Cytoplasmatic Localization of Six1 in Male Testis and Spermatogonial Stem Cells.
Mingming QinLinzi MaWenjing DuDingyao ChenGuoqun LuoZhaoting LiuPublished in: International journal of stem cells (2024)
Sine oculis homeobox 1 (Six1) is an important factor for embryonic development and carcinoma malignancy. However, the localization of Six1 varies due to protein size and cell types in different organs. In this study, we focus on the expression and localization of Six1 in male reproductive organ via bioinformatics analysis and immunofluorescent detection. The potential interacted proteins with Six1 were also predicted by protein-protein interactions (PPIs) and Enrichr analysis. Bioinformatic data from The Cancer Genome Atlas and Genotype-Tissue Expression project databases showed that SIX1 was highly expressed in normal human testis, but low expressed in the testicular germ cell tumor sample. Human Protein Atlas examination verified that SIX1 level was higher in normal than that in cancer samples. The sub-localization of SIX1 in different reproductive tissues varies but specifically in the cytoplasm and membrane in testicular cells. In mouse cells, single cell RNA-sequencing data analysis indicated that Six1 expression level was higher in mouse spermatogonial stem cells (mSSCs) and differentiating spermatogonial than in other somatic cells. Immunofluorescence staining showed the cytoplasmic localization of Six1 in mouse testis and mSSCs. Further PPIs and Enrichr examination showed the potential interaction of Six1 with bone morphogenetic protein 4 (Bmp4) and catenin Beta-1 (CtnnB1) and stem cell signal pathways. Cytoplasmic localization of Six1 in male testis and mSSCs was probably associated with stem cell related proteins Bmp4 and CtnnB1 for stem cell development.
Keyphrases
- stem cells
- germ cell
- single cell
- induced apoptosis
- poor prognosis
- data analysis
- cell therapy
- cell cycle arrest
- rna seq
- endothelial cells
- binding protein
- papillary thyroid
- mesenchymal stem cells
- oxidative stress
- gene expression
- bone marrow
- epithelial mesenchymal transition
- genome wide
- bioinformatics analysis
- amino acid
- cell death
- magnetic resonance
- computed tomography
- pluripotent stem cells
- deep learning
- squamous cell
- big data
- induced pluripotent stem cells
- protein protein
- loop mediated isothermal amplification
- contrast enhanced