Banumathi Sankaran (B Sankaran)

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 63

Top Topics

Benign Prostatic Hyperplasia

Protein Protein

Top Venues

Nature communications

Science advances

Science (New York, N.Y.)

This page only lists publications with an associated author ORCID identifier.

Publications

Timothy F Huddy, Yang Hsia, Ryan D Kibler, Jinwei Xu, Neville P Bethel, Deepesh Nagarajan, Rachel Redler, Philip J Y Leung, Connor Weidle, Alexis Courbet, Erin C Yang, Asim K Bera, Nicolas Coudray, S John Calise, Fatima A Davila-Hernandez, Hannah L Han, Kenneth D Carr, Zhe Li, Ryan McHugh, Gabriella Reggiano, Alex Kang, Banumathi Sankaran, Miles S Dickinson, Brian Coventry, T J Brunette, Yulai Liu, Justas Dauparas, Andrew J Borst, Damian C Ekiert, Justin M Kollman, Gira Bhabha, Julien S Baker
Blueprinting extendable nanomaterials with standardized protein blocks. Nature (2024)
Stephanie M Stanford, Tiffany P Nguyen, Joseph Chang, Zixuan Zhao, G Lavender Hackman, Eugenio Santelli, Colton M Sanders, Madhusudhanarao Katiki, Eleonora Dondossola, Brooke L Brauer, Michael A Diaz, Yuan Zhan, Sterling H Ramsey, Philip A Watson, Banumathi Sankaran, Claudia Paindelli, Vanessa Parietti, Antonios G Mikos, Alessia Lodi, Aditya Bagrodia, Andrew Elliott, Rana R McKay, Ramachandran Murali, Stefano Tiziani, Arminja N Kettenbach, Nunzio Bottini
Targeting prostate tumor low-molecular weight tyrosine phosphatase for oxidation-sensitizing therapy. Science advances 10 (5) (2024)
Boyang Zhao, Liya Hu, Soni Kaundal, Neetu Neetu, Christopher H Lee, Xayathed Somoulay, Banumathi Sankaran, Gwen M Taylor, Terence S Dermody, B V Venkataram Prasad
Structure of orthoreovirus RNA chaperone σNS, a component of viral replication factories. Nature communications 15 (1) (2024)
Boyang Zhao, Liya Hu, Soni Kaundal, Neetu Neetu, Christopher H Lee, Xayathed Somoulay, Banumathi Sankaran, Gwen M Taylor, Terence S Dermody, B V Venkataram Prasad
Structure of orthoreovirus RNA chaperone σNS, a component of viral replication factories. Nature communications 15 (1) (2024)
Samuel Berhanu, Sagardip Majumder, Thomas Müntener, James Whitehouse, Carolin Berner, Asim K Bera, Alex Kang, Binyong Liang, G Nasir Khan, Banumathi Sankaran, Lukas K Tamm, David J Brockwell, Sebastian Hiller, Sheena E Radford, Julien S Baker, Anastassia Andreevna Vorobieva
Sculpting conducting nanopore size and shape through de novo protein design. Science (New York, N.Y.) 385 (6706) (2024)
Nathan M Ennist, Shunzhi Wang, Madison A Kennedy, Mariano Curti, George A Sutherland, Cvetelin Vasilev, Rachel L Redler, Valentin Maffeis, Saeed Shareef, Anthony V Sica, Ash Sueh Hua, Arundhati P Deshmukh, Adam P Moyer, Derrick R Hicks, Avi Z Swartz, Ralph A Cacho, Nathan Novy, Asim K Bera, Alex Kang, Banumathi Sankaran, Matthew P Johnson, Amala Phadkule, Mike Reppert, Damian C Ekiert, Gira Bhabha, Lance J Stewart, Justin R Caram, Barry L Stoddard, Elisabet Romero, Christopher Neil Hunter, Julien S Baker
De novo design of proteins housing excitonically coupled chlorophyll special pairs. Nature chemical biology (2024)
Timothy F Huddy, Yang Hsia, Ryan D Kibler, Jinwei Xu, Neville P Bethel, Deepesh Nagarajan, Rachel Redler, Philip J Y Leung, Connor Weidle, Alexis Courbet, Erin C Yang, Asim K Bera, Nicolas Coudray, S John Calise, Fatima A Davila-Hernandez, Hannah L Han, Kenneth D Carr, Zhe Li, Ryan McHugh, Gabriella Reggiano, Alex Kang, Banumathi Sankaran, Miles S Dickinson, Brian Coventry, T J Brunette, Yulai Liu, Justas Dauparas, Andrew J Borst, Damian C Ekiert, Justin M Kollman, Gira Bhabha, Julien S Baker
