Yasubumi Sakakibara

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 16

Top Topics

Network Analysis

Convolutional Neural Network

Top Venues

Healthcare (Basel, Switzerland)

NAR genomics and bioinformatics

This page only lists publications with an associated author ORCID identifier.

Publications

Mika Uehara, Takashi Inoue, Sumitaka Hase, Erika Sasaki, Atsushi Toyoda, Yasubumi Sakakibara
Decoding host-microbiome interactions through co-expression network analysis within the non-human primate intestine. mSystems (2024)
Mika Uehara, Takashi Inoue, Sumitaka Hase, Erika Sasaki, Atsushi Toyoda, Yasubumi Sakakibara
Decoding host-microbiome interactions through co-expression network analysis within the non-human primate intestine. mSystems 9 (5) (2024)
Mika Uehara, Takashi Inoue, Sumitaka Hase, Erika Sasaki, Atsushi Toyoda, Yasubumi Sakakibara
Decoding host-microbiome interactions through co-expression network analysis within the non-human primate intestine. mSystems 9 (5) (2024)
Mika Uehara, Takashi Inoue, Sumitaka Hase, Erika Sasaki, Atsushi Toyoda, Yasubumi Sakakibara
Decoding host-microbiome interactions through co-expression network analysis within the non-human primate intestine. mSystems 9 (5) (2024)
Yurie Kanauchi, Masahiro Hashimoto, Naoki Toda, Saori Okamoto, Hasnine Haque, Masahiro Jinzaki, Yasubumi Sakakibara
Automatic Detection and Measurement of Renal Cysts in Ultrasound Images: A Deep Learning Approach. Healthcare (Basel, Switzerland) 11 (4) (2023)
Yurie Kanauchi, Masahiro Hashimoto, Naoki Toda, Saori Okamoto, Hasnine Haque, Masahiro Jinzaki, Yasubumi Sakakibara
Automatic Detection and Measurement of Renal Cysts in Ultrasound Images: A Deep Learning Approach. Healthcare (Basel, Switzerland) 11 (4) (2023)
Toshiki Ochiai, Tensei Inukai, Manato Akiyama, Kairi Furui, Masahito Ohue, Nobuaki Matsumori, Shinsuke Inuki, Motonari Uesugi, Toshiaki Sunazuka, Kazuya Kikuchi, Hideaki Kakeya, Yasubumi Sakakibara
Variational autoencoder-based chemical latent space for large molecular structures with 3D complexity. Communications chemistry 6 (1) (2023)
Yurie Kanauchi, Masahiro Hashimoto, Naoki Toda, Saori Okamoto, Hasnine Haque, Masahiro Jinzaki, Yasubumi Sakakibara
Automatic Detection and Measurement of Renal Cysts in Ultrasound Images: A Deep Learning Approach. Healthcare (Basel, Switzerland) 11 (4) (2023)
Manato Akiyama, Yasubumi Sakakibara
Informative RNA base embedding for RNA structural alignment and clustering by deep representation learning. NAR genomics and bioinformatics 4 (1) (2022)
Manato Akiyama, Yasubumi Sakakibara, Kengo Sato
Direct Inference of Base-Pairing Probabilities with Neural Networks Improves Prediction of RNA Secondary Structures with Pseudoknots. Genes 13 (11) (2022)
Afiahayati, Stefanus Bernard, null Gunadi, Hendra Wibawa, Mohamad Saifudin Hakim, null Marcellus, Arli Aditya Parikesit, Chandra Kusuma Dewa, Yasubumi Sakakibara
A Comparison of Bioinformatics Pipelines for Enrichment Illumina Next Generation Sequencing Systems in Detecting SARS-CoV-2 Virus Strains. Genes 13 (8) (2022)
Min Hu, Chikashi Asami, Hiroshi Iwakura, Yasuyo Nakajima, Ryousuke Sema, Tsuyoshi Kikuchi, Tsuyoshi Miyata, Koji Sakamaki, Takumi Kudo, Masanobu Yamada, Takashi Akamizu, Yasubumi Sakakibara
Development and preliminary validation of a machine learning system for thyroid dysfunction diagnosis based on routine laboratory tests. Communications medicine 2 (2022)
Vasanthan Jayakumar, Osamu Nishimura, Mitsutaka Kadota, Naoki Hirose, Hiromi Sano, Yasuhiro Murakawa, Yumiko Yamamoto, Masataka Nakaya, Tomoyuki Tsukiyama, Yasunari Seita, Shinichiro Nakamura, Jun Kawai, Erika Sasaki, Masatsugu Ema, Shigehiro Kuraku, Hideya Kawaji, Yasubumi Sakakibara
Chromosomal-scale de novo genome assemblies of Cynomolgus Macaque and Common Marmoset. Scientific data 8 (1) (2021)
Masashi Takeuchi, Takumi Seto, Masahiro Hashimoto, Nao Ichihara, Yosuke Morimoto, Hirofumi Kawakubo, Tatsuya Suzuki, Masahiro Jinzaki, Yuko Kitagawa, Hiroaki Miyata, Yasubumi Sakakibara
Performance of a deep learning-based identification system for esophageal cancer from CT images. Esophagus : official journal of the Japan Esophageal Society 18 (3) (2021)
Narumi Watanabe, Yuuto Ohnuki, Yasubumi Sakakibara
Deep learning integration of molecular and interactome data for protein-compound interaction prediction. Journal of cheminformatics 13 (1) (2021)
Yoshimasa Aoto, Tsuyoshi Hachiya, Kazuhiro Okumura, Sumitaka Hase, Kengo Sato, Yuichi Wakabayashi, Yasubumi Sakakibara
DEclust: A statistical approach for obtaining differential expression profiles of multiple conditions. PloS one 12 (11) (2017)