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A pathway for mitotic chromosome formation.

Johan H GibcusKumiko SamejimaAnton GoloborodkoItaru SamejimaNatalia NaumovaJohannes NueblerMasato T KanemakiLinfeng XieJames R PaulsonWilliam C EarnshawLeonid A MirnyJob Dekker
Published in: Science (New York, N.Y.) (2018)
Mitotic chromosomes fold as compact arrays of chromatin loops. To identify the pathway of mitotic chromosome formation, we combined imaging and Hi-C analysis of synchronous DT40 cell cultures with polymer simulations. Here we show that in prophase, the interphase organization is rapidly lost in a condensin-dependent manner, and arrays of consecutive 60-kilobase (kb) loops are formed. During prometaphase, ~80-kb inner loops are nested within ~400-kb outer loops. The loop array acquires a helical arrangement with consecutive loops emanating from a central "spiral staircase" condensin scaffold. The size of helical turns progressively increases to ~12 megabases during prometaphase. Acute depletion of condensin I or II shows that nested loops form by differential action of the two condensins, whereas condensin II is required for helical winding.
Keyphrases
  • cell cycle
  • high resolution
  • gene expression
  • transcription factor
  • high density
  • dna damage
  • copy number
  • liver failure
  • genome wide
  • dna methylation
  • bone marrow
  • respiratory failure
  • cell proliferation
  • aortic dissection