Blueprinting extendable nanomaterials with standardized protein blocks. Nature 627 (8005) (2024)
Timothy F Huddy, Yang Hsia, Ryan D Kibler, Jinwei Xu, Neville P Bethel, Deepesh Nagarajan, Rachel Redler, Philip J Y Leung, Connor Weidle, Alexis Courbet, Erin C Yang, Asim K Bera, Nicolas Coudray, S John Calise, Fatima A Davila-Hernandez, Hannah L Han, Kenneth D Carr, Zhe Li, Ryan McHugh, Gabriella Reggiano, Alex Kang, Banumathi Sankaran, Miles S Dickinson, Brian Coventry, T J Brunette, Yulai Liu, Justas Dauparas, Andrew J Borst, Damian C Ekiert, Justin M Kollman, Gira Bhabha, Julien S Baker
Blueprinting extendable nanomaterials with standardized protein blocks. Nature 627 (8005) (2024)
Nathan M Ennist, Shunzhi Wang, Madison A Kennedy, Mariano Curti, George A Sutherland, Cvetelin Vasilev, Rachel L Redler, Valentin Maffeis, Saeed Shareef, Anthony V Sica, Ash Sueh Hua, Arundhati P Deshmukh, Adam P Moyer, Derrick R Hicks, Avi Z Swartz, Ralph A Cacho, Nathan Novy, Asim K Bera, Alex Kang, Banumathi Sankaran, Matthew P Johnson, Amala Phadkule, Mike Reppert, Damian C Ekiert, Gira Bhabha, Lance J Stewart, Justin R Caram, Barry L Stoddard, Elisabet Romero, Christopher Neil Hunter, Julien S Baker
De novo design of proteins housing excitonically coupled chlorophyll special pairs. Nature chemical biology 20 (7) (2024)
Timothy F Huddy, Yang Hsia, Ryan D Kibler, Jinwei Xu, Neville P Bethel, Deepesh Nagarajan, Rachel Redler, Philip J Y Leung, Connor Weidle, Alexis Courbet, Erin C Yang, Asim K Bera, Nicolas Coudray, S John Calise, Fatima A Davila-Hernandez, Hannah L Han, Kenneth D Carr, Zhe Li, Ryan McHugh, Gabriella Reggiano, Alex Kang, Banumathi Sankaran, Miles S Dickinson, Brian Coventry, T J Brunette, Yulai Liu, Justas Dauparas, Andrew J Borst, Damian C Ekiert, Justin M Kollman, Gira Bhabha, Julien S Baker
Blueprinting extendable nanomaterials with standardized protein blocks. Nature 627 (8005) (2024)
Nathan M Ennist, Shunzhi Wang, Madison A Kennedy, Mariano Curti, George A Sutherland, Cvetelin Vasilev, Rachel L Redler, Valentin Maffeis, Saeed Shareef, Anthony V Sica, Ash Sueh Hua, Arundhati P Deshmukh, Adam P Moyer, Derrick R Hicks, Avi Z Swartz, Ralph A Cacho, Nathan Novy, Asim K Bera, Alex Kang, Banumathi Sankaran, Matthew P Johnson, Amala Phadkule, Mike Reppert, Damian C Ekiert, Gira Bhabha, Lance J Stewart, Justin R Caram, Barry L Stoddard, Elisabet Romero, Christopher Neil Hunter, Julien S Baker
De novo design of proteins housing excitonically coupled chlorophyll special pairs. Nature chemical biology (2024)
Timothy F Huddy, Yang Hsia, Ryan D Kibler, Jinwei Xu, Neville P Bethel, Deepesh Nagarajan, Rachel Redler, Philip J Y Leung, Connor Weidle, Alexis Courbet, Erin C Yang, Asim K Bera, Nicolas Coudray, S John Calise, Fatima A Davila-Hernandez, Hannah L Han, Kenneth D Carr, Zhe Li, Ryan McHugh, Gabriella Reggiano, Alex Kang, Banumathi Sankaran, Miles S Dickinson, Brian Coventry, T J Brunette, Yulai Liu, Justas Dauparas, Andrew J Borst, Damian C Ekiert, Justin M Kollman, Gira Bhabha, Julien S Baker
Blueprinting extendable nanomaterials with standardized protein blocks. Nature 627 (8005) (2024)
Timothy F Huddy, Yang Hsia, Ryan D Kibler, Jinwei Xu, Neville P Bethel, Deepesh Nagarajan, Rachel Redler, Philip J Y Leung, Connor Weidle, Alexis Courbet, Erin C Yang, Asim K Bera, Nicolas Coudray, S John Calise, Fatima A Davila-Hernandez, Hannah L Han, Kenneth D Carr, Zhe Li, Ryan McHugh, Gabriella Reggiano, Alex Kang, Banumathi Sankaran, Miles S Dickinson, Brian Coventry, T J Brunette, Yulai Liu, Justas Dauparas, Andrew J Borst, Damian C Ekiert, Justin M Kollman, Gira Bhabha, Julien S Baker
