Erich D Jarvis (Erich Jarvis)

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 88

Top Topics

Quality Control

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

Scientific data

Nature ecology & evolution

This page only lists publications with an associated author ORCID identifier.

Publications

Jean-Nicolas Audet, Mélanie Couture, Louis Lefebvre, Erich D Jarvis
Problem-solving skills are predicted by technical innovations in the wild and brain size in passerines. Nature ecology & evolution 8 (4) (2024)
Jean-Nicolas Audet, Mélanie Couture, Louis Lefebvre, Erich D Jarvis
Problem-solving skills are predicted by technical innovations in the wild and brain size in passerines. Nature ecology & evolution 8 (4) (2024)
Anoushka Joglekar, Wen Hu, Bei Zhang, Oleksandr Narykov, Mark E Diekhans, Jordan Marrocco, Jennifer Balacco, Lishomwa C Ndhlovu, Teresa A Milner, Olivier Fedrigo, Erich D Jarvis, Gloria M Sheynkman, Dmitry Korkin, Margaret Elizabeth Ross, Hagen U Tilgner
Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain. Nature neuroscience (2024)
Delphine Larivière, Linelle Abueg, Nadolina Brajuka, Cristóbal Gallardo-Alba, Bjoern Andreas Gruening, Byung June Ko, Alex Ostrovsky, Marc Palmada-Flores, Brandon D Pickett, Keon Rabbani, Agostinho Antunes, Jennifer R Balacco, Mark J P Chaisson, Haoyu Cheng, Joanna Collins, Melanie Couture, Alexandra A Denisova, Olivier Fedrigo, Guido Roberto Gallo, Alice Maria Giani, Grenville MacDonald Gooder, Kathleen Horan, Nivesh Jain, Cassidy Johnson, Heebal Kim, Chul Lee, Tomas Marques-Bonet, Brian O'Toole, Arang Rhie, Simona Secomandi, Marcella Sozzoni, Tatiana Tilley, Marcela Uliano-Silva, Marius van den Beek, Robert W Williams, Robert M Waterhouse, Adam M Phillippy, Erich D Jarvis, Michael C Schatz, Anton Nekrutenko, Giulio Formenti
Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy. Nature biotechnology (2024)
Siavash Mirarab, Iker Rivas-González, Shaohong Feng, Josefin Stiller, Qi Fang, Uyen Mai, Glenn Hickey, Guangii Chen, Nadolina Brajuka, Olivier Fedrigo, Giulio Formenti, Jochen B W Wolf, Kerstin Howe, Agostinho Antunes, Mikkel Heide Schierup, Benedict Paten, Erich D Jarvis, Guojie Zhang, Edward L Braun
A region of suppressed recombination misleads neoavian phylogenomics. Proceedings of the National Academy of Sciences of the United States of America 121 (15) (2024)
Anoushka Joglekar, Wen Hu, Bei Zhang, Oleksandr Narykov, Mark E Diekhans, Jordan Marrocco, Jennifer Balacco, Lishomwa C Ndhlovu, Teresa A Milner, Olivier Fedrigo, Erich D Jarvis, Gloria M Sheynkman, Dmitry Korkin, Margaret Elizabeth Ross, Hagen U Tilgner
Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain. Nature neuroscience 27 (6) (2024)
