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Magnetique: an interactive web application to explore transcriptome signatures of heart failure.

Thiago Britto-BorgesAnnekathrin LudtEtienne BoileauEnio GjergaFederico MariniChristoph Dieterich
Published in: Journal of translational medicine (2022)
Magnetique ( https://shiny.dieterichlab.org/app/magnetique ) is the first online application to provide an interactive view of the HF transcriptome at the RNA isoform level and to include transcription factor signaling and RBP:RNA interaction networks. The source code for both the analyses ( https://github.com/dieterich-lab/magnetiqueCode2022 ) and the web application ( https://github.com/AnnekathrinSilvia/magnetique ) is available to the public. We hope that our application will help users to uncover the molecular basis of heart failure.
Keyphrases
  • heart failure
  • transcription factor
  • genome wide
  • gene expression
  • single cell
  • left ventricular
  • rna seq
  • emergency department
  • acute heart failure
  • atrial fibrillation
  • social media