Blueprinting extendable nanomaterials with standardized protein blocks. Nature (2024)
Boyang Zhao, Liya Hu, Soni Kaundal, Neetu Neetu, Christopher H Lee, Xayathed Somoulay, Banumathi Sankaran, Gwen M Taylor, Terence S Dermody, B V Venkataram Prasad
Structure of orthoreovirus RNA chaperone σNS, a component of viral replication factories. Nature communications 15 (1) (2024)
Timothy F Huddy, Yang Hsia, Ryan D Kibler, Jinwei Xu, Neville P Bethel, Deepesh Nagarajan, Rachel Redler, Philip J Y Leung, Connor Weidle, Alexis Courbet, Erin C Yang, Asim K Bera, Nicolas Coudray, S John Calise, Fatima A Davila-Hernandez, Hannah L Han, Kenneth D Carr, Zhe Li, Ryan McHugh, Gabriella Reggiano, Alex Kang, Banumathi Sankaran, Miles S Dickinson, Brian Coventry, T J Brunette, Yulai Liu, Justas Dauparas, Andrew J Borst, Damian C Ekiert, Justin M Kollman, Gira Bhabha, Julien S Baker
Blueprinting extendable nanomaterials with standardized protein blocks. Nature 627 (8005) (2024)
Stephanie M Stanford, Tiffany P Nguyen, Joseph Chang, Zixuan Zhao, G Lavender Hackman, Eugenio Santelli, Colton M Sanders, Madhusudhanarao Katiki, Eleonora Dondossola, Brooke L Brauer, Michael A Diaz, Yuan Zhan, Sterling H Ramsey, Philip A Watson, Banumathi Sankaran, Claudia Paindelli, Vanessa Parietti, Antonios G Mikos, Alessia Lodi, Aditya Bagrodia, Andrew Elliott, Rana R McKay, Ramachandran Murali, Stefano Tiziani, Arminja N Kettenbach, Nunzio Bottini
Targeting prostate tumor low-molecular weight tyrosine phosphatase for oxidation-sensitizing therapy. Science advances 10 (5) (2024)
Boyang Zhao, Liya Hu, Soni Kaundal, Neetu Neetu, Christopher H Lee, Xayathed Somoulay, Banumathi Sankaran, Gwen M Taylor, Terence S Dermody, B V Venkataram Prasad
Structure of orthoreovirus RNA chaperone σNS, a component of viral replication factories. Nature communications 15 (1) (2024)
Timothy F Huddy, Yang Hsia, Ryan D Kibler, Jinwei Xu, Neville P Bethel, Deepesh Nagarajan, Rachel Redler, Philip J Y Leung, Connor Weidle, Alexis Courbet, Erin C Yang, Asim K Bera, Nicolas Coudray, S John Calise, Fatima A Davila-Hernandez, Hannah L Han, Kenneth D Carr, Zhe Li, Ryan McHugh, Gabriella Reggiano, Alex Kang, Banumathi Sankaran, Miles S Dickinson, Brian Coventry, T J Brunette, Yulai Liu, Justas Dauparas, Andrew J Borst, Damian C Ekiert, Justin M Kollman, Gira Bhabha, Julien S Baker
Blueprinting extendable nanomaterials with standardized protein blocks. Nature 627 (8005) (2024)
Samuel Berhanu, Sagardip Majumder, Thomas Müntener, James Whitehouse, Carolin Berner, Asim K Bera, Alex Kang, Binyong Liang, G Nasir Khan, Banumathi Sankaran, Lukas K Tamm, David J Brockwell, Sebastian Hiller, Sheena E Radford, Julien S Baker, Anastassia Andreevna Vorobieva
Sculpting conducting nanopore size and shape through de novo protein design. Science (New York, N.Y.) 385 (6706) (2024)
Boyang Zhao, Liya Hu, Soni Kaundal, Neetu Neetu, Christopher H Lee, Xayathed Somoulay, Banumathi Sankaran, Gwen M Taylor, Terence S Dermody, B V Venkataram Prasad
Structure of orthoreovirus RNA chaperone σNS, a component of viral replication factories. Nature communications 15 (1) (2024)
Timothy F Huddy, Yang Hsia, Ryan D Kibler, Jinwei Xu, Neville P Bethel, Deepesh Nagarajan, Rachel Redler, Philip J Y Leung, Connor Weidle, Alexis Courbet, Erin C Yang, Asim K Bera, Nicolas Coudray, S John Calise, Fatima A Davila-Hernandez, Hannah L Han, Kenneth D Carr, Zhe Li, Ryan McHugh, Gabriella Reggiano, Alex Kang, Banumathi Sankaran, Miles S Dickinson, Brian Coventry, T J Brunette, Yulai Liu, Justas Dauparas, Andrew J Borst, Damian C Ekiert, Justin M Kollman, Gira Bhabha, Julien S Baker
