Michael Hagemann-Jensen

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 20

Top Venues

Nature immunology

Nature communications

Nature biotechnology

Nature protocols

Karolinska Institutet

Karolinska Institutet (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Karolinska Institutet May 01 2018

Sweden

Post Doctoral Researcher :: Department of Cell and Molecular Biology, SandbergLab

Karolinska Institutet

Sweden

Researcher :: Ludwig institute for Cancer Research & Department of Cellular and Molecular Biology

Karolinska Institutet Mar 19 2013

Sweden

PhD Student :: Department of Medicine Solna & Center for Molecular Medicine, Respiratory Medicine Unit

Karolinska Institutet

Sweden

Research Assistant :: Department of Medicine Solna & Center for Molecular Medicine, Respiratory Medicine Unit

University of Copenhagen

Denmark

Research Assistant :: Department of Veterinary Disease Biology, LIFE

University of Copenhagen

Denmark

Master Student :: Department of Veterinary Disease Biology, LIFE

University of Copenhagen/Statens Serum Institute

Denmark

Bachelor Student :: Department of International health, Immunology and Microbiology/Clinical Biochemical Immunology Department

Education History

Karolinska Institutet Mar 19 2013 - Mar 23 2018

Sweden

PHD :: Department of Medicine, Solna & Center for Molecular Medicine

University of Copenhagen

Denmark

MSC

University of Copenhagen

Denmark

BSC

Publications

Joana Carrelha, Stefania Mazzi, Axel Winroth, Michael Hagemann-Jensen, Christoph Ziegenhain, Kari Högstrand, Masafumi Seki, Margs S Brennan, Madeleine Lehander, Bishan Wu, Yiran Meng, Ellen Markljung, Ruggiero Norfo, Hisashi Ishida, Karin Belander Strålin, Francesca Grasso, Christina Simoglou Karali, Affaf Aliouat, Amy Hillen, Edwin Chari, Kimberly Siletti, Supat Thongjuea, Adam J Mead, Sten Linnarsson, Claus Nerlov, Rickard Sandberg, Tetsuichi Yoshizato, Petter S Woll, Sten Eirik W Jacobsen
Alternative platelet differentiation pathways initiated by nonhierarchically related hematopoietic stem cells. Nature immunology (2024)
Daniel Ramsköld, Gert-Jan Hendriks, Anton J M Larsson, Juliane V Mayr, Christoph Ziegenhain, Michael Hagemann-Jensen, Leonard Hartmanis, Rickard Sandberg
Single-cell new RNA sequencing reveals principles of transcription at the resolution of individual bursts. Nature cell biology (2024)
Joana Carrelha, Stefania Mazzi, Axel Winroth, Michael Hagemann-Jensen, Christoph Ziegenhain, Kari Högstrand, Masafumi Seki, Margs S Brennan, Madeleine Lehander, Bishan Wu, Yiran Meng, Ellen Markljung, Ruggiero Norfo, Hisashi Ishida, Karin Belander Strålin, Francesca Grasso, Christina Simoglou Karali, Affaf Aliouat, Amy Hillen, Edwin Chari, Kimberly Siletti, Supat Thongjuea, Adam J Mead, Sten Linnarsson, Claus Nerlov, Rickard Sandberg, Tetsuichi Yoshizato, Petter S Woll, Sten Eirik W Jacobsen
Alternative platelet differentiation pathways initiated by nonhierarchically related hematopoietic stem cells. Nature immunology 25 (6) (2024)
