Genome-Wide Profiling of Exosomal Long Noncoding RNAs Following Air Pollution Exposure: A Randomized, Crossover Trial.
Xihao DuYixuan JiangQingli ZhangXinlei ZhuYang ZhangCong LiuYue NiuJing CaiHaidong KanRenjie ChenPublished in: Environmental science & technology (2023)
Changes in human genome-wide long noncoding RNAs (lncRNAs) associated with air pollution are unknown. This study aimed to investigate the effect of air pollution on human exosomal lncRNAs. A randomized, crossover trial was conducted among 35 healthy adults. Participants were allocated to 4 h exposure in road (high air pollution) and park (low air pollution) sessions in random order with a 2 week washout period. RNA sequencing was performed to measure lncRNAs. Differential lncRNAs were identified using a linear mixed-effect model. Mean concentrations of air pollutants such as ultrafine particles (UFP), black carbon (BC), carbon monoxide (CO), and nitrogen dioxide (NO 2 ) were 2-3 times higher in the road than those in the park. Fifty-five lncRNAs [false discovery rate (FDR) < 0.05] including lncRNA NORAD, MALAT1, and H19 were changed in response to air pollution exposure. We found that 54 lncRNAs were associated with CO, 49 lncRNAs with UFP, 49 lncRNAs with BC, 48 lncRNAs with NO 2 , and 4 lncRNAs with PM 2.5 (FDR < 0.05). These differential lncRNAs participated in dozens of pathways including cardiovascular signaling, epithelial cell proliferation, inflammation, and transforming growth factor. This trial for the first time profiled changes of human exosomal lncRNAs following air pollution. Our findings revealed multiple biological processes moderated by lncRNAs and provided epigenetic insights into cardiovascular effects of air pollution.
Keyphrases
- air pollution
- particulate matter
- network analysis
- genome wide analysis
- genome wide identification
- lung function
- endothelial cells
- genome wide
- cell proliferation
- dna methylation
- transforming growth factor
- clinical trial
- study protocol
- randomized controlled trial
- small molecule
- transcription factor
- open label
- epithelial mesenchymal transition
- long noncoding rna
- pluripotent stem cells
- signaling pathway