Blueprinting extendable nanomaterials with standardized protein blocks. Nature 627 (8005) (2024)
Boyang Zhao, Liya Hu, Soni Kaundal, Neetu Neetu, Christopher H Lee, Xayathed Somoulay, Banumathi Sankaran, Gwen M Taylor, Terence S Dermody, B V Venkataram Prasad
Structure of orthoreovirus RNA chaperone σNS, a component of viral replication factories. Nature communications 15 (1) (2024)
Timothy F Huddy, Yang Hsia, Ryan D Kibler, Jinwei Xu, Neville P Bethel, Deepesh Nagarajan, Rachel Redler, Philip J Y Leung, Connor Weidle, Alexis Courbet, Erin C Yang, Asim K Bera, Nicolas Coudray, S John Calise, Fatima A Davila-Hernandez, Hannah L Han, Kenneth D Carr, Zhe Li, Ryan McHugh, Gabriella Reggiano, Alex Kang, Banumathi Sankaran, Miles S Dickinson, Brian Coventry, T J Brunette, Yulai Liu, Justas Dauparas, Andrew J Borst, Damian C Ekiert, Justin M Kollman, Gira Bhabha, Julien S Baker
Blueprinting extendable nanomaterials with standardized protein blocks. Nature 627 (8005) (2024)
Stephanie M Stanford, Tiffany P Nguyen, Joseph Chang, Zixuan Zhao, G Lavender Hackman, Eugenio Santelli, Colton M Sanders, Madhusudhanarao Katiki, Eleonora Dondossola, Brooke L Brauer, Michael A Diaz, Yuan Zhan, Sterling H Ramsey, Philip A Watson, Banumathi Sankaran, Claudia Paindelli, Vanessa Parietti, Antonios G Mikos, Alessia Lodi, Aditya Bagrodia, Andrew Elliott, Rana R McKay, Ramachandran Murali, Stefano Tiziani, Arminja N Kettenbach, Nunzio Bottini
Targeting prostate tumor low-molecular weight tyrosine phosphatase for oxidation-sensitizing therapy. Science advances 10 (5) (2024)
Boyang Zhao, Liya Hu, Soni Kaundal, Neetu Neetu, Christopher H Lee, Xayathed Somoulay, Banumathi Sankaran, Gwen M Taylor, Terence S Dermody, B V Venkataram Prasad
Structure of orthoreovirus RNA chaperone σNS, a component of viral replication factories. Nature communications 15 (1) (2024)
Stephanie M Stanford, Tiffany P Nguyen, Joseph Chang, Zixuan Zhao, G Lavender Hackman, Eugenio Santelli, Colton M Sanders, Madhusudhanarao Katiki, Eleonora Dondossola, Brooke L Brauer, Michael A Diaz, Yuan Zhan, Sterling H Ramsey, Philip A Watson, Banumathi Sankaran, Claudia Paindelli, Vanessa Parietti, Antonios G Mikos, Alessia Lodi, Aditya Bagrodia, Andrew Elliott, Rana R McKay, Ramachandran Murali, Stefano Tiziani, Arminja N Kettenbach, Nunzio Bottini
Targeting prostate tumor low-molecular weight tyrosine phosphatase for oxidation-sensitizing therapy. Science advances 10 (5) (2024)
Nathan M Ennist, Shunzhi Wang, Madison A Kennedy, Mariano Curti, George A Sutherland, Cvetelin Vasilev, Rachel L Redler, Valentin Maffeis, Saeed Shareef, Anthony V Sica, Ash Sueh Hua, Arundhati P Deshmukh, Adam P Moyer, Derrick R Hicks, Avi Z Swartz, Ralph A Cacho, Nathan Novy, Asim K Bera, Alex Kang, Banumathi Sankaran, Matthew P Johnson, Amala Phadkule, Mike Reppert, Damian C Ekiert, Gira Bhabha, Lance J Stewart, Justin R Caram, Barry L Stoddard, Elisabet Romero, Christopher Neil Hunter, Julien S Baker
De novo design of proteins housing excitonically coupled chlorophyll special pairs. Nature chemical biology 20 (7) (2024)
Stephanie M Stanford, Tiffany P Nguyen, Joseph Chang, Zixuan Zhao, G Lavender Hackman, Eugenio Santelli, Colton M Sanders, Madhusudhanarao Katiki, Eleonora Dondossola, Brooke L Brauer, Michael A Diaz, Yuan Zhan, Sterling H Ramsey, Philip A Watson, Banumathi Sankaran, Claudia Paindelli, Vanessa Parietti, Antonios G Mikos, Alessia Lodi, Aditya Bagrodia, Andrew Elliott, Rana R McKay, Ramachandran Murali, Stefano Tiziani, Arminja N Kettenbach, Nunzio Bottini
