Xu Zhang

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 28

Top Venues

Journal of proteome research

Gut microbes

Analytical chemistry

Nature communications

University of Ottawa

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Ottawa Oct 01 2013

Canada

Research associate :: Department of Biochemistry, Microbiology and Immunology

Publications

Emily E F Brown, Angela Wang, Marybeth Creskey, Sarah E Cummings, Jessie R Lavoie, Zhibin Ning, Jianjun Li, Daniel Figeys, Rui Chen, Xu Zhang
Multilevel Proteomic Profiling of Colorectal Adenocarcinoma Caco-2 Cell Differentiation to Characterize an Intestinal Epithelial Model. Journal of proteome research 23 (7) (2024)
Emily E F Brown, Angela Wang, Marybeth Creskey, Sarah E Cummings, Jessie R Lavoie, Zhibin Ning, Jianjun Li, Daniel Figeys, Rui Chen, Xu Zhang
Multilevel Proteomic Profiling of Colorectal Adenocarcinoma Caco-2 Cell Differentiation to Characterize an Intestinal Epithelial Model. Journal of proteome research 23 (7) (2024)
Emily E F Brown, Angela Wang, Marybeth Creskey, Sarah E Cummings, Jessie R Lavoie, Zhibin Ning, Jianjun Li, Daniel Figeys, Rui Chen, Xu Zhang
Multilevel Proteomic Profiling of Colorectal Adenocarcinoma Caco-2 Cell Differentiation to Characterize an Intestinal Epithelial Model. Journal of proteome research (2024)
Emily E F Brown, Angela Wang, Marybeth Creskey, Sarah E Cummings, Jessie R Lavoie, Zhibin Ning, Jianjun Li, Daniel Figeys, Rui Chen, Xu Zhang
Multilevel Proteomic Profiling of Colorectal Adenocarcinoma Caco-2 Cell Differentiation to Characterize an Intestinal Epithelial Model. Journal of proteome research 23 (7) (2024)
Emily E F Brown, Daniel Figeys, Xu Zhang
Microbiota-directed biotherapeutics: considerations for quality and functional assessment. Gut microbes 15 (1) (2023)
Emily E F Brown, Daniel Figeys, Xu Zhang
Microbiota-directed biotherapeutics: considerations for quality and functional assessment. Gut microbes 15 (1) (2023)
Leyuan Li, Tong Wang, Zhibin Ning, Xu Zhang, James Butcher, Joeselle M Serrana, Caitlin M A Simopoulos, Janice Mayne, Alain Stintzi, David R Mack, Yang-Yu Liu, Daniel Figeys
Revealing proteome-level functional redundancy in the human gut microbiome using ultra-deep metaproteomics. Nature communications 14 (1) (2023)
Emily E F Brown, Daniel Figeys, Xu Zhang
Microbiota-directed biotherapeutics: considerations for quality and functional assessment. Gut microbes 15 (1) (2023)
Kai Cheng, Zhibin Ning, Leyuan Li, Xu Zhang, Joeselle M Serrana, Janice Mayne, Daniel Figeys
MetaLab-MAG: A Metaproteomic Data Analysis Platform for Genome-Level Characterization of Microbiomes from the Metagenome-Assembled Genomes Database. Journal of proteome research 22 (2) (2022)
Kai Cheng, Zhibin Ning, Leyuan Li, Xu Zhang, Joeselle M Serrana, Janice Mayne, Daniel Figeys
MetaLab-MAG: A Metaproteomic Data Analysis Platform for Genome-Level Characterization of Microbiomes from the Metagenome-Assembled Genomes Database. Journal of proteome research 22 (2) (2022)
Kai Cheng, Zhibin Ning, Leyuan Li, Xu Zhang, Joeselle M Serrana, Janice Mayne, Daniel Figeys
MetaLab-MAG: A Metaproteomic Data Analysis Platform for Genome-Level Characterization of Microbiomes from the Metagenome-Assembled Genomes Database. Journal of proteome research (2022)
Marybeth Creskey, Leyuan Li, Zhibin Ning, Emily E F Brown, Janice Mayne, Krystal Walker, Anna Ampaw, Robert Ben, Xu Zhang, Daniel Figeys
An economic and robust TMT labeling approach for high throughput proteomic and metaproteomic analysis. Proteomics (2022)
Kai Cheng, Zhibin Ning, Leyuan Li, Xu Zhang, Joeselle M Serrana, Janice Mayne, Daniel Figeys
MetaLab-MAG: A Metaproteomic Data Analysis Platform for Genome-Level Characterization of Microbiomes from the Metagenome-Assembled Genomes Database. Journal of proteome research 22 (2) (2022)
Kai Cheng, Zhibin Ning, Leyuan Li, Xu Zhang, Joeselle M Serrana, Janice Mayne, Daniel Figeys