Delphine Larivière, Linelle Abueg, Nadolina Brajuka, Cristóbal Gallardo-Alba, Bjoern Andreas Gruening, Byung June Ko, Alex Ostrovsky, Marc Palmada-Flores, Brandon D Pickett, Keon Rabbani, Agostinho Antunes, Jennifer R Balacco, Mark J P Chaisson, Haoyu Cheng, Joanna Collins, Melanie Couture, Alexandra A Denisova, Olivier Fedrigo, Guido Roberto Gallo, Alice Maria Giani, Grenville MacDonald Gooder, Kathleen Horan, Nivesh Jain, Cassidy Johnson, Heebal Kim, Chul Lee, Tomas Marques-Bonet, Brian O'Toole, Arang Rhie, Simona Secomandi, Marcella Sozzoni, Tatiana Tilley, Marcela Uliano-Silva, Marius van den Beek, Robert W Williams, Robert M Waterhouse, Adam M Phillippy, Erich D Jarvis, Michael C Schatz, Anton Nekrutenko, Giulio Formenti
Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy. Nature biotechnology 42 (3) (2024)
Anoushka Joglekar, Wen Hu, Bei Zhang, Oleksandr Narykov, Mark E Diekhans, Jordan Marrocco, Jennifer Balacco, Lishomwa C Ndhlovu, Teresa A Milner, Olivier Fedrigo, Erich D Jarvis, Gloria M Sheynkman, Dmitry Korkin, Margaret Elizabeth Ross, Hagen U Tilgner
Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain. Nature neuroscience 27 (6) (2024)
Jean-Nicolas Audet, Mélanie Couture, Louis Lefebvre, Erich D Jarvis
Problem-solving skills are predicted by technical innovations in the wild and brain size in passerines. Nature ecology & evolution 8 (4) (2024)
Siavash Mirarab, Iker Rivas-González, Shaohong Feng, Josefin Stiller, Qi Fang, Uyen Mai, Glenn Hickey, Guangii Chen, Nadolina Brajuka, Olivier Fedrigo, Giulio Formenti, Jochen B W Wolf, Kerstin Howe, Agostinho Antunes, Mikkel Heide Schierup, Benedict Paten, Erich D Jarvis, Guojie Zhang, Edward L Braun
A region of suppressed recombination misleads neoavian phylogenomics. Proceedings of the National Academy of Sciences of the United States of America 121 (15) (2024)
Jean-Nicolas Audet, Mélanie Couture, Louis Lefebvre, Erich D Jarvis
Problem-solving skills are predicted by technical innovations in the wild and brain size in passerines. Nature ecology & evolution (2024)
Siavash Mirarab, Iker Rivas-González, Shaohong Feng, Josefin Stiller, Qi Fang, Uyen Mai, Glenn Hickey, Guangii Chen, Nadolina Brajuka, Olivier Fedrigo, Giulio Formenti, Jochen B W Wolf, Kerstin Howe, Agostinho Antunes, Mikkel Heide Schierup, Benedict Paten, Erich D Jarvis, Guojie Zhang, Edward L Braun
A region of suppressed recombination misleads neoavian phylogenomics. Proceedings of the National Academy of Sciences of the United States of America 121 (15) (2024)
Siavash Mirarab, Iker Rivas-González, Shaohong Feng, Josefin Stiller, Qi Fang, Uyen Mai, Glenn Hickey, Guangii Chen, Nadolina Brajuka, Olivier Fedrigo, Giulio Formenti, Jochen B W Wolf, Kerstin Howe, Agostinho Antunes, Mikkel Heide Schierup, Benedict Paten, Erich D Jarvis, Guojie Zhang, Edward L Braun
A region of suppressed recombination misleads neoavian phylogenomics. Proceedings of the National Academy of Sciences of the United States of America 121 (15) (2024)
Dorothy Nevé Baker, Linelle Abueg, Merly Escalona, Katherine A Farquharson, Janet M Lanyon, Diana Le Duc, Torsten Schöneberg, Dominic Absolon, Ying Sims, Olivier Fedrigo, Erich D Jarvis, Katherine Belov, Carolyn J Hogg, Joshua D Kapp
A chromosome-level genome assembly for the dugong (Dugong dugon). The Journal of heredity 115 (2) (2024)
