Maarten Alexander Ligtenberg, Evren Alici, Xinsong Chen, Felix Haglund, Barbara Seliger, Ulrika Harmenberg, Eugenia Colón, Ann-Helén Scherman Plogell, Lisa Lei Liu, Andreas Lundqvist
Renal cell carcinoma escapes NK cell-mediated immune surveillance through the downregulation of DNAM-1. Cancer communications (London, England) (2023)
Seong-Hwan Jun, Hosein Toosi, Jeff Mold, Camilla Engblom, Xinsong Chen, Ciara O'Flanagan, Michael Hagemann-Jensen, Rickard Sandberg, Samuel A J R Aparicio, Johan Hartman, Andrew J Roth, Jens Lagergren
Reconstructing clonal tree for phylo-phenotypic characterization of cancer using single-cell transcriptomics. Nature communications 14 (1) (2023)
Enric Llorens-Bobadilla, Margherita Zamboni, Maja Marklund, Nayanika Bhalla, Xinsong Chen, Johan Hartman, Jonas Frisén, Patrik L Ståhl
Solid-phase capture and profiling of open chromatin by spatial ATAC. Nature biotechnology (2023)
Camilla Engblom, Kim Thrane, Qirong Lin, Alma Andersson, Hosein Toosi, Xinsong Chen, Embla Steiner, Chang Lu, Giulia Mantovani, Michael Hagemann-Jensen, Sami Saarenpää, Mattias Jangard, Julio Saez-Rodriguez, Jakob Michaëlsson, Johan Hartman, Jens Lagergren, Jeff E Mold, Joakim Lundeberg, Jonas Frisén
Spatial transcriptomics of B cell and T cell receptors reveals lymphocyte clonal dynamics. Science (New York, N.Y.) 382 (6675) (2023)
Seong-Hwan Jun, Hosein Toosi, Jeff Mold, Camilla Engblom, Xinsong Chen, Ciara O'Flanagan, Michael Hagemann-Jensen, Rickard Sandberg, Samuel A J R Aparicio, Johan Hartman, Andrew J Roth, Jens Lagergren
Reconstructing clonal tree for phylo-phenotypic characterization of cancer using single-cell transcriptomics. Nature communications 14 (1) (2023)
Apple Hui Min Tay, Rubén Prieto-Díaz, Shiyong Neo, Le Tong, Xinsong Chen, Valentina Carannante, Björn Önfelt, Johan Hartman, Felix Haglund, Maria Majellaro, Jhonny Azuaje, Xerardo Garcia-Mera, Jose M Brea, Maria I Loza, Willem Jespers, Hugo Gutiérrez-de-Terán, Eddy Sotelo, Andreas Lundqvist
A 2B adenosine receptor antagonists rescue lymphocyte activity in adenosine-producing patient-derived cancer models. Journal for immunotherapy of cancer 10 (5) (2022)
Xinsong Chen, Emmanouil G Sifakis, Stephanie Robertson, Shi Yong Neo, Seong-Hwan Jun, Le Tong, Apple Hui Min Tay, John Lövrot, Roxanna J Hellgren, Sara Margolin, Jonas Bergh, Theodoros Foukakis, Jens Lagergren, Andreas Lundqvist, Ran Ma, Johan Hartman
Breast cancer patient-derived whole-tumor cell culture model for efficient drug profiling and treatment response prediction. Proceedings of the National Academy of Sciences of the United States of America 120 (1) (2022)
Xinsong Chen, Emmanouil G Sifakis, Stephanie Robertson, Shi Yong Neo, Seong-Hwan Jun, Le Tong, Apple Hui Min Tay, John Lövrot, Roxanna J Hellgren, Sara Margolin, Jonas Bergh, Theodoros Foukakis, Jens Lagergren, Andreas Lundqvist, Ran Ma, Johan Hartman
Breast cancer patient-derived whole-tumor cell culture model for efficient drug profiling and treatment response prediction. Proceedings of the National Academy of Sciences of the United States of America 120 (1) (2022)
Xinsong Chen, Emmanouil G Sifakis, Stephanie Robertson, Shi Yong Neo, Seong-Hwan Jun, Le Tong, Apple Hui Min Tay, John Lövrot, Roxanna J Hellgren, Sara Margolin, Jonas Bergh, Theodoros Foukakis, Jens Lagergren, Andreas Lundqvist, Ran Ma, Johan Hartman
Breast cancer patient-derived whole-tumor cell culture model for efficient drug profiling and treatment response prediction. Proceedings of the National Academy of Sciences of the United States of America 120 (1) (2022)
Xinsong Chen, Emmanouil G Sifakis, Stephanie Robertson, Shi Yong Neo, Seong-Hwan Jun, Le Tong, Apple Hui Min Tay, John Lövrot, Roxanna J Hellgren, Sara Margolin, Jonas Bergh, Theodoros Foukakis, Jens Lagergren, Andreas Lundqvist, Ran Ma, Johan Hartman
Breast cancer patient-derived whole-tumor cell culture model for efficient drug profiling and treatment response prediction. Proceedings of the National Academy of Sciences of the United States of America 120 (1) (2022)
Xinsong Chen, Emmanouil G Sifakis, Stephanie Robertson, Shi Yong Neo, Seong-Hwan Jun, Le Tong, Apple Hui Min Tay, John Lövrot, Roxanna J Hellgren, Sara Margolin, Jonas Bergh, Theodoros Foukakis, Jens Lagergren, Andreas Lundqvist, Ran Ma, Johan Hartman
Breast cancer patient-derived whole-tumor cell culture model for efficient drug profiling and treatment response prediction. Proceedings of the National Academy of Sciences of the United States of America 120 (1) (2022)
Linnea Hases, Ahmed Ibrahim, Xinsong Chen, Yanghong Liu, Johan Hartman, Cecilia Williams
The Importance of Sex in the Discovery of Colorectal Cancer Prognostic Biomarkers. International journal of molecular sciences 22 (3) (2021)