Metabolic Responses to Arsenite Exposure Regulated through Histidine Kinases PhoR and AioS in Agrobacterium tumefaciens 5A.
Rachel A RawleMonika Tokmina-LukaszewskaZunji ShiYoon-Suk KangBrian P TripetFang DangGejiao WangTimothy R McDermottValerie CopieBrian BothnerPublished in: Microorganisms (2020)
Arsenite (AsIII) oxidation is a microbially-catalyzed transformation that directly impacts arsenic toxicity, bioaccumulation, and bioavailability in environmental systems. The genes for AsIII oxidation (aio) encode a periplasmic AsIII sensor AioX, transmembrane histidine kinase AioS, and cognate regulatory partner AioR, which control expression of the AsIII oxidase AioBA. The aio genes are under ultimate control of the phosphate stress response via histidine kinase PhoR. To better understand the cell-wide impacts exerted by these key histidine kinases, we employed 1H nuclear magnetic resonance (1H NMR) and liquid chromatography-coupled mass spectrometry (LC-MS) metabolomics to characterize the metabolic profiles of ΔphoR and ΔaioS mutants of Agrobacterium tumefaciens 5A during AsIII oxidation. The data reveals a smaller group of metabolites impacted by the ΔaioS mutation, including hypoxanthine and various maltose derivatives, while a larger impact is observed for the ΔphoR mutation, influencing betaine, glutamate, and different sugars. The metabolomics data were integrated with previously published transcriptomics analyses to detail pathways perturbed during AsIII oxidation and those modulated by PhoR and/or AioS. The results highlight considerable disruptions in central carbon metabolism in the ΔphoR mutant. These data provide a detailed map of the metabolic impacts of AsIII, PhoR, and/or AioS, and inform current paradigms concerning arsenic-microbe interactions and nutrient cycling in contaminated environments.
Keyphrases
- mass spectrometry
- liquid chromatography
- magnetic resonance
- heavy metals
- hydrogen peroxide
- electronic health record
- drinking water
- big data
- single cell
- high resolution
- high resolution mass spectrometry
- poor prognosis
- transcription factor
- gas chromatography
- magnetic resonance imaging
- electron transfer
- oxidative stress
- cell therapy
- capillary electrophoresis
- bioinformatics analysis
- high intensity
- machine learning
- computed tomography
- randomized controlled trial
- tandem mass spectrometry
- risk assessment
- tyrosine kinase
- health risk
- gene expression
- simultaneous determination
- room temperature
- climate change
- long non coding rna
- dna methylation
- solid phase extraction
- artificial intelligence
- protein kinase
- contrast enhanced