Yury V Bukhman, Susanne Meyer, Li-Fang Chu, Linelle Abueg, Jessica Antosiewicz-Bourget, Jennifer Balacco, Michael Brecht, Erica Dinatale, Olivier Fedrigo, Giulio Formenti, Arkarachai Fungtammasan, Swagarika Jaharlal Giri, Michael Hiller, Kerstin Howe, Daisuke Kihara, Daniel Mamott, Jacquelyn Mountcastle, Sarah Pelan, Keon Rabbani, Ying Sims, Alan Tracey, Jonathan M D Wood, Erich D Jarvis, James A Thomson, Mark J P Chaisson, Ron Stewart
Chromosome level genome assembly of the Etruscan shrew Suncus etruscus. Scientific data 11 (1) (2024)
Anoushka Joglekar, Wen Hu, Bei Zhang, Oleksandr Narykov, Mark E Diekhans, Jordan Marrocco, Jennifer Balacco, Lishomwa C Ndhlovu, Teresa A Milner, Olivier Fedrigo, Erich D Jarvis, Gloria M Sheynkman, Dmitry Korkin, Margaret Elizabeth Ross, Hagen U Tilgner
Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain. Nature neuroscience 27 (6) (2024)
Yury V Bukhman, Susanne Meyer, Li-Fang Chu, Linelle Abueg, Jessica Antosiewicz-Bourget, Jennifer Balacco, Michael Brecht, Erica Dinatale, Olivier Fedrigo, Giulio Formenti, Arkarachai Fungtammasan, Swagarika Jaharlal Giri, Michael Hiller, Kerstin Howe, Daisuke Kihara, Daniel Mamott, Jacquelyn Mountcastle, Sarah Pelan, Keon Rabbani, Ying Sims, Alan Tracey, Jonathan M D Wood, Erich D Jarvis, James A Thomson, Mark J P Chaisson, Ron Stewart
Chromosome level genome assembly of the Etruscan shrew Suncus etruscus. Scientific data 11 (1) (2024)
Anoushka Joglekar, Wen Hu, Bei Zhang, Oleksandr Narykov, Mark E Diekhans, Jordan Marrocco, Jennifer Balacco, Lishomwa C Ndhlovu, Teresa A Milner, Olivier Fedrigo, Erich D Jarvis, Gloria M Sheynkman, Dmitry Korkin, Margaret Elizabeth Ross, Hagen U Tilgner
Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain. Nature neuroscience (2024)
Justin Merondun, Cristiana I Marques, Pedro Andrade, Swetlana Meshcheryagina, Ismael Galván, Sandra Afonso, Joel M Alves, Pedro Miguel Araújo, Gennadiy Bachurin, Jennifer Balacco, Miklós Bán, Olivier Fedrigo, Giulio Formenti, Frode Fossøy, Attila Fülöp, Mikhail Golovatin, Sofia Granja, Chris M Hewson, Marcel Honza, Kerstin Howe, Greger Larson, Attila Marton, Csaba Moskát, Jacquelyn Mountcastle, Petr Procházka, Yaroslav A Red'kin, Ying Sims, Michal Šulc, Alan Tracey, Jonathan M D Wood, Erich D Jarvis, Mark E Hauber, Miguel Carneiro, Jochen B W Wolf
Evolution and genetic architecture of sex-limited polymorphism in cuckoos. Science advances 10 (17) (2024)
Anoushka Joglekar, Wen Hu, Bei Zhang, Oleksandr Narykov, Mark E Diekhans, Jordan Marrocco, Jennifer Balacco, Lishomwa C Ndhlovu, Teresa A Milner, Olivier Fedrigo, Erich D Jarvis, Gloria M Sheynkman, Dmitry Korkin, Margaret Elizabeth Ross, Hagen U Tilgner
Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain. Nature neuroscience (2024)
Delphine Larivière, Linelle Abueg, Nadolina Brajuka, Cristóbal Gallardo-Alba, Bjoern Andreas Gruening, Byung June Ko, Alex Ostrovsky, Marc Palmada-Flores, Brandon D Pickett, Keon Rabbani, Agostinho Antunes, Jennifer R Balacco, Mark J P Chaisson, Haoyu Cheng, Joanna Collins, Melanie Couture, Alexandra A Denisova, Olivier Fedrigo, Guido Roberto Gallo, Alice Maria Giani, Grenville MacDonald Gooder, Kathleen Horan, Nivesh Jain, Cassidy Johnson, Heebal Kim, Chul Lee, Tomas Marques-Bonet, Brian O'Toole, Arang Rhie, Simona Secomandi, Marcella Sozzoni, Tatiana Tilley, Marcela Uliano-Silva, Marius van den Beek, Robert W Williams, Robert M Waterhouse, Adam M Phillippy, Erich D Jarvis, Michael C Schatz, Anton Nekrutenko, Giulio Formenti
Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy. Nature biotechnology (2024)
Jean-Nicolas Audet, Mélanie Couture, Louis Lefebvre, Erich D Jarvis
Problem-solving skills are predicted by technical innovations in the wild and brain size in passerines. Nature ecology & evolution 8 (4) (2024)
Yury V Bukhman, Susanne Meyer, Li-Fang Chu, Linelle Abueg, Jessica Antosiewicz-Bourget, Jennifer Balacco, Michael Brecht, Erica Dinatale, Olivier Fedrigo, Giulio Formenti, Arkarachai Fungtammasan, Swagarika Jaharlal Giri, Michael Hiller, Kerstin Howe, Daisuke Kihara, Daniel Mamott, Jacquelyn Mountcastle, Sarah Pelan, Keon Rabbani, Ying Sims, Alan Tracey, Jonathan M D Wood, Erich D Jarvis, James A Thomson, Mark J P Chaisson, Ron Stewart
Chromosome level genome assembly of the Etruscan shrew Suncus etruscus. Scientific data 11 (1) (2024)
Matteo Sebastianelli, Sifiso M Lukhele, Simona Secomandi, Stacey G de Souza, Bettina Haase, Michaella Moysi, Christos Nikiforou, Alexander Hutfluss, Jacquelyn Mountcastle, Jennifer Balacco, Sarah Pelan, William Chow, Olivier Fedrigo, Colleen T Downs, Ara Monadjem, Niels Jeroen Dingemanse, Erich D Jarvis, Alan Brelsford, Bridgett M vonHoldt, Alexander N G Kirschel
A genomic basis of vocal rhythm in birds. Nature communications 15 (1) (2024)
Justin Merondun, Cristiana I Marques, Pedro Andrade, Swetlana Meshcheryagina, Ismael Galván, Sandra Afonso, Joel M Alves, Pedro Miguel Araújo, Gennadiy Bachurin, Jennifer Balacco, Miklós Bán, Olivier Fedrigo, Giulio Formenti, Frode Fossøy, Attila Fülöp, Mikhail Golovatin, Sofia Granja, Chris M Hewson, Marcel Honza, Kerstin Howe, Greger Larson, Attila Marton, Csaba Moskát, Jacquelyn Mountcastle, Petr Procházka, Yaroslav A Red'kin, Ying Sims, Michal Šulc, Alan Tracey, Jonathan M D Wood, Erich D Jarvis, Mark E Hauber, Miguel Carneiro, Jochen B W Wolf
Evolution and genetic architecture of sex-limited polymorphism in cuckoos. Science advances 10 (17) (2024)
Yury V Bukhman, Susanne Meyer, Li-Fang Chu, Linelle Abueg, Jessica Antosiewicz-Bourget, Jennifer Balacco, Michael Brecht, Erica Dinatale, Olivier Fedrigo, Giulio Formenti, Arkarachai Fungtammasan, Swagarika Jaharlal Giri, Michael Hiller, Kerstin Howe, Daisuke Kihara, Daniel Mamott, Jacquelyn Mountcastle, Sarah Pelan, Keon Rabbani, Ying Sims, Alan Tracey, Jonathan M D Wood, Erich D Jarvis, James A Thomson, Mark J P Chaisson, Ron Stewart
Chromosome level genome assembly of the Etruscan shrew Suncus etruscus. Scientific data 11 (1) (2024)
Matteo Sebastianelli, Sifiso M Lukhele, Simona Secomandi, Stacey G de Souza, Bettina Haase, Michaella Moysi, Christos Nikiforou, Alexander Hutfluss, Jacquelyn Mountcastle, Jennifer Balacco, Sarah Pelan, William Chow, Olivier Fedrigo, Colleen T Downs, Ara Monadjem, Niels Jeroen Dingemanse, Erich D Jarvis, Alan Brelsford, Bridgett M vonHoldt, Alexander N G Kirschel
