Zaida Luthey-Schulten

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 15

Top Venues

Nature communications

PLoS computational biology

Nature methods

eLife

University of Illinois System

Harvard University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Illinois System

United States

Professor :: Chemistry

Education History

Harvard University

United States

PHD :: Mathematics

Harvard University

United States

MSC :: Chemistry

University of Southern California

United States

BSC :: Chemistry

Publications

Benjamin R Gilbert, Zaida Luthey-Schulten
Replicating Chromosomes in Whole-Cell Models of Bacteria. Methods in molecular biology (Clifton, N.J.) 2819 (2024)
David M Bianchi, James F Pelletier, Clyde A Hutchison, John I Glass, Zaida Luthey-Schulten
Toward the Complete Functional Characterization of a Minimal Bacterial Proteome. The journal of physical chemistry. B 126 (36) (2022)
Marcelo Cardoso Dos Reis Melo, Rafael C Bernardi, Cesar de la Fuente-Nunez, Zaida Luthey-Schulten
Generalized correlation-based dynamical network analysis: a new high-performance approach for identifying allosteric communications in molecular dynamics trajectories. The Journal of chemical physics 153 (13) (2021)
Anustup Poddar, Muhammad S Azam, Tunc Kayikcioglu, Maksym Bobrovskyy, Jichuan Zhang, Xiangqian Ma, Piyush Labhsetwar, Taekjip Ha, Digvijay Singh, Zaida Luthey-Schulten, Carin K Vanderpool, Taekjip Ha
Effects of individual base-pairs on in vivo target search and destruction kinetics of bacterial small RNA. Nature communications 12 (1) (2021)
Sean P Carney, Wen Ma, Kevin D Whitley, Haifeng Jia, Timothy M Lohman, Zaida Luthey-Schulten, Yann R Chemla
Kinetic and structural mechanism for DNA unwinding by a non-hexameric helicase. Nature communications 12 (1) (2021)
Zaida Luthey-Schulten
Integrating experiments, theory and simulations into whole-cell models. Nature methods 18 (5) (2021)
James C Phillips, David J Hardy, Julio D C Maia, John E Stone, João V Ribeiro, Rafael C Bernardi, Ronak Buch, Giacomo Fiorin, Jérôme Hénin, Wei Jiang, Ryan McGreevy, Marcelo Cardoso Dos Reis Melo, Brian K Radak, Robert D Skeel, Abhishek Singharoy, Yi Wang, Benoı T Roux, Aleksei Aksimentiev, Zaida Luthey-Schulten, Laxmikant V Kalé, Klaus Schulten, Christophe J Chipot, Emad Tajkhorshid
Scalable molecular dynamics on CPU and GPU architectures with NAMD. The Journal of chemical physics 153 (4) (2020)
Zhaleh Ghaemi, Joseph R Peterson, Martin Gruebele, Zaida Luthey-Schulten
An in-silico human cell model reveals the influence of spatial organization on RNA splicing. PLoS computational biology 16 (3) (2020)
C Keith Cassidy, Benjamin A Himes, Dapeng Sun, Jun Ma, Gongpu Zhao, John S Parkinson, Phillip J Stansfeld, Zaida Luthey-Schulten, Peijun Zhang
Structure and dynamics of the E. coli chemotaxis core signaling complex by cryo-electron tomography and molecular simulations. Communications biology 3 (1) (2020)
Alister Burt, C Keith Cassidy, Peter Ames, Maria Bacia-Verloop, Megghane Baulard, Karine Huard, Zaida Luthey-Schulten, Ambroise Desfosses, Phillip J Stansfeld, William Margolin, John S Parkinson, Irina Gutsche
Complete structure of the chemosensory array core signalling unit in an E. coli minicell strain. Nature communications 11 (1) (2020)
Marian Breuer, Tyler M Earnest, Chuck Merryman, Kim S Wise, Lijie Sun, Michaela R Lynott, Clyde A Hutchison, Hamilton O Smith, John D Lapek, David J Gonzalez, Valérie de Crécy-Lagard, Drago Haas, Andrew D Hanson, Piyush Labhsetwar, John I Glass, Zaida Luthey-Schulten
Essential metabolism for a minimal cell. eLife 8 (2019)
Wen Ma, Kevin D Whitley, Yann R Chemla, Zaida Luthey-Schulten, Klaus Schulten
Free-energy simulations reveal molecular mechanism for functional switch of a DNA helicase. eLife 7 (2018)
Marcelo Cardoso Dos Reis Melo, Rafael C Bernardi, Till Rudack, Maximilian Scheurer, Christoph Riplinger, James C Phillips, Julio D C Maia, Gerd Bruno Rocha, João V Ribeiro, John E Stone, Frank Neese, Klaus Schulten, Zaida Luthey-Schulten
NAMD goes quantum: an integrative suite for hybrid simulations. Nature methods 15 (5) (2018)
Piyush Labhsetwar, Marcelo Cardoso Dos Reis Melo, John A Cole, Zaida Luthey-Schulten
Population FBA predicts metabolic phenotypes in yeast. PLoS computational biology 13 (9) (2017)
ShengShee Thor, Joseph R Peterson, Zaida Luthey-Schulten
Genome-Scale Metabolic Modeling of Archaea Lends Insight into Diversity of Metabolic Function. Archaea (Vancouver, B.C.) 2017 (2017)

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Publication Activity (10 Years)

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Zaida Luthey-Schulten