MetaLab-MAG: A Metaproteomic Data Analysis Platform for Genome-Level Characterization of Microbiomes from the Metagenome-Assembled Genomes Database. Journal of proteome research 22 (2) (2022)
Xu Zhang, Krystal Walker, Janice Mayne, Leyuan Li, Zhibin Ning, Alain Stintzi, Daniel Figeys
Evaluating live microbiota biobanking using an ex vivo microbiome assay and metaproteomics. Gut microbes 14 (1) (2022)
Kai Cheng, Zhibin Ning, Leyuan Li, Xu Zhang, Joeselle M Serrana, Janice Mayne, Daniel Figeys
MetaLab-MAG: A Metaproteomic Data Analysis Platform for Genome-Level Characterization of Microbiomes from the Metagenome-Assembled Genomes Database. Journal of proteome research 22 (2) (2022)
Janice Mayne, Xu Zhang, James Butcher, Krystal Walker, Zhibin Ning, Ewelina Wójcik, Jarosław Dastych, Alain Stintzi, Daniel Figeys
Examining the Effects of an Anti-Salmonella Bacteriophage Preparation, BAFASAL®, on Ex-Vivo Human Gut Microbiome Composition and Function Using a Multi-Omics Approach. Viruses 13 (9) (2021)
Xu Zhang, Kai Cheng, Zhibin Ning, Janice Mayne, Krystal Walker, Hao Chi, Charles L Farnsworth, Kimberly Lee, Daniel Figeys
Exploring the Microbiome-Wide Lysine Acetylation, Succinylation, and Propionylation in Human Gut Microbiota. Analytical chemistry 93 (17) (2021)
Leyuan Li, Lu Chang, Xu Zhang, Zhibin Ning, Janice Mayne, Yang Ye, Alain Stintzi, Jia Liu, Daniel Figeys
Berberine and its structural analogs have differing effects on functional profiles of individual gut microbiomes. Gut microbes 11 (5) (2020)
Zikai Hao, Leyuan Li, Zhibin Ning, Xu Zhang, Janice Mayne, Kai Cheng, Krystal Walker, Hong Liu, Daniel Figeys
Metaproteomics Reveals Growth Phase-Dependent Responses of an In Vitro Gut Microbiota to Metformin. Journal of the American Society for Mass Spectrometry 31 (7) (2020)
Jiaqin Wang, Xu Zhang, Leyuan Li, Zhibin Ning, Janice Mayne, Cian Schmitt-Ulms, Krystal Walker, Kai Cheng, Daniel Figeys
Differential Lysis Approach Enables Selective Extraction of Taxon-Specific Proteins for Gut Metaproteomics. Analytical chemistry 92 (7) (2020)
Patrick Smyth, Xu Zhang, Zhibin Ning, Janice Mayne, Jasmine Isabelle Moore, Krystal Walker, Mathieu Lavallée-Adam, Daniel Figeys
Studying the Temporal Dynamics of the Gut Microbiota Using Metabolic Stable Isotope Labeling and Metaproteomics. Analytical chemistry 92 (24) (2020)
Kai Cheng, Zhibin Ning, Xu Zhang, Leyuan Li, Bo Liao, Janice Mayne, Daniel Figeys
MetaLab 2.0 Enables Accurate Post-Translational Modifications Profiling in Metaproteomics. Journal of the American Society for Mass Spectrometry 31 (7) (2020)
Xu Zhang, Zhibin Ning, Janice Mayne, Yidai Yang, Shelley A Deeke, Krystal Walker, Charles L Farnsworth, Matthew P Stokes, Jean-François Couture, David Mack, Alain Stintzi, Daniel Figeys
Widespread protein lysine acetylation in gut microbiome and its alterations in patients with Crohn's disease. Nature communications 11 (1) (2020)
Xu Zhang, Daniel Figeys
Perspective and Guidelines for Metaproteomics in Microbiome Studies. Journal of proteome research 18 (6) (2019)
Leyuan Li, Elias Abou-Samra, Zhibin Ning, Xu Zhang, Janice Mayne, Janet Wang, Kai Cheng, Krystal Walker, Alain Stintzi, Daniel Figeys
An in vitro model maintaining taxon-specific functional activities of the gut microbiome. Nature communications 10 (1) (2019)
Henghui Li, Leyuan Li, Kai Cheng, Zhibin Ning, Janice Mayne, Xu Zhang, Krystal Walker, Rui Chen, Susan Twine, Jianjun Li, Daniel Figeys
Chemoenzymatic Method for Glycoproteomic N-Glycan Type Quantitation. Analytical chemistry 92 (1) (2019)
Xu Zhang, Shelley A Deeke, Zhibin Ning, Amanda E Starr, James Butcher, Jennifer Li, Janice Mayne, Kai Cheng, Bo Liao, Leyuan Li, Ruth Singleton, David Mack, Alain Stintzi, Daniel Figeys
Metaproteomics reveals associations between microbiome and intestinal extracellular vesicle proteins in pediatric inflammatory bowel disease. Nature communications 9 (1) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Xu Zhang