A genomic basis of vocal rhythm in birds. Nature communications 15 (1) (2024)
Yury V Bukhman, Susanne Meyer, Li-Fang Chu, Linelle Abueg, Jessica Antosiewicz-Bourget, Jennifer Balacco, Michael Brecht, Erica Dinatale, Olivier Fedrigo, Giulio Formenti, Arkarachai Fungtammasan, Swagarika Jaharlal Giri, Michael Hiller, Kerstin Howe, Daisuke Kihara, Daniel Mamott, Jacquelyn Mountcastle, Sarah Pelan, Keon Rabbani, Ying Sims, Alan Tracey, Jonathan M D Wood, Erich D Jarvis, James A Thomson, Mark J P Chaisson, Ron Stewart
Chromosome level genome assembly of the Etruscan shrew Suncus etruscus. Scientific data 11 (1) (2024)
Yury V Bukhman, Susanne Meyer, Li-Fang Chu, Linelle Abueg, Jessica Antosiewicz-Bourget, Jennifer Balacco, Michael Brecht, Erica Dinatale, Olivier Fedrigo, Giulio Formenti, Arkarachai Fungtammasan, Swagarika Jaharlal Giri, Michael Hiller, Kerstin Howe, Daisuke Kihara, Daniel Mamott, Jacquelyn Mountcastle, Sarah Pelan, Keon Rabbani, Ying Sims, Alan Tracey, Jonathan M D Wood, Erich D Jarvis, James A Thomson, Mark J P Chaisson, Ron Stewart
Chromosome level genome assembly of the Etruscan shrew Suncus etruscus. Scientific data 11 (1) (2024)
DongAhn Yoo, Arang Rhie, Prajna Hebbar, Francesca Antonacci, Glennis A Logsdon, Steven Jared Solar, Dmitry Antipov, Brandon D Pickett, Yana Safonova, Francesco Montinaro, Yanting Luo, Joanna Malukiewicz, Jessica M Storer, Jiadong Lin, Abigail N Sequeira, Riley J Mangan, Glenn Hickey, Graciela Monfort Anez, Parithi Balachandran, Anton Bankevich, Christine R Beck, Arjun Biddanda, Matthew Borchers, Gerard G Bouffard, Emry Brannan, Shelise Y Brooks, Lucia Carbone, Laura Carrel, Yongwook Choi, Juyun Crawford, Mark Diekhans, Eric Engelbrecht, Cedric Feschotte, Giulio Formenti, Gage H Garcia, Luciana de Gennaro, David M Gilbert, Richard E Green, Andrea Guarracino, Ishaan Gupta, Diana Haddad, Junmin Han, Robert S Harris, Gabrielle A Hartley, William T Harvey, Michael Hiller, Kendra Hoekzema, Marlys L Houck, Hyeonsoo Jeong, Kaivan Kamali, Manolis Kellis, Bryce Kille, Chul Lee, Youngho Lee, William D Lees, Alexandra P Lewis, Qiuhui Li, Mark Loftus, Yong Hwee Eddie Loh, Hailey Loucks, Jian Ma, Yafei Mao, Juan F I Martinez, Patrick Masterson, Rajiv C McCoy, Barbara McGrath, Sean McKinney, Britta S Meyer, Karen H Miga, Saswat Kumar Mohanty, Katherine M Munson, Karol Pal, Matthew W Pennell, Pavel A Pevzner, David Porubsky, Tamara Potapova, Francisca R Ringeling, Joana L Rocha, Oliver A Ryder, Samuel Sacco, Swati Saha, Takayo Sasaki, Michael C Schatz, Nicholas J Schork, Cole Shanks, Linnéa Smeds, Dongmin R Son, Cynthia Steiner, Alexander P Sweeten, Michael G Tassia, Françoise Thibaud-Nissen, Edmundo Torres-González, Mihir Trivedi, Wenjie Wei, Julie Wertz, Muyu Yang, Panpan Zhang, Shilong Zhang, Yang Zhang, Zhenmiao Zhang, Sarah A Zhao, Yixin Zhu, Erich D Jarvis, Jennifer L Gerton, Iker Rivas-González, Benedict Paten, Zachary Alfano Szpiech, Christian D Huber, Tobias L Lenz, Miriam K Konkel, Soojin V Yi, Stefan Canzar, Corey T Watson, Peter H Sudmant, Erin K Molloy, Erik Garrison, Craig B Lowe, Mario Ventura, Rachel J O'Neill, Sergey Koren, Kateryna D Makova, Adam M Phillippy, Evan E Eichler
