Computational design of constitutively active cGAS.
Quinton M DowlingHannah E VolkmanElizabeth E GraySergey OvchinnikovStephanie CambierAsim K BeraBanumathi SankaranMax R JohnsonMatthew J BickAlex KangDaniel B StetsonNeil P KingPublished in: Nature structural & molecular biology (2023)
Cyclic GMP-AMP synthase (cGAS) is a pattern recognition receptor critical for the innate immune response to intracellular pathogens, DNA damage, tumorigenesis and senescence. Binding to double-stranded DNA (dsDNA) induces conformational changes in cGAS that activate the enzyme to produce 2'-3' cyclic GMP-AMP (cGAMP), a second messenger that initiates a potent interferon (IFN) response through its receptor, STING. Here, we combined two-state computational design with informatics-guided design to create constitutively active, dsDNA ligand-independent cGAS (CA-cGAS). We identified CA-cGAS mutants with IFN-stimulating activity approaching that of dsDNA-stimulated wild-type cGAS. DNA-independent adoption of the active conformation was directly confirmed by X-ray crystallography. In vivo expression of CA-cGAS in tumor cells resulted in STING-dependent tumor regression, demonstrating that the designed proteins have therapeutically relevant biological activity. Our work provides a general framework for stabilizing active conformations of enzymes and provides CA-cGAS variants that could be useful as genetically encoded adjuvants and tools for understanding inflammatory diseases.
Keyphrases
- dna damage
- protein kinase
- wild type
- dendritic cells
- oxidative stress
- innate immune
- single molecule
- binding protein
- immune response
- gene expression
- staphylococcus aureus
- cell free
- circulating tumor
- molecular dynamics simulations
- magnetic resonance
- machine learning
- magnetic resonance imaging
- dna repair
- mass spectrometry
- big data
- multidrug resistant
- long non coding rna
- cystic fibrosis
- antimicrobial resistance
- candida albicans