Targeting prostate tumor low-molecular weight tyrosine phosphatase for oxidation-sensitizing therapy. Science advances 10 (5) (2024)
Nathan M Ennist, Shunzhi Wang, Madison A Kennedy, Mariano Curti, George A Sutherland, Cvetelin Vasilev, Rachel L Redler, Valentin Maffeis, Saeed Shareef, Anthony V Sica, Ash Sueh Hua, Arundhati P Deshmukh, Adam P Moyer, Derrick R Hicks, Avi Z Swartz, Ralph A Cacho, Nathan Novy, Asim K Bera, Alex Kang, Banumathi Sankaran, Matthew P Johnson, Amala Phadkule, Mike Reppert, Damian C Ekiert, Gira Bhabha, Lance J Stewart, Justin R Caram, Barry L Stoddard, Elisabet Romero, Christopher Neil Hunter, Julien S Baker
De novo design of proteins housing excitonically coupled chlorophyll special pairs. Nature chemical biology 20 (7) (2024)
Angela F Ku, Kiran L Sharma, Hai Minh Ta, Courtney M Sutton, Kurt M Bohren, Yong Wang, Srinivas Chamakuri, Ruihong Chen, John M Hakenjos, Ravikumar Jimmidi, Katarzyna Kent, Feng Li, Jian-Yuan Li, Lang Ma, Chandrashekhar Madasu, Murugesan Palaniappan, Stephen S Palmer, Xuan Qin, Matthew B Robers, Banumathi Sankaran, Zhi Tan, Yasmin M Vasquez, Jian Wang, Jennifer Wilkinson, Zhifeng Yu, Qiuji Ye, Damian W Young, Mingxing Teng, Choel Kim, Martin M Matzuk
Reversible male contraception by targeted inhibition of serine/threonine kinase 33. Science (New York, N.Y.) 384 (6698) (2024)
Timothy F Huddy, Yang Hsia, Ryan D Kibler, Jinwei Xu, Neville P Bethel, Deepesh Nagarajan, Rachel Redler, Philip J Y Leung, Connor Weidle, Alexis Courbet, Erin C Yang, Asim K Bera, Nicolas Coudray, S John Calise, Fatima A Davila-Hernandez, Hannah L Han, Kenneth D Carr, Zhe Li, Ryan McHugh, Gabriella Reggiano, Alex Kang, Banumathi Sankaran, Miles S Dickinson, Brian Coventry, T J Brunette, Yulai Liu, Justas Dauparas, Andrew J Borst, Damian C Ekiert, Justin M Kollman, Gira Bhabha, Julien S Baker
Blueprinting extendable nanomaterials with standardized protein blocks. Nature 627 (8005) (2024)
Stephanie M Stanford, Tiffany P Nguyen, Joseph Chang, Zixuan Zhao, G Lavender Hackman, Eugenio Santelli, Colton M Sanders, Madhusudhanarao Katiki, Eleonora Dondossola, Brooke L Brauer, Michael A Diaz, Yuan Zhan, Sterling H Ramsey, Philip A Watson, Banumathi Sankaran, Claudia Paindelli, Vanessa Parietti, Antonios G Mikos, Alessia Lodi, Aditya Bagrodia, Andrew Elliott, Rana R McKay, Ramachandran Murali, Stefano Tiziani, Arminja N Kettenbach, Nunzio Bottini
Targeting prostate tumor low-molecular weight tyrosine phosphatase for oxidation-sensitizing therapy. Science advances 10 (5) (2024)
Angela F Ku, Kiran L Sharma, Hai Minh Ta, Courtney M Sutton, Kurt M Bohren, Yong Wang, Srinivas Chamakuri, Ruihong Chen, John M Hakenjos, Ravikumar Jimmidi, Katarzyna Kent, Feng Li, Jian-Yuan Li, Lang Ma, Chandrashekhar Madasu, Murugesan Palaniappan, Stephen S Palmer, Xuan Qin, Matthew B Robers, Banumathi Sankaran, Zhi Tan, Yasmin M Vasquez, Jian Wang, Jennifer Wilkinson, Zhifeng Yu, Qiuji Ye, Damian W Young, Mingxing Teng, Choel Kim, Martin M Matzuk
Reversible male contraception by targeted inhibition of serine/threonine kinase 33. Science (New York, N.Y.) 384 (6698) (2024)
Nathan M Ennist, Shunzhi Wang, Madison A Kennedy, Mariano Curti, George A Sutherland, Cvetelin Vasilev, Rachel L Redler, Valentin Maffeis, Saeed Shareef, Anthony V Sica, Ash Sueh Hua, Arundhati P Deshmukh, Adam P Moyer, Derrick R Hicks, Avi Z Swartz, Ralph A Cacho, Nathan Novy, Asim K Bera, Alex Kang, Banumathi Sankaran, Matthew P Johnson, Amala Phadkule, Mike Reppert, Damian C Ekiert, Gira Bhabha, Lance J Stewart, Justin R Caram, Barry L Stoddard, Elisabet Romero, Christopher Neil Hunter, Julien S Baker