Complete sequencing of ape genomes. bioRxiv : the preprint server for biology (2024)
Jean-Nicolas Audet, Mélanie Couture, Louis Lefebvre, Erich D Jarvis
Problem-solving skills are predicted by technical innovations in the wild and brain size in passerines. Nature ecology & evolution 8 (4) (2024)
Delphine Larivière, Linelle Abueg, Nadolina Brajuka, Cristóbal Gallardo-Alba, Bjoern Andreas Gruening, Byung June Ko, Alex Ostrovsky, Marc Palmada-Flores, Brandon D Pickett, Keon Rabbani, Agostinho Antunes, Jennifer R Balacco, Mark J P Chaisson, Haoyu Cheng, Joanna Collins, Melanie Couture, Alexandra A Denisova, Olivier Fedrigo, Guido Roberto Gallo, Alice Maria Giani, Grenville MacDonald Gooder, Kathleen Horan, Nivesh Jain, Cassidy Johnson, Heebal Kim, Chul Lee, Tomas Marques-Bonet, Brian O'Toole, Arang Rhie, Simona Secomandi, Marcella Sozzoni, Tatiana Tilley, Marcela Uliano-Silva, Marius van den Beek, Robert W Williams, Robert M Waterhouse, Adam M Phillippy, Erich D Jarvis, Michael C Schatz, Anton Nekrutenko, Giulio Formenti
Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy. Nature biotechnology 42 (3) (2024)
Dorothy Nevé Baker, Linelle Abueg, Merly Escalona, Katherine A Farquharson, Janet M Lanyon, Diana Le Duc, Torsten Schöneberg, Dominic Absolon, Ying Sims, Olivier Fedrigo, Erich D Jarvis, Katherine Belov, Carolyn J Hogg, Joshua D Kapp
A chromosome-level genome assembly for the dugong (Dugong dugon). The Journal of heredity 115 (2) (2024)
Yury V Bukhman, Susanne Meyer, Li-Fang Chu, Linelle Abueg, Jessica Antosiewicz-Bourget, Jennifer Balacco, Michael Brecht, Erica Dinatale, Olivier Fedrigo, Giulio Formenti, Arkarachai Fungtammasan, Swagarika Jaharlal Giri, Michael Hiller, Kerstin Howe, Daisuke Kihara, Daniel Mamott, Jacquelyn Mountcastle, Sarah Pelan, Keon Rabbani, Ying Sims, Alan Tracey, Jonathan M D Wood, Erich D Jarvis, James A Thomson, Mark J P Chaisson, Ron Stewart
Chromosome level genome assembly of the Etruscan shrew Suncus etruscus. Scientific data 11 (1) (2024)
Siavash Mirarab, Iker Rivas-González, Shaohong Feng, Josefin Stiller, Qi Fang, Uyen Mai, Glenn Hickey, Guangii Chen, Nadolina Brajuka, Olivier Fedrigo, Giulio Formenti, Jochen B W Wolf, Kerstin Howe, Agostinho Antunes, Mikkel Heide Schierup, Benedict Paten, Erich D Jarvis, Guojie Zhang, Edward L Braun
A region of suppressed recombination misleads neoavian phylogenomics. Proceedings of the National Academy of Sciences of the United States of America 121 (15) (2024)
Matteo Sebastianelli, Sifiso M Lukhele, Simona Secomandi, Stacey G de Souza, Bettina Haase, Michaella Moysi, Christos Nikiforou, Alexander Hutfluss, Jacquelyn Mountcastle, Jennifer Balacco, Sarah Pelan, William Chow, Olivier Fedrigo, Colleen T Downs, Ara Monadjem, Niels Jeroen Dingemanse, Erich D Jarvis, Alan Brelsford, Bridgett M vonHoldt, Alexander N G Kirschel
