Structure of the Shaker Kv channel and mechanism of slow C-type inactivation.
Xiao-Feng TanChanhyung BaeRobyn StixAna I Fernández-MariñoKatherine E HufferTsg-Hui ChangJiansen JiangJosé D Faraldo-GómezKenton Jon SwartzPublished in: Science advances (2022)
Voltage-activated potassium (Kv) channels open upon membrane depolarization and proceed to spontaneously inactivate. Inactivation controls neuronal firing rates and serves as a form of short-term memory and is implicated in various human neurological disorders. Here, we use high-resolution cryo-electron microscopy and computer simulations to determine one of the molecular mechanisms underlying this physiologically crucial process. Structures of the activated Shaker Kv channel and of its W434F mutant in lipid bilayers demonstrate that C-type inactivation entails the dilation of the ion selectivity filter and the repositioning of neighboring residues known to be functionally critical. Microsecond-scale molecular dynamics trajectories confirm that these changes inhibit rapid ion permeation through the channel. This long-sought breakthrough establishes how eukaryotic K + channels self-regulate their functional state through the plasticity of their selectivity filters.
Keyphrases
- molecular dynamics
- electron microscopy
- high resolution
- density functional theory
- image quality
- molecular dynamics simulations
- endothelial cells
- dual energy
- mass spectrometry
- minimally invasive
- deep learning
- working memory
- cerebral ischemia
- computed tomography
- induced pluripotent stem cells
- magnetic resonance
- fatty acid
- magnetic resonance imaging
- pluripotent stem cells
- machine learning
- structural basis
- tandem mass spectrometry
- subarachnoid hemorrhage
- brain injury
- monte carlo