Joana Carrelha, Stefania Mazzi, Axel Winroth, Michael Hagemann-Jensen, Christoph Ziegenhain, Kari Högstrand, Masafumi Seki, Margs S Brennan, Madeleine Lehander, Bishan Wu, Yiran Meng, Ellen Markljung, Ruggiero Norfo, Hisashi Ishida, Karin Belander Strålin, Francesca Grasso, Christina Simoglou Karali, Affaf Aliouat, Amy Hillen, Edwin Chari, Kimberly Siletti, Supat Thongjuea, Adam J Mead, Sten Linnarsson, Claus Nerlov, Rickard Sandberg, Tetsuichi Yoshizato, Petter S Woll, Sten Eirik W Jacobsen
Alternative platelet differentiation pathways initiated by nonhierarchically related hematopoietic stem cells. Nature immunology 25 (6) (2024)
Joana Carrelha, Stefania Mazzi, Axel Winroth, Michael Hagemann-Jensen, Christoph Ziegenhain, Kari Högstrand, Masafumi Seki, Margs S Brennan, Madeleine Lehander, Bishan Wu, Yiran Meng, Ellen Markljung, Ruggiero Norfo, Hisashi Ishida, Karin Belander Strålin, Francesca Grasso, Christina Simoglou Karali, Affaf Aliouat, Amy Hillen, Edwin Chari, Kimberly Siletti, Supat Thongjuea, Adam J Mead, Sten Linnarsson, Claus Nerlov, Rickard Sandberg, Tetsuichi Yoshizato, Petter S Woll, Sten Eirik W Jacobsen
Alternative platelet differentiation pathways initiated by nonhierarchically related hematopoietic stem cells. Nature immunology 25 (6) (2024)
Joana Carrelha, Stefania Mazzi, Axel Winroth, Michael Hagemann-Jensen, Christoph Ziegenhain, Kari Högstrand, Masafumi Seki, Margs S Brennan, Madeleine Lehander, Bishan Wu, Yiran Meng, Ellen Markljung, Ruggiero Norfo, Hisashi Ishida, Karin Belander Strålin, Francesca Grasso, Christina Simoglou Karali, Affaf Aliouat, Amy Hillen, Edwin Chari, Kimberly Siletti, Supat Thongjuea, Adam J Mead, Sten Linnarsson, Claus Nerlov, Rickard Sandberg, Tetsuichi Yoshizato, Petter S Woll, Sten Eirik W Jacobsen
Alternative platelet differentiation pathways initiated by nonhierarchically related hematopoietic stem cells. Nature immunology 25 (6) (2024)
Joana Carrelha, Stefania Mazzi, Axel Winroth, Michael Hagemann-Jensen, Christoph Ziegenhain, Kari Högstrand, Masafumi Seki, Margs S Brennan, Madeleine Lehander, Bishan Wu, Yiran Meng, Ellen Markljung, Ruggiero Norfo, Hisashi Ishida, Karin Belander Strålin, Francesca Grasso, Christina Simoglou Karali, Affaf Aliouat, Amy Hillen, Edwin Chari, Kimberly Siletti, Supat Thongjuea, Adam J Mead, Sten Linnarsson, Claus Nerlov, Rickard Sandberg, Tetsuichi Yoshizato, Petter S Woll, Sten Eirik W Jacobsen
Alternative platelet differentiation pathways initiated by nonhierarchically related hematopoietic stem cells. Nature immunology 25 (6) (2024)
Seong-Hwan Jun, Hosein Toosi, Jeff Mold, Camilla Engblom, Xinsong Chen, Ciara O'Flanagan, Michael Hagemann-Jensen, Rickard Sandberg, Samuel A J R Aparicio, Johan Hartman, Andrew J Roth, Jens Lagergren
Reconstructing clonal tree for phylo-phenotypic characterization of cancer using single-cell transcriptomics. Nature communications 14 (1) (2023)
Seong-Hwan Jun, Hosein Toosi, Jeff Mold, Camilla Engblom, Xinsong Chen, Ciara O'Flanagan, Michael Hagemann-Jensen, Rickard Sandberg, Samuel A J R Aparicio, Johan Hartman, Andrew J Roth, Jens Lagergren
Reconstructing clonal tree for phylo-phenotypic characterization of cancer using single-cell transcriptomics. Nature communications 14 (1) (2023)
Pedro Luis Moura, Teresa Mortera Blanco, Isabel Juliana Hofman, Gabriele Todisco, Warren W Kretzschmar, Ann-Charlotte Björklund, Maria Creignou, Michael Hagemann-Jensen, Christoph Ziegenhain, David Cabrerizo Granados, Indira Barbosa, Gunilla Walldin, Monika Jansson, Neil Ashley, Adam J Mead, Vanessa Lundin, Marios Dimitriou, Tetsuichi Yoshizato, Petter S Woll, Seishi Ogawa, Rickard Sandberg, Sten Eirik W Jacobsen, Eva Hellström Lindberg
