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Low mutation rate in epaulette sharks is consistent with a slow rate of evolution in sharks.

Ashley T Sendell-PriceFrank J TulenkoMats E PetterssonKang DuMargo MontandonSylke WinklerKathleen KulbGavin P NaylorAdam M PhillippyOlivier FedrigoJacquelyn MountcastleJennifer R BalaccoAmalia DutraRebecca E DaleBettina HaaseErich D JarvisEugene W MyersJason W SinclairPeter David CurrieLeif AnderssonManfred Schartl
Published in: Nature communications (2023)
Sharks occupy diverse ecological niches and play critical roles in marine ecosystems, often acting as apex predators. They are considered a slow-evolving lineage and have been suggested to exhibit exceptionally low cancer rates. These two features could be explained by a low nuclear mutation rate. Here, we provide a direct estimate of the nuclear mutation rate in the epaulette shark (Hemiscyllium ocellatum). We generate a high-quality reference genome, and resequence the whole genomes of parents and nine offspring to detect de novo mutations. Using stringent criteria, we estimate a mutation rate of 7×10 -10 per base pair, per generation. This represents one of the lowest directly estimated mutation rates for any vertebrate clade, indicating that this basal vertebrate group is indeed a slowly evolving lineage whose ability to restore genetic diversity following a sustained population bottleneck may be hampered by a low mutation rate.
Keyphrases
  • genetic diversity
  • climate change
  • squamous cell carcinoma
  • gene expression
  • metabolic syndrome
  • adipose tissue
  • dna methylation
  • human health