One Day in Denmark: Nationwide point-prevalence survey of human bacterial isolates and comparison of classical and whole-genome sequence-based species identification methods.
Ana Rita RebeloTobias IbfeltValeria BortolaiaPimlapas LeekitcharoenphonDennis Schrøder HansenHans Linde NielsenSvend Ellermann-EriksenMichael KempBent Løwe RøderNiels Frimodt-MøllerTurid Snekloth SøndergaardJohn Eugenio CoiaClaus ØstergaardMichael PedersenHenrik Torkil WesthFrank Møller AarestrupPublished in: PloS one (2022)
WGS technologies have the potential to be applied in clinical settings for routine diagnostics purposes. This study also showed that bioinformatics databases should be continuously improved and results from local point-prevalence surveys should not be applied at national levels without previously determining possible regional variations.