Erythroid differentiation enhances RNA mis-splicing in SF3B1-mutant myelodysplastic syndromes with ring sideroblasts. Cancer research (2023)
Seong-Hwan Jun, Hosein Toosi, Jeff Mold, Camilla Engblom, Xinsong Chen, Ciara O'Flanagan, Michael Hagemann-Jensen, Rickard Sandberg, Samuel A J R Aparicio, Johan Hartman, Andrew J Roth, Jens Lagergren
Reconstructing clonal tree for phylo-phenotypic characterization of cancer using single-cell transcriptomics. Nature communications 14 (1) (2023)
Camilla Engblom, Kim Thrane, Qirong Lin, Alma Andersson, Hosein Toosi, Xinsong Chen, Embla Steiner, Chang Lu, Giulia Mantovani, Michael Hagemann-Jensen, Sami Saarenpää, Mattias Jangard, Julio Saez-Rodriguez, Jakob Michaëlsson, Johan Hartman, Jens Lagergren, Jeff E Mold, Joakim Lundeberg, Jonas Frisén
Spatial transcriptomics of B cell and T cell receptors reveals lymphocyte clonal dynamics. Science (New York, N.Y.) 382 (6675) (2023)
Seong-Hwan Jun, Hosein Toosi, Jeff Mold, Camilla Engblom, Xinsong Chen, Ciara O'Flanagan, Michael Hagemann-Jensen, Rickard Sandberg, Samuel A J R Aparicio, Johan Hartman, Andrew J Roth, Jens Lagergren
Reconstructing clonal tree for phylo-phenotypic characterization of cancer using single-cell transcriptomics. Nature communications 14 (1) (2023)
Michael Hagemann-Jensen, Christoph Ziegenhain, Rickard Sandberg
Scalable single-cell RNA sequencing from full transcripts with Smart-seq3xpress. Nature biotechnology 40 (10) (2022)
Christoph Ziegenhain, Gert-Jan Hendriks, Michael Hagemann-Jensen, Rickard Sandberg
Molecular spikes: a gold standard for single-cell RNA counting. Nature methods 19 (5) (2022)
Anton J M Larsson, Christoph Ziegenhain, Michael Hagemann-Jensen, Björn Reinius, Tina Jacob, Tim Dalessandri, Gert-Jan Hendriks, Maria Kasper, Rickard Sandberg
Transcriptional bursts explain autosomal random monoallelic expression and affect allelic imbalance. PLoS computational biology 17 (3) (2021)
Mikael V Ringh, Michael Hagemann-Jensen, Maria Needhamsen, Susanna Kullberg, Jan Wahlström, Johan Grunewald, Boel Brynedal, Maja Jagodic, Tomas J Ekström, Johan Öckinger, Lara Kular
Methylome and transcriptome signature of bronchoalveolar cells from multiple sclerosis patients in relation to smoking. Multiple sclerosis (Houndmills, Basingstoke, England) 27 (7) (2020)
Michael Hagemann-Jensen, Christoph Ziegenhain, Ping Chen, Daniel Ramsköld, Gert-Jan Hendriks, Anton J M Larsson, Omid R Faridani, Rickard Sandberg
Single-cell RNA counting at allele and isoform resolution using Smart-seq3. Nature biotechnology 38 (6) (2020)
Michael Hagemann-Jensen, Ilgar Abdullayev, Rickard Sandberg, Omid R Faridani
Small-seq for single-cell small-RNA sequencing. Nature protocols 13 (10) (2019)
Natalia V Rivera, Michael Hagemann-Jensen, Manuel A R Ferreira, Susanna Kullberg, Anders Eklund, Nicholas G Martin, Leonid Padyukov, Johan Grunewald
Common variants of T-cells contribute differently to phenotypic variation in sarcoidosis. Scientific reports 7 (1) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Michael Hagemann-Jensen