A genomic basis of vocal rhythm in birds. Nature communications 15 (1) (2024)
DongAhn Yoo, Arang Rhie, Prajna Hebbar, Francesca Antonacci, Glennis A Logsdon, Steven Jared Solar, Dmitry Antipov, Brandon D Pickett, Yana Safonova, Francesco Montinaro, Yanting Luo, Joanna Malukiewicz, Jessica M Storer, Jiadong Lin, Abigail N Sequeira, Riley J Mangan, Glenn Hickey, Graciela Monfort Anez, Parithi Balachandran, Anton Bankevich, Christine R Beck, Arjun Biddanda, Matthew Borchers, Gerard G Bouffard, Emry Brannan, Shelise Y Brooks, Lucia Carbone, Laura Carrel, Yongwook Choi, Juyun Crawford, Mark Diekhans, Eric Engelbrecht, Cedric Feschotte, Giulio Formenti, Gage H Garcia, Luciana de Gennaro, David M Gilbert, Richard E Green, Andrea Guarracino, Ishaan Gupta, Diana Haddad, Junmin Han, Robert S Harris, Gabrielle A Hartley, William T Harvey, Michael Hiller, Kendra Hoekzema, Marlys L Houck, Hyeonsoo Jeong, Kaivan Kamali, Manolis Kellis, Bryce Kille, Chul Lee, Youngho Lee, William D Lees, Alexandra P Lewis, Qiuhui Li, Mark Loftus, Yong Hwee Eddie Loh, Hailey Loucks, Jian Ma, Yafei Mao, Juan F I Martinez, Patrick Masterson, Rajiv C McCoy, Barbara McGrath, Sean McKinney, Britta S Meyer, Karen H Miga, Saswat Kumar Mohanty, Katherine M Munson, Karol Pal, Matthew W Pennell, Pavel A Pevzner, David Porubsky, Tamara Potapova, Francisca R Ringeling, Joana L Rocha, Oliver A Ryder, Samuel Sacco, Swati Saha, Takayo Sasaki, Michael C Schatz, Nicholas J Schork, Cole Shanks, Linnéa Smeds, Dongmin R Son, Cynthia Steiner, Alexander P Sweeten, Michael G Tassia, Françoise Thibaud-Nissen, Edmundo Torres-González, Mihir Trivedi, Wenjie Wei, Julie Wertz, Muyu Yang, Panpan Zhang, Shilong Zhang, Yang Zhang, Zhenmiao Zhang, Sarah A Zhao, Yixin Zhu, Erich D Jarvis, Jennifer L Gerton, Iker Rivas-González, Benedict Paten, Zachary Alfano Szpiech, Christian D Huber, Tobias L Lenz, Miriam K Konkel, Soojin V Yi, Stefan Canzar, Corey T Watson, Peter H Sudmant, Erin K Molloy, Erik Garrison, Craig B Lowe, Mario Ventura, Rachel J O'Neill, Sergey Koren, Kateryna D Makova, Adam M Phillippy, Evan E Eichler
Complete sequencing of ape genomes. bioRxiv : the preprint server for biology (2024)
Anoushka Joglekar, Wen Hu, Bei Zhang, Oleksandr Narykov, Mark E Diekhans, Jordan Marrocco, Jennifer Balacco, Lishomwa C Ndhlovu, Teresa A Milner, Olivier Fedrigo, Erich D Jarvis, Gloria M Sheynkman, Dmitry Korkin, Margaret Elizabeth Ross, Hagen U Tilgner
Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain. Nature neuroscience 27 (6) (2024)
Siavash Mirarab, Iker Rivas-González, Shaohong Feng, Josefin Stiller, Qi Fang, Uyen Mai, Glenn Hickey, Guangii Chen, Nadolina Brajuka, Olivier Fedrigo, Giulio Formenti, Jochen B W Wolf, Kerstin Howe, Agostinho Antunes, Mikkel Heide Schierup, Benedict Paten, Erich D Jarvis, Guojie Zhang, Edward L Braun
A region of suppressed recombination misleads neoavian phylogenomics. Proceedings of the National Academy of Sciences of the United States of America 121 (15) (2024)
Zhen Huang, Luohao Xu, Cheng Cai, Yitao Zhou, Jing Liu, Zaoxu Xu, Zexian Zhu, Wen Kang, Wan Cen, Surui Pei, Duo Chen, Chenggang Shi, Xiaotong Wu, Yongji Huang, Chaohua Xu, Yanan Yan, Ying Yang, Ting Xue, Wenjin He, Xuefeng Hu, Yanding Zhang, Youqiang Chen, Changwei Bi, Chunpeng He, Lingzhan Xue, Shijun Xiao, Zhicao Yue, Yu Jiang, Jr-Kai Yu, Erich D Jarvis, Guang Li, Gang Lin, Qiujin Zhang, Qi Zhou
Three amphioxus reference genomes reveal gene and chromosome evolution of chordates. Proceedings of the National Academy of Sciences of the United States of America 120 (10) (2023)
Constantina Theofanopoulou, Erich D Jarvis
Reply to: The case for standardizing gene nomenclature in vertebrates. Nature 614 (7948) (2023)
Constantina Theofanopoulou, Erich D Jarvis
Reply to: The case for standardizing gene nomenclature in vertebrates. Nature 614 (7948) (2023)
Zhen Huang, Luohao Xu, Cheng Cai, Yitao Zhou, Jing Liu, Zaoxu Xu, Zexian Zhu, Wen Kang, Wan Cen, Surui Pei, Duo Chen, Chenggang Shi, Xiaotong Wu, Yongji Huang, Chaohua Xu, Yanan Yan, Ying Yang, Ting Xue, Wenjin He, Xuefeng Hu, Yanding Zhang, Youqiang Chen, Changwei Bi, Chunpeng He, Lingzhan Xue, Shijun Xiao, Zhicao Yue, Yu Jiang, Jr-Kai Yu, Erich D Jarvis, Guang Li, Gang Lin, Qiujin Zhang, Qi Zhou
Three amphioxus reference genomes reveal gene and chromosome evolution of chordates. Proceedings of the National Academy of Sciences of the United States of America 120 (10) (2023)
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A draft human pangenome reference. Nature 617 (7960) (2023)
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Constantina Theofanopoulou, Erich D Jarvis
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Balanced imitation sustains song culture in zebra finches. Nature communications 12 (1) (2021)
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Evolutionary and biomedical insights from a marmoset diploid genome assembly. Nature 594 (7862) (2021)
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As above, so below: Whole transcriptome profiling demonstrates strong molecular similarities between avian dorsal and ventral pallial subdivisions. The Journal of comparative neurology 529 (12) (2021)
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Controlling for activity-dependent genes and behavioral states is critical for determining brain relationships within and across species. The Journal of comparative neurology 529 (12) (2021)
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Universal nomenclature for oxytocin-vasotocin ligand and receptor families. Nature 592 (7856) (2021)
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Reference genome and demographic history of the most endangered marine mammal, the vaquita. Molecular ecology resources 21 (4) (2020)
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Six reference-quality genomes reveal evolution of bat adaptations. Nature 583 (7817) (2020)
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Evolution of vocal learning and spoken language. Science (New York, N.Y.) 366 (6461) (2019)
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Listening in. eLife 4 (2015)