De novo design of proteins housing excitonically coupled chlorophyll special pairs. Nature chemical biology 20 (7) (2024)
Allison K Judge, Liya Hu, Banumathi Sankaran, Justin Van Riper, B V Venkataram Prasad, Timothy G Palzkill
Mapping the determinants of catalysis and substrate specificity of the antibiotic resistance enzyme CTX-M β-lactamase. Communications biology 6 (1) (2023)
Quinton M Dowling, Hannah E Volkman, Elizabeth E Gray, Sergey Ovchinnikov, Stephanie Cambier, Asim K Bera, Banumathi Sankaran, Max R Johnson, Matthew J Bick, Alex Kang, Daniel B Stetson, Neil P King
Computational design of constitutively active cGAS. Nature structural & molecular biology (2023)
Nathan M Ennist, Shunzhi Wang, Madison Kennedy, Mariano Curti, George Sutherland, Cvetelin Vasilev, Rachel Redler, Valentin Maffeis, Saeed Shareef, Anthony Sica, Ash Hua, Arundhati Deshmukh, Adam Moyer, Derrick Hicks, Avi Swartz, Ralph Cacho, Nathan Novy, Asim K Bera, Alex Kang, Banumathi Sankaran, Matthew Johnson, Mike Reppert, Damian C Ekiert, Gira Bhabha, Lance J Stewart, Justin Caram, Barry L Stoddard, Elisabet Romero, Christopher Neil Hunter, Julien S Baker
De novo design of energy transfer proteins housing excitonically coupled chlorophyll special pairs. Research square (2023)
Quinton M Dowling, Hannah E Volkman, Elizabeth E Gray, Sergey Ovchinnikov, Stephanie Cambier, Asim K Bera, Banumathi Sankaran, Max R Johnson, Matthew J Bick, Alex Kang, Daniel B Stetson, Neil P King
Computational design of constitutively active cGAS. Nature structural & molecular biology 30 (1) (2023)
Zhe Li, Shunzhi Wang, Una Nattermann, Asim K Bera, Andrew J Borst, Muammer Y Yaman, Matthew J Bick, Erin C Yang, William Sheffler, Byeongdu Lee, Soenke Seifert, Greg L Hura, Hannah Nguyen, Alex Kang, Radhika Dalal, Joshua M Lubner, Yang Hsia, Hugh Haddox, Alexis Courbet, Quinton Dowling, Marcos C Miranda, Andrew Favor, Ali Etemadi, Natasha I Edman, Wei Yang, Connor Weidle, Banumathi Sankaran, Babak Negahdari, Michael B Ross, David S Ginger, Julien S Baker
Accurate computational design of three-dimensional protein crystals. Nature materials (2023)
Allison K Judge, Liya Hu, Banumathi Sankaran, Justin Van Riper, B V Venkataram Prasad, Timothy G Palzkill
Mapping the determinants of catalysis and substrate specificity of the antibiotic resistance enzyme CTX-M β-lactamase. Communications biology 6 (1) (2023)
Nathan M Ennist, Shunzhi Wang, Madison Kennedy, Mariano Curti, George Sutherland, Cvetelin Vasilev, Rachel Redler, Valentin Maffeis, Saeed Shareef, Anthony Sica, Ash Hua, Arundhati Deshmukh, Adam Moyer, Derrick Hicks, Avi Swartz, Ralph Cacho, Nathan Novy, Asim K Bera, Alex Kang, Banumathi Sankaran, Matthew Johnson, Mike Reppert, Damian C Ekiert, Gira Bhabha, Lance J Stewart, Justin Caram, Barry L Stoddard, Elisabet Romero, Christopher Neil Hunter, Julien S Baker
De novo design of energy transfer proteins housing excitonically coupled chlorophyll special pairs. Research square (2023)
Wilhelm Salmen, Liya Hu, Marina Bok, Natthawan Chaimongkol, Khalil Ettayebi, Stanislav V Sosnovtsev, Kaundal Soni, B Vijayalakshmi Ayyar, Sreejesh Shanker, Frederick H Neill, Banumathi Sankaran, Robert L Atmar, Mary K Estes, Kim Y Green, Viviana Parreño, B V Venkataram Prasad
A single nanobody neutralizes multiple epochally evolving human noroviruses by modulating capsid plasticity. Nature communications 14 (1) (2023)
Ravikumar Jimmidi, Srinivas Chamakuri, Shuo Lu, Melek Nihan Ucisik, Peng-Jen Chen, Kurt M Bohren, Seyed Arad Moghadasi, Leroy Versteeg, Christina Nnabuife, Jian-Yuan Li, Xuan Qin, Ying-Chu Chen, John C Faver, Pranavanand Nyshadham, Kiran L Sharma, Banumathi Sankaran, Allison K Judge, Zhifeng Yu, Feng Li, Jeroen Pollet, Reuben S Harris, Martin M Matzuk, Timothy G Palzkill, Damian W Young
DNA-encoded chemical libraries yield non-covalent and non-peptidic SARS-CoV-2 main protease inhibitors. Communications chemistry 6 (1) (2023)
Quinton M Dowling, Hannah E Volkman, Elizabeth E Gray, Sergey Ovchinnikov, Stephanie Cambier, Asim K Bera, Banumathi Sankaran, Max R Johnson, Matthew J Bick, Alex Kang, Daniel B Stetson, Neil P King
Computational design of constitutively active cGAS. Nature structural & molecular biology 30 (1) (2023)
Quinton M Dowling, Hannah E Volkman, Elizabeth E Gray, Sergey Ovchinnikov, Stephanie Cambier, Asim K Bera, Banumathi Sankaran, Max R Johnson, Matthew J Bick, Alex Kang, Daniel B Stetson, Neil P King
Computational design of constitutively active cGAS. Nature structural & molecular biology 30 (1) (2023)
Diego Rodríguez-Hernández, Kamalakannan Vijayan, Rachael Zigweid, Michael K Fenwick, Banumathi Sankaran, Wanlapa Roobsoong, Jetsumon Sattabongkot, Elizabeth K K Glennon, Peter J Myler, Per Sunnerhagen, Bart L Staker, Alexis Kaushansky, Morten Grøtli
Identification of potent and selective N-myristoyltransferase inhibitors of Plasmodium vivax liver stage hypnozoites and schizonts. Nature communications 14 (1) (2023)
Neville P Bethel, Andrew J Borst, Fabio Parmeggiani, Matthew J Bick, T J Brunette, Hannah Nguyen, Alex Kang, Asim K Bera, Lauren Carter, Marcos C Miranda, Ryan D Kibler, Mila Lamb, Xinting Li, Banumathi Sankaran, Julien S Baker
Precisely patterned nanofibres made from extendable protein multiplexes. Nature chemistry (2023)
Allison K Judge, Liya Hu, Banumathi Sankaran, Justin Van Riper, B V Venkataram Prasad, Timothy G Palzkill
Mapping the determinants of catalysis and substrate specificity of the antibiotic resistance enzyme CTX-M β-lactamase. Communications biology 6 (1) (2023)
Allison K Judge, Liya Hu, Banumathi Sankaran, Justin Van Riper, B V Venkataram Prasad, Timothy G Palzkill
Mapping the determinants of catalysis and substrate specificity of the antibiotic resistance enzyme CTX-M β-lactamase. Communications biology 6 (1) (2023)
Florian Praetorius, Philip J Y Leung, Maxx H Tessmer, Adam Broerman, Cullen Demakis, Acacia F Dishman, Arvind S Pillai, Abbas Idris, David C Juergens, Justas Dauparas, Xinting Li, Paul M Levine, Mila Lamb, Ryanne K Ballard, Stacey R Gerben, Hannah Nguyen, Alex Kang, Banumathi Sankaran, Asim K Bera, Brian F Volkman, Jeff Nivala, Stefan Stoll, Julien S Baker
Design of stimulus-responsive two-state hinge proteins. Science (New York, N.Y.) 381 (6659) (2023)
Nathan M Ennist, Shunzhi Wang, Madison Kennedy, Mariano Curti, George Sutherland, Cvetelin Vasilev, Rachel Redler, Valentin Maffeis, Saeed Shareef, Anthony Sica, Ash Hua, Arundhati Deshmukh, Adam Moyer, Derrick Hicks, Avi Swartz, Ralph Cacho, Nathan Novy, Asim K Bera, Alex Kang, Banumathi Sankaran, Matthew Johnson, Mike Reppert, Damian C Ekiert, Gira Bhabha, Lance J Stewart, Justin Caram, Barry L Stoddard, Elisabet Romero, Christopher Neil Hunter, Julien S Baker
De novo design of energy transfer proteins housing excitonically coupled chlorophyll special pairs. Research square (2023)
Quinton M Dowling, Hannah E Volkman, Elizabeth E Gray, Sergey Ovchinnikov, Stephanie Cambier, Asim K Bera, Banumathi Sankaran, Max R Johnson, Matthew J Bick, Alex Kang, Daniel B Stetson, Neil P King
Computational design of constitutively active cGAS. Nature structural & molecular biology 30 (1) (2023)
Boyang Zhao, Liya Hu, Soni Kaundal, Christopher H Lee, Xayathed Somoulay, Banumathi Sankaran, Gwen M Taylor, Terence S Dermody, B V Venkataram Prasad
Structure of Orthoreovirus RNA Chaperone σNS, a Component of Viral Replication Factories. bioRxiv : the preprint server for biology (2023)
Allison K Judge, Liya Hu, Banumathi Sankaran, Justin Van Riper, B V Venkataram Prasad, Timothy G Palzkill
Mapping the determinants of catalysis and substrate specificity of the antibiotic resistance enzyme CTX-M β-lactamase. Communications biology 6 (1) (2023)
Shuo Lu, Liya Hu, Hanfeng Lin, Allison K Judge, Paola Rivera, Murugesan Palaniappan, Banumathi Sankaran, Jin Wang, B V Venkataram Prasad, Timothy G Palzkill
An active site loop toggles between conformations to control antibiotic hydrolysis and inhibition potency for CTX-M β-lactamase drug-resistance enzymes. Nature communications 13 (1) (2022)
Liya Hu, Wilhelm Salmen, Banumathi Sankaran, Yi Lasanajak, David F Smith, Sue E Crawford, Mary K Estes, B V Venkataram Prasad
Novel fold of rotavirus glycan-binding domain predicted by AlphaFold2 and determined by X-ray crystallography. Communications biology 5 (1) (2022)
Justas Dauparas, David Baker, Nathaniel R Bennett, Hua Bai, Robert J Ragotte, Lukas F Milles, Basile I M Wicky, Alexis Courbet, Robbert J de Haas, Neville P Bethel, P J Y Leung, Timothy F Huddy, S Pellock, Doug K Tischer, F Chan, B Koepnick, Hannah Nguyen, Alex Kang, Banumathi Sankaran, Asim K Bera, Neil P King, Julien S Baker
Robust deep learning-based protein sequence design using ProteinMPNN. Science (New York, N.Y.) 378 (6615) (2022)
Gabriela Alvarado, Wilhelm Salmen, Khalil Ettayebi, Liya Hu, Banumathi Sankaran, Mary K Estes, B V Venkataram Prasad, James E Crowe
Broadly cross-reactive human antibodies that inhibit genogroup I and II noroviruses. Nature communications 12 (1) (2021)
Gabriela Alvarado, Wilhelm Salmen, Khalil Ettayebi, Liya Hu, Banumathi Sankaran, Mary K Estes, B V Venkataram Prasad, James E Crowe
Author Correction: Broadly cross-reactive human antibodies that inhibit genogroup I and II noroviruses. Nature communications 12 (1) (2021)
Rajesh Sharma, Kyoung-Jae Choi, My Diem Quan, Sonum Sharma, Banumathi Sankaran, Hyekyung Park, Anel LaGrone, Jean J Kim, Kevin R MacKenzie, Allan Chris M Ferreon, Choel Kim, Josephine C Ferreon
Liquid condensation of reprogramming factor KLF4 with DNA provides a mechanism for chromatin organization. Nature communications 12 (1) (2021)
Dilip Kumar, Xinzhe Yu, Sue E Crawford, Rodolfo Moreno, Joanita Jakana, Banumathi Sankaran, Ramakrishnan Anish, Soni Kaundal, Liya Hu, Mary K Estes, Zhao Wang, B V Venkataram Prasad
2.7 Å cryo-EM structure of rotavirus core protein VP3, a unique capping machine with a helicase activity. Science advances 6 (16) (2020)
Tao Jing, Baoyu Zhao, Pengbiao Xu, Xinsheng Gao, Lei Chi, Huajun Han, Banumathi Sankaran, Pingwei Li
The Structural Basis of IRF-3 Activation upon Phosphorylation. Journal of immunology (Baltimore, Md. : 1950) 205 (7) (2020)
Scott E Boyken, Mark A Benhaim, Florian Busch, Mengxuan Jia, Matthew J Bick, Heejun Choi, Jason C Klima, Zibo Chen, Carl Walkey, Alexander Mileant, Aniruddha Sahasrabuddhe, Kathy Y Wei, Edgar A Hodge, Sarah Byron, Alfredo Quijano-Rubio, Banumathi Sankaran, Neil P King, Jennifer Lippincott-Schwartz, Vicki H Wysocki, Kelly K Lee, Julien S Baker
De novo design of tunable, pH-driven conformational changes. Science (New York, N.Y.) 364 (6441) (2019)