Genetic determinants of micronucleus formation in vivo.
David J AdamsB BarlasR E McIntyreI SalgueroLouise van der WeydenA BarrosJ R VicenteN KarimpourA HaiderM RanzaniG TurnerN A ThompsonV HarleR Olvera-LeónC D Robles-EspinozaAnneliese O SpeakN GeislerW J WeningerStefan H GeyerJ HewinsonN A Karpnull nullB FuF YangZ KozikJyoti Sharma ChoudharyLu YuM S van RuitenBenjamin D RowlandC J LelliottMartin Del Castillo Velasco-HerreraR VerstratenL BrucknerAnton G HenssenM A RooimansJ de LangeT J MohunMark J ArendsK A KentistouP A CoelhoY ZhaoH ZecchiniJohn R B PerryStephen P JacksonGabriel BalmusPublished in: Nature (2024)
Genomic instability arising from defective responses to DNA damage 1 or mitotic chromosomal imbalances 2 can lead to the sequestration of DNA in aberrant extranuclear structures called micronuclei (MN). Although MN are a hallmark of ageing and diseases associated with genomic instability, the catalogue of genetic players that regulate the generation of MN remains to be determined. Here we analyse 997 mouse mutant lines, revealing 145 genes whose loss significantly increases (n = 71) or decreases (n = 74) MN formation, including many genes whose orthologues are linked to human disease. We found that mice null for Dscc1, which showed the most significant increase in MN, also displayed a range of phenotypes characteristic of patients with cohesinopathy disorders. After validating the DSCC1-associated MN instability phenotype in human cells, we used genome-wide CRISPR-Cas9 screening to define synthetic lethal and synthetic rescue interactors. We found that the loss of SIRT1 can rescue phenotypes associated with DSCC1 loss in a manner paralleling restoration of protein acetylation of SMC3. Our study reveals factors involved in maintaining genomic stability and shows how this information can be used to identify mechanisms that are relevant to human disease biology 1 .
Keyphrases
- genome wide
- copy number
- room temperature
- dna damage
- crispr cas
- dna methylation
- transition metal
- endothelial cells
- metal organic framework
- oxidative stress
- induced pluripotent stem cells
- gene expression
- genome editing
- high resolution
- adipose tissue
- cell cycle
- pluripotent stem cells
- metabolic syndrome
- transcription factor
- ischemia reperfusion injury
- cell proliferation
- circulating tumor
- health information
- wild type